RNA–Protein interactions for RNA: ENST00000584645.1

LIMD2-212, Transcript of LIM domain containing 2, humanhuman

TSL 3

Gene LIMD2, Length 566 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMD2-212ENST00000584645 ABCF1Q8NE71 845 aaKnown RBP eCLIP24.83■■□□□ 1.57
LIMD2-212ENST00000584645 CHGAP10645 457 aaKnown RBP24.81■■□□□ 1.56
LIMD2-212ENST00000584645 NWD1Q149M9 1564 aa24.8■■□□□ 1.56
LIMD2-212ENST00000584645 TOM1O60784 492 aa24.79■■□□□ 1.56
LIMD2-212ENST00000584645 PPP1R15AO75807 674 aaPredicted RBP24.79■■□□□ 1.56
LIMD2-212ENST00000584645 TRIM52Q96A61 297 aa24.79■■□□□ 1.56
LIMD2-212ENST00000584645 DIP2AQ14689 1571 aa24.78■■□□□ 1.56
LIMD2-212ENST00000584645 ACIN1Q9UKV3 1341 aaKnown RBP24.78■■□□□ 1.56
LIMD2-212ENST00000584645 CLTCL1P53675 1640 aa24.78■■□□□ 1.56
LIMD2-212ENST00000584645 KCNA6P17658 529 aa24.76■■□□□ 1.55
LIMD2-212ENST00000584645 NKTRP30414 1462 aaKnown RBP24.76■■□□□ 1.55
LIMD2-212ENST00000584645 KIF1BO60333 1816 aa24.75■■□□□ 1.55
LIMD2-212ENST00000584645 SLC26A8Q96RN1 970 aa24.75■■□□□ 1.55
LIMD2-212ENST00000584645 XIRP1Q702N8 1843 aaKnown RBP24.75■■□□□ 1.55
LIMD2-212ENST00000584645 SLC4A1APQ9BWU0 796 aaKnown RBP24.74■■□□□ 1.55
LIMD2-212ENST00000584645 BCANQ96GW7 911 aa24.73■■□□□ 1.55
LIMD2-212ENST00000584645 CHD2O14647 1828 aaKnown RBP24.72■■□□□ 1.55
LIMD2-212ENST00000584645 ALKQ9UM73 1620 aa24.72■■□□□ 1.55
LIMD2-212ENST00000584645 TBX22Q9Y458 520 aa24.71■■□□□ 1.55
LIMD2-212ENST00000584645 ADAMTS13Q76LX8 1427 aa24.7■■□□□ 1.55
LIMD2-212ENST00000584645 PIK3R4Q99570 1358 aa24.69■■□□□ 1.54
LIMD2-212ENST00000584645 SETD5Q9C0A6 1442 aa24.68■■□□□ 1.54
LIMD2-212ENST00000584645 SETBP1Q9Y6X0 1596 aa24.67■■□□□ 1.54
LIMD2-212ENST00000584645 NEXMIFQ5QGS0 1516 aa24.67■■□□□ 1.54
LIMD2-212ENST00000584645 TMEM94Q12767 1356 aa24.66■■□□□ 1.54
LIMD2-212ENST00000584645 ZNF326Q5BKZ1 582 aaKnown RBP24.65■■□□□ 1.54
LIMD2-212ENST00000584645 NRXN3Q9Y4C0 1643 aa24.64■■□□□ 1.54
LIMD2-212ENST00000584645 NUTM2DQ5VT03 806 aaPredicted RBP24.64■■□□□ 1.54
LIMD2-212ENST00000584645 PIP4K2BP78356 416 aa24.63■■□□□ 1.53
LIMD2-212ENST00000584645 PROSER2Q86WR7 435 aaPredicted RBP24.63■■□□□ 1.53
LIMD2-212ENST00000584645 SCAF1Q9H7N4 1312 aaKnown RBP24.62■■□□□ 1.53
