RNA–Protein interactions for RNA: ENST00000582009.5

RAB11FIP4-208, Transcript of RAB11 family interacting protein 4, humanhuman

TSL 3

Gene RAB11FIP4, Length 596 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB11FIP4-208ENST00000582009 MPHOSPH9Q99550 1183 aa30.28■■■□□ 2.44
RAB11FIP4-208ENST00000582009 RAB3GAP2Q9H2M9 1393 aa30.28■■■□□ 2.44
RAB11FIP4-208ENST00000582009 ZNF326Q5BKZ1 582 aaKnown RBP30.27■■■□□ 2.44
RAB11FIP4-208ENST00000582009 RIMS2Q9UQ26 1411 aa30.27■■■□□ 2.44
RAB11FIP4-208ENST00000582009 NUTM2DQ5VT03 806 aaPredicted RBP30.25■■■□□ 2.43
RAB11FIP4-208ENST00000582009 ABCF1Q8NE71 845 aaKnown RBP eCLIP30.24■■■□□ 2.43
RAB11FIP4-208ENST00000582009 TRPM2O94759 1503 aa30.22■■■□□ 2.43
RAB11FIP4-208ENST00000582009 SLC26A8Q96RN1 970 aa30.21■■■□□ 2.43
RAB11FIP4-208ENST00000582009 CLTCL1P53675 1640 aa30.2■■■□□ 2.43
RAB11FIP4-208ENST00000582009 ZFYVE9O95405 1425 aa30.19■■■□□ 2.42
RAB11FIP4-208ENST00000582009 KIF1BO60333 1816 aa30.17■■■□□ 2.42
RAB11FIP4-208ENST00000582009 CPS1P31327 1500 aa30.15■■■□□ 2.42
RAB11FIP4-208ENST00000582009 PLEKHG1Q9ULL1 1385 aa30.14■■■□□ 2.41
RAB11FIP4-208ENST00000582009 IQSEC2Q5JU85 1478 aa30.11■■■□□ 2.41
RAB11FIP4-208ENST00000582009 CCDC144AA2RUR9 1427 aa30.09■■■□□ 2.41
RAB11FIP4-208ENST00000582009 STRCP1A6NGW2 1772 aa30.08■■■□□ 2.41
RAB11FIP4-208ENST00000582009 HRCP23327 699 aa30.07■■■□□ 2.4
RAB11FIP4-208ENST00000582009 UBAP1LF5GYI3 381 aa30.06■■■□□ 2.4
RAB11FIP4-208ENST00000582009 KCNA6P17658 529 aa30.04■■■□□ 2.4
RAB11FIP4-208ENST00000582009 RGL3Q3MIN7 710 aa30.02■■■□□ 2.4
RAB11FIP4-208ENST00000582009 TBX22Q9Y458 520 aa30.02■■■□□ 2.4
RAB11FIP4-208ENST00000582009 LRRC7Q96NW7 1537 aa30■■■□□ 2.39
RAB11FIP4-208ENST00000582009 PROSER2Q86WR7 435 aaPredicted RBP29.99■■■□□ 2.39
RAB11FIP4-208ENST00000582009 RPGRIP1LQ68CZ1 1315 aa29.98■■■□□ 2.39
RAB11FIP4-208ENST00000582009 NEXMIFQ5QGS0 1516 aa29.98■■■□□ 2.39
RAB11FIP4-208ENST00000582009 VGFO15240 615 aaPredicted RBP29.98■■■□□ 2.39
RAB11FIP4-208ENST00000582009 SCAF1Q9H7N4 1312 aaKnown RBP29.96■■■□□ 2.39
RAB11FIP4-208ENST00000582009 TOM1O60784 492 aa29.96■■■□□ 2.39
RAB11FIP4-208ENST00000582009 ADAMTS13Q76LX8 1427 aa29.96■■■□□ 2.39
RAB11FIP4-208ENST00000582009 DIP2AQ14689 1571 aa29.94■■■□□ 2.38
RAB11FIP4-208ENST00000582009 PIP4K2BP78356 416 aa29.92■■■□□ 2.38
