RNA–Protein interactions for RNA: ENST00000583927.1

SKA2-208, Transcript of spindle and kinetochore associated complex subunit 2, humanhuman

TSL 2

Gene SKA2, Length 533 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKA2-208ENST00000583927 ACIN1Q9UKV3 1341 aaKnown RBP14.92□□□□□ -0.02
SKA2-208ENST00000583927 HDGFP51858 240 aaKnown RBP14.91□□□□□ -0.02
SKA2-208ENST00000583927 RIMS2Q9UQ26 1411 aa14.9□□□□□ -0.02
SKA2-208ENST00000583927 CLTCL1P53675 1640 aa14.89□□□□□ -0.03
SKA2-208ENST00000583927 PLEKHG1Q9ULL1 1385 aa14.89□□□□□ -0.03
SKA2-208ENST00000583927 LRRC7Q96NW7 1537 aa14.89□□□□□ -0.03
SKA2-208ENST00000583927 DIP2AQ14689 1571 aa14.89□□□□□ -0.03
SKA2-208ENST00000583927 NWD1Q149M9 1564 aa14.89□□□□□ -0.03
SKA2-208ENST00000583927 ABCF1Q8NE71 845 aaKnown RBP eCLIP14.88□□□□□ -0.03
SKA2-208ENST00000583927 NKTRP30414 1462 aaKnown RBP14.85□□□□□ -0.03
SKA2-208ENST00000583927 ALKQ9UM73 1620 aa14.84□□□□□ -0.03
SKA2-208ENST00000583927 SETBP1Q9Y6X0 1596 aa14.83□□□□□ -0.04
SKA2-208ENST00000583927 UBAP1LF5GYI3 381 aa14.83□□□□□ -0.04
SKA2-208ENST00000583927 TOM1O60784 492 aa14.83□□□□□ -0.04
SKA2-208ENST00000583927 KCNA6P17658 529 aa14.83□□□□□ -0.04
SKA2-208ENST00000583927 TRIM52Q96A61 297 aa14.83□□□□□ -0.04
SKA2-208ENST00000583927 NRXN3Q9Y4C0 1643 aa14.82□□□□□ -0.04
SKA2-208ENST00000583927 SLC4A1APQ9BWU0 796 aaKnown RBP14.82□□□□□ -0.04
SKA2-208ENST00000583927 TBX22Q9Y458 520 aa14.82□□□□□ -0.04
SKA2-208ENST00000583927 PIK3R4Q99570 1358 aa14.82□□□□□ -0.04
SKA2-208ENST00000583927 SETD5Q9C0A6 1442 aa14.82□□□□□ -0.04
SKA2-208ENST00000583927 NEXMIFQ5QGS0 1516 aa14.82□□□□□ -0.04
SKA2-208ENST00000583927 PPP1R15AO75807 674 aaPredicted RBP14.81□□□□□ -0.04
SKA2-208ENST00000583927 CHGAP10645 457 aaKnown RBP14.81□□□□□ -0.04
SKA2-208ENST00000583927 ADAMTS13Q76LX8 1427 aa14.81□□□□□ -0.04
SKA2-208ENST00000583927 PPLO60437 1756 aa14.8□□□□□ -0.04
SKA2-208ENST00000583927 SLC26A8Q96RN1 970 aa14.8□□□□□ -0.04
SKA2-208ENST00000583927 NCOA3Q9Y6Q9 1424 aa14.78□□□□□ -0.04
SKA2-208ENST00000583927 IFT172Q9UG01 1749 aa14.77□□□□□ -0.05
SKA2-208ENST00000583927 RPGRIP1LQ68CZ1 1315 aa14.76□□□□□ -0.05
SKA2-208ENST00000583927 SETD1AO15047 1707 aaKnown RBP14.76□□□□□ -0.05