LIMD2-212ENST00000584645 MPHOSPH9Q99550 1183 aa24.61■■□□□ 1.53
LIMD2-212ENST00000584645 NCOA3Q9Y6Q9 1424 aa24.61■■□□□ 1.53
LIMD2-212ENST00000584645 RPGRIP1LQ68CZ1 1315 aa24.59■■□□□ 1.53
LIMD2-212ENST00000584645 SENP3Q9H4L4 574 aaPredicted RBP24.58■■□□□ 1.53
LIMD2-212ENST00000584645 CCDC144AA2RUR9 1427 aa24.58■■□□□ 1.53
LIMD2-212ENST00000584645 RAB3GAP2Q9H2M9 1393 aa24.56■■□□□ 1.52
LIMD2-212ENST00000584645 PPLO60437 1756 aa24.56■■□□□ 1.52
LIMD2-212ENST00000584645 MSH6P52701 1360 aa24.55■■□□□ 1.52
LIMD2-212ENST00000584645 XRN1Q8IZH2 1706 aaKnown RBP24.55■■□□□ 1.52
LIMD2-212ENST00000584645 HSPA1LP34931 641 aa24.55■■□□□ 1.52
LIMD2-212ENST00000584645 VGFO15240 615 aaPredicted RBP24.53■■□□□ 1.52
LIMD2-212ENST00000584645 FOXD1Q16676 465 aa24.53■■□□□ 1.52
LIMD2-212ENST00000584645 FAM135BQ49AJ0 1406 aa24.52■■□□□ 1.52
LIMD2-212ENST00000584645 PTPRUQ92729 1446 aa24.52■■□□□ 1.52
LIMD2-212ENST00000584645 SPATA31E1Q6ZUB1 1445 aa24.5■■□□□ 1.51
LIMD2-212ENST00000584645 HRCP23327 699 aa24.49■■□□□ 1.51
LIMD2-212ENST00000584645 AMOTL2Q9Y2J4 779 aa24.49■■□□□ 1.51
LIMD2-212ENST00000584645 SETD1AO15047 1707 aaKnown RBP24.49■■□□□ 1.51
LIMD2-212ENST00000584645 RBM33Q96EV2 1170 aaKnown RBP24.48■■□□□ 1.51
LIMD2-212ENST00000584645 IFT172Q9UG01 1749 aa24.48■■□□□ 1.51
LIMD2-212ENST00000584645 METP08581 1390 aa24.47■■□□□ 1.51
LIMD2-212ENST00000584645 ROBO1Q9Y6N7 1651 aa24.46■■□□□ 1.51
LIMD2-212ENST00000584645 SIPA1L2Q9P2F8 1722 aaPredicted RBP24.45■■□□□ 1.5
LIMD2-212ENST00000584645 ANKRD30BQ9BXX2 1392 aa24.44■■□□□ 1.5
LIMD2-212ENST00000584645 DISP3Q9P2K9 1392 aa24.44■■□□□ 1.5
LIMD2-212ENST00000584645 DCCP43146 1447 aa24.43■■□□□ 1.5
LIMD2-212ENST00000584645 PRAG1Q86YV5 1406 aa24.43■■□□□ 1.5
LIMD2-212ENST00000584645 C19orf44Q9H6X5 657 aa24.42■■□□□ 1.5
LIMD2-212ENST00000584645 C14orf37Q86TY3 774 aa24.41■■□□□ 1.5
LIMD2-212ENST00000584645 CADPS2Q86UW7 1296 aa24.4■■□□□ 1.5
LIMD2-212ENST00000584645 SLAIN2Q9P270 581 aa24.4■■□□□ 1.5
LIMD2-212ENST00000584645 PTCH1Q13635 1447 aa24.4■■□□□ 1.5
LIMD2-212ENST00000584645 MED1Q15648 1581 aaPredicted RBP24.38■■□□□ 1.49
LIMD2-212ENST00000584645 ATF3P18847 181 aa24.36■■□□□ 1.49
LIMD2-212ENST00000584645 RGL3Q3MIN7 710 aa24.36■■□□□ 1.49
