RNA–Protein interactions for RNA: ENST00000581956.1

KRT18P55-203, Transcript of keratin 18 pseudogene 55, humanhuman

TSL 3

Gene KRT18P55, Length 662 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KRT18P55-203ENST00000581956 NUTM2DQ5VT03 806 aaPredicted RBP34.14■■■■□ 3.06
KRT18P55-203ENST00000581956 CERKQ8TCT0 537 aa34.13■■■■□ 3.05
KRT18P55-203ENST00000581956 STRCP1A6NGW2 1772 aa34.13■■■■□ 3.05
KRT18P55-203ENST00000581956 ACIN1Q9UKV3 1341 aaKnown RBP34.06■■■■□ 3.04
KRT18P55-203ENST00000581956 PPP1R15AO75807 674 aaPredicted RBP34.05■■■■□ 3.04
KRT18P55-203ENST00000581956 ZNF326Q5BKZ1 582 aaKnown RBP34.04■■■■□ 3.04
KRT18P55-203ENST00000581956 SLC26A8Q96RN1 970 aa34.03■■■■□ 3.04
KRT18P55-203ENST