SKA2-208ENST00000583927 XRN1Q8IZH2 1706 aaKnown RBP14.76□□□□□ -0.05
SKA2-208ENST00000583927 HRCP23327 699 aa14.76□□□□□ -0.05
SKA2-208ENST00000583927 FOXD1Q16676 465 aa14.76□□□□□ -0.05
SKA2-208ENST00000583927 MPHOSPH9Q99550 1183 aa14.76□□□□□ -0.05
SKA2-208ENST00000583927 BCANQ96GW7 911 aa14.75□□□□□ -0.05
SKA2-208ENST00000583927 TMEM94Q12767 1356 aa14.74□□□□□ -0.05
SKA2-208ENST00000583927 ZNF326Q5BKZ1 582 aaKnown RBP14.74□□□□□ -0.05
SKA2-208ENST00000583927 RAB3GAP2Q9H2M9 1393 aa14.73□□□□□ -0.05
SKA2-208ENST00000583927 PROSER2Q86WR7 435 aaPredicted RBP14.73□□□□□ -0.05
SKA2-208ENST00000583927 CCDC144AA2RUR9 1427 aa14.73□□□□□ -0.05
SKA2-208ENST00000583927 SPATA31E1Q6ZUB1 1445 aa14.72□□□□□ -0.05
SKA2-208ENST00000583927 VGFO15240 615 aaPredicted RBP14.71□□□□□ -0.05
SKA2-208ENST00000583927 NUTM2DQ5VT03 806 aaPredicted RBP14.71□□□□□ -0.05
SKA2-208ENST00000583927 SIPA1L2Q9P2F8 1722 aaPredicted RBP14.71□□□□□ -0.05
SKA2-208ENST00000583927 FAM135BQ49AJ0 1406 aa14.7□□□□□ -0.06
SKA2-208ENST00000583927 PTPRUQ92729 1446 aa14.7□□□□□ -0.06
SKA2-208ENST00000583927 PRAG1Q86YV5 1406 aa14.69□□□□□ -0.06
SKA2-208ENST00000583927 PIP4K2BP78356 416 aa14.69□□□□□ -0.06
SKA2-208ENST00000583927 MSH6P52701 1360 aa14.69□□□□□ -0.06
SKA2-208ENST00000583927 ROBO1Q9Y6N7 1651 aa14.68□□□□□ -0.06
SKA2-208ENST00000583927 AMOTL2Q9Y2J4 779 aa14.67□□□□□ -0.06
SKA2-208ENST00000583927 ANKRD30BQ9BXX2 1392 aa14.67□□□□□ -0.06
SKA2-208ENST00000583927 SCAF1Q9H7N4 1312 aaKnown RBP14.66□□□□□ -0.06
SKA2-208ENST00000583927 METP08581 1390 aa14.66□□□□□ -0.06
SKA2-208ENST00000583927 HSPA1LP34931 641 aa14.66□□□□□ -0.06
SKA2-208ENST00000583927 DCCP43146 1447 aa14.66□□□□□ -0.06
SKA2-208ENST00000583927 C19orf44Q9H6X5 657 aa14.64□□□□□ -0.07
SKA2-208ENST00000583927 PTCH1Q13635 1447 aa14.64□□□□□ -0.07
SKA2-208ENST00000583927 NALCNQ8IZF0 1738 aa14.63□□□□□ -0.07
SKA2-208ENST00000583927 KNDC1Q76NI1 1749 aa14.62□□□□□ -0.07
SKA2-208ENST00000583927 CADPS2Q86UW7 1296 aa14.62□□□□□ -0.07
SKA2-208ENST00000583927 RBM33Q96EV2 1170 aaKnown RBP14.62□□□□□ -0.07
SKA2-208ENST00000583927 LAMC1P11047 1609 aa14.62□□□□□ -0.07
SKA2-208ENST00000583927 PIK3C2GO75747 1445 aa14.61□□□□□ -0.07
SKA2-208ENST00000583927 SLAIN2Q9P270 581 aa14.61□□□□□ -0.07