RAB11FIP4-208ENST00000582009 RBM33Q96EV2 1170 aaKnown RBP29.92■■■□□ 2.38
RAB11FIP4-208ENST00000582009 CHD2O14647 1828 aaKnown RBP29.92■■■□□ 2.38
RAB11FIP4-208ENST00000582009 TRIM26Q12899 539 aaPredicted RBP29.89■■■□□ 2.38
RAB11FIP4-208ENST00000582009 TMEM94Q12767 1356 aa29.89■■■□□ 2.37
RAB11FIP4-208ENST00000582009 PPLO60437 1756 aa29.88■■■□□ 2.37
RAB11FIP4-208ENST00000582009 SETBP1Q9Y6X0 1596 aa29.88■■■□□ 2.37
RAB11FIP4-208ENST00000582009 NWD1Q149M9 1564 aa29.87■■■□□ 2.37
RAB11FIP4-208ENST00000582009 AMOTL2Q9Y2J4 779 aa29.87■■■□□ 2.37
RAB11FIP4-208ENST00000582009 PIK3R4Q99570 1358 aa29.87■■■□□ 2.37
RAB11FIP4-208ENST00000582009 ANKRD30BQ9BXX2 1392 aa29.87■■■□□ 2.37
RAB11FIP4-208ENST00000582009 SPATA31E1Q6ZUB1 1445 aa29.87■■■□□ 2.37
RAB11FIP4-208ENST00000582009 NKTRP30414 1462 aaKnown RBP29.87■■■□□ 2.37
RAB11FIP4-208ENST00000582009 NRXN3Q9Y4C0 1643 aa29.86■■■□□ 2.37
RAB11FIP4-208ENST00000582009 XIRP1Q702N8 1843 aaKnown RBP29.85■■■□□ 2.37
RAB11FIP4-208ENST00000582009 C14orf37Q86TY3 774 aa29.84■■■□□ 2.37
RAB11FIP4-208ENST00000582009 METP08581 1390 aa29.81■■■□□ 2.36
RAB11FIP4-208ENST00000582009 ADGRF5Q8IZF2 1346 aa29.8■■■□□ 2.36
RAB11FIP4-208ENST00000582009 PTPRUQ92729 1446 aa29.79■■■□□ 2.36
RAB11FIP4-208ENST00000582009 MSH6P52701 1360 aa29.77■■■□□ 2.36
RAB11FIP4-208ENST00000582009 ALKQ9UM73 1620 aa29.76■■■□□ 2.35
RAB11FIP4-208ENST00000582009 IFT172Q9UG01 1749 aa29.75■■■□□ 2.35
RAB11FIP4-208ENST00000582009 KDM2AQ9Y2K7 1162 aa29.72■■■□□ 2.35
RAB11FIP4-208ENST00000582009 DCAF11Q8TEB1 546 aa29.69■■■□□ 2.34
RAB11FIP4-208ENST00000582009 XRN1Q8IZH2 1706 aaKnown RBP29.68■■■□□ 2.34
RAB11FIP4-208ENST00000582009 NCOA3Q9Y6Q9 1424 aa29.67■■■□□ 2.34
RAB11FIP4-208ENST00000582009 SETD1AO15047 1707 aaKnown RBP29.67■■■□□ 2.34
RAB11FIP4-208ENST00000582009 C19orf44Q9H6X5 657 aa29.66■■■□□ 2.34
RAB11FIP4-208ENST00000582009 ATF3P18847 181 aa29.65■■■□□ 2.34
RAB11FIP4-208ENST00000582009 HSPA1LP34931 641 aa29.65■■■□□ 2.34
RAB11FIP4-208ENST00000582009 STK26Q9P289 416 aa29.65■■■□□ 2.34
RAB11FIP4-208ENST00000582009 PIK3C2GO75747 1445 aa29.63■■■□□ 2.33
RAB11FIP4-208ENST00000582009 TMEM132EQ6IEE7 984 aa29.63■■■□□ 2.33
RAB11FIP4-208ENST00000582009 MYOM2P54296 1465 aa29.62■■■□□ 2.33
RAB11FIP4-208ENST00000582009 SLAIN2Q9P270 581 aa29.62■■■□□ 2.33
RAB11FIP4-208ENST00000582009 CADPS2Q86UW7 1296 aa29.61■■■□□ 2.33