LIMD2-212ENST00000584645 ADGRL3Q9HAR2 1447 aa24.35■■□□□ 1.49
LIMD2-212ENST00000584645 ADGRF5Q8IZF2 1346 aa24.35■■□□□ 1.49
LIMD2-212ENST00000584645 PIK3C2GO75747 1445 aa24.34■■□□□ 1.49
LIMD2-212ENST00000584645 MYOM2P54296 1465 aa24.33■■□□□ 1.49
LIMD2-212ENST00000584645 NALCNQ8IZF0 1738 aa24.32■■□□□ 1.48
LIMD2-212ENST00000584645 PHLPP1O60346 1717 aa24.32■■□□□ 1.48
LIMD2-212ENST00000584645 NRXN1Q9ULB1 1477 aa24.31■■□□□ 1.48
LIMD2-212ENST00000584645 LAMC1P11047 1609 aa24.3■■□□□ 1.48
LIMD2-212ENST00000584645 AHDC1Q5TGY3 1603 aaPredicted RBP24.29■■□□□ 1.48
LIMD2-212ENST00000584645 KNDC1Q76NI1 1749 aa24.29■■□□□ 1.48
LIMD2-212ENST00000584645 ROBO2Q9HCK4 1378 aa24.28■■□□□ 1.48
LIMD2-212ENST00000584645 TECPR2O15040 1411 aa24.27■■□□□ 1.48
LIMD2-212ENST00000584645 MST1RQ04912 1400 aa24.27■■□□□ 1.48
LIMD2-212ENST00000584645 COL16A1Q07092 1604 aaPredicted RBP24.26■■□□□ 1.47
LIMD2-212ENST00000584645 ASXL1Q8IXJ9 1541 aa24.25■■□□□ 1.47
LIMD2-212ENST00000584645 LRPPRCP42704 1394 aaKnown RBP24.25■■□□□ 1.47
LIMD2-212ENST00000584645 ABCC11Q96J66 1382 aa24.22■■□□□ 1.47
LIMD2-212ENST00000584645 BRINP3Q76B58 766 aa24.21■■□□□ 1.47
LIMD2-212ENST00000584645 STAC3Q96MF2 364 aa24.21■■□□□ 1.47
LIMD2-212ENST00000584645 JCADQ9P266 1359 aa24.2■■□□□ 1.46
LIMD2-212ENST00000584645 C14orf93Q9H972 538 aaKnown RBP24.2■■□□□ 1.46
LIMD2-212ENST00000584645 NHSL1Q5SYE7 1610 aa24.2■■□□□ 1.46
LIMD2-212ENST00000584645 CDC42BPGQ6DT37 1551 aa24.2■■□□□ 1.46
LIMD2-212ENST00000584645 YTHDC2Q9H6S0 1430 aaKnown RBP24.18■■□□□ 1.46
LIMD2-212ENST00000584645 ILDR2Q71H61 639 aa24.18■■□□□ 1.46
LIMD2-212ENST00000584645 C1orf167Q5SNV9 1468 aa24.17■■□□□ 1.46
LIMD2-212ENST00000584645 SHPRHQ149N8 1683 aa24.16■■□□□ 1.46
LIMD2-212ENST00000584645 PHF23Q9BUL5 403 aaPredicted RBP24.16■■□□□ 1.46
LIMD2-212ENST00000584645 SIRT1Q96EB6 747 aa24.15■■□□□ 1.46
LIMD2-212ENST00000584645 DHX57Q6P158 1386 aaKnown RBP24.15■■□□□ 1.46
LIMD2-212ENST00000584645 TMEM132EQ6IEE7 984 aa24.14■■□□□ 1.45
LIMD2-212ENST00000584645 STK26Q9P289 416 aa24.13■■□□□ 1.45
LIMD2-212ENST00000584645 CFAP70Q5T0N1 1121 aa24.12■■□□□ 1.45
LIMD2-212ENST00000584645 DLC1Q96QB1 1528 aa24.11■■□□□ 1.45
Retrieved 100 of 20,778 RNA–protein pairs in 75 ms