SKA2-208ENST00000583927 MYOM2P54296 1465 aa14.61□□□□□ -0.07
SKA2-208ENST00000583927 NRXN1Q9ULB1 1477 aa14.61□□□□□ -0.07
SKA2-208ENST00000583927 PHLPP1O60346 1717 aa14.6□□□□□ -0.07
SKA2-208ENST00000583927 ADGRL3Q9HAR2 1447 aa14.59□□□□□ -0.07
SKA2-208ENST00000583927 MED1Q15648 1581 aaPredicted RBP14.59□□□□□ -0.07
SKA2-208ENST00000583927 TECPR2O15040 1411 aa14.58□□□□□ -0.07
SKA2-208ENST00000583927 RGL3Q3MIN7 710 aa14.58□□□□□ -0.08
SKA2-208ENST00000583927 ADGRF5Q8IZF2 1346 aa14.58□□□□□ -0.08
SKA2-208ENST00000583927 AHDC1Q5TGY3 1603 aaPredicted RBP14.58□□□□□ -0.08
SKA2-208ENST00000583927 ATF3P18847 181 aa14.57□□□□□ -0.08
SKA2-208ENST00000583927 STAC3Q96MF2 364 aa14.57□□□□□ -0.08
SKA2-208ENST00000583927 DISP3Q9P2K9 1392 aa14.57□□□□□ -0.08
SKA2-208ENST00000583927 C14orf37Q86TY3 774 aa14.56□□□□□ -0.08
SKA2-208ENST00000583927 ASXL1Q8IXJ9 1541 aa14.56□□□□□ -0.08
SKA2-208ENST00000583927 COL16A1Q07092 1604 aaPredicted RBP14.55□□□□□ -0.08
SKA2-208ENST00000583927 NHSL1Q5SYE7 1610 aa14.55□□□□□ -0.08
SKA2-208ENST00000583927 ROBO2Q9HCK4 1378 aa14.55□□□□□ -0.08
SKA2-208ENST00000583927 ABCC11Q96J66 1382 aa14.54□□□□□ -0.08
SKA2-208ENST00000583927 MST1RQ04912 1400 aa14.54□□□□□ -0.08
SKA2-208ENST00000583927 LRPPRCP42704 1394 aaKnown RBP14.53□□□□□ -0.08
SKA2-208ENST00000583927 SHPRHQ149N8 1683 aa14.52□□□□□ -0.08
SKA2-208ENST00000583927 CDC42BPGQ6DT37 1551 aa14.52□□□□□ -0.08
SKA2-208ENST00000583927 C14orf93Q9H972 538 aaKnown RBP14.52□□□□□ -0.09
SKA2-208ENST00000583927 SIRT1Q96EB6 747 aa14.51□□□□□ -0.09
SKA2-208ENST00000583927 YTHDC2Q9H6S0 1430 aaKnown RBP14.5□□□□□ -0.09
SKA2-208ENST00000583927 KIAA1210Q9ULL0 1709 aa14.49□□□□□ -0.09
SKA2-208ENST00000583927 BRINP3Q76B58 766 aa14.49□□□□□ -0.09
SKA2-208ENST00000583927 DLC1Q96QB1 1528 aa14.49□□□□□ -0.09
SKA2-208ENST00000583927 JCADQ9P266 1359 aa14.48□□□□□ -0.09
SKA2-208ENST00000583927 ADGRB1O14514 1584 aa14.48□□□□□ -0.09
SKA2-208ENST00000583927 C1orf167Q5SNV9 1468 aa14.48□□□□□ -0.09
SKA2-208ENST00000583927 DHX57Q6P158 1386 aaKnown RBP14.47□□□□□ -0.09
SKA2-208ENST00000583927 FMN2Q9NZ56 1722 aa14.47□□□□□ -0.09
SKA2-208ENST00000583927 CFAP70Q5T0N1 1121 aa14.45□□□□□ -0.1
Retrieved 100 of 20,778 RNA–protein pairs in 38.6 ms