RAB11FIP4-208ENST00000582009 CFAP70Q5T0N1 1121 aa29.6■■■□□ 2.33
RAB11FIP4-208ENST00000582009 SIPA1L2Q9P2F8 1722 aaPredicted RBP29.59■■■□□ 2.33
RAB11FIP4-208ENST00000582009 C14orf93Q9H972 538 aaKnown RBP29.59■■■□□ 2.33
RAB11FIP4-208ENST00000582009 ROBO2Q9HCK4 1378 aa29.56■■■□□ 2.32
RAB11FIP4-208ENST00000582009 NEUROD1Q13562 356 aa29.56■■■□□ 2.32
RAB11FIP4-208ENST00000582009 STAC3Q96MF2 364 aa29.56■■■□□ 2.32
RAB11FIP4-208ENST00000582009 NRXN1Q9ULB1 1477 aa29.55■■■□□ 2.32
RAB11FIP4-208ENST00000582009 PTCH1Q13635 1447 aa29.54■■■□□ 2.32
RAB11FIP4-208ENST00000582009 FAM135BQ49AJ0 1406 aa29.54■■■□□ 2.32
RAB11FIP4-208ENST00000582009 SIN3AQ96ST3 1273 aa29.54■■■□□ 2.32
RAB11FIP4-208ENST00000582009 DHX57Q6P158 1386 aaKnown RBP29.53■■■□□ 2.32
RAB11FIP4-208ENST00000582009 LRPPRCP42704 1394 aaKnown RBP29.52■■■□□ 2.32
RAB11FIP4-208ENST00000582009 ROBO1Q9Y6N7 1651 aa29.52■■■□□ 2.32
RAB11FIP4-208ENST00000582009 LAMC1P11047 1609 aa29.51■■■□□ 2.31
RAB11FIP4-208ENST00000582009 ADGRL3Q9HAR2 1447 aa29.51■■■□□ 2.31
RAB11FIP4-208ENST00000582009 YTHDC2Q9H6S0 1430 aaKnown RBP29.5■■■□□ 2.31
RAB11FIP4-208ENST00000582009 ASXL1Q8IXJ9 1541 aa29.5■■■□□ 2.31
RAB11FIP4-208ENST00000582009 WAPLQ7Z5K2 1190 aa29.49■■■□□ 2.31
RAB11FIP4-208ENST00000582009 ABCC11Q96J66 1382 aa29.48■■■□□ 2.31
RAB11FIP4-208ENST00000582009 NALCNQ8IZF0 1738 aa29.48■■■□□ 2.31
RAB11FIP4-208ENST00000582009 DCCP43146 1447 aa29.47■■■□□ 2.31
RAB11FIP4-208ENST00000582009 PCGF6Q9BYE7 350 aa29.46■■■□□ 2.31
RAB11FIP4-208ENST00000582009 PRAG1Q86YV5 1406 aa29.45■■■□□ 2.3
RAB11FIP4-208ENST00000582009 TECPR2O15040 1411 aa29.43■■■□□ 2.3
RAB11FIP4-208ENST00000582009 KNDC1Q76NI1 1749 aa29.42■■■□□ 2.3
RAB11FIP4-208ENST00000582009 L3MBTL2Q969R5 705 aa29.41■■■□□ 2.3
RAB11FIP4-208ENST00000582009 POGKQ9P215 609 aa29.41■■■□□ 2.3
RAB11FIP4-208ENST00000582009 SAFB2Q14151 953 aaKnown RBP eCLIP29.4■■■□□ 2.3
RAB11FIP4-208ENST00000582009 TRAK1Q9UPV9 953 aa29.4■■■□□ 2.3
RAB11FIP4-208ENST00000582009 PLEKHH1Q9ULM0 1364 aa29.39■■■□□ 2.3
RAB11FIP4-208ENST00000582009 MST1RQ04912 1400 aa29.38■■■□□ 2.29
RAB11FIP4-208ENST00000582009 BRINP3Q76B58 766 aa29.38■■■□□ 2.29
RAB11FIP4-208ENST00000582009 SIRT1Q96EB6 747 aa29.37■■■□□ 2.29
RAB11FIP4-208ENST00000582009 PRAM1Q96QH2 718 aa29.37■■■□□ 2.29
Retrieved 100 of 20,778 RNA–protein pairs in 52.3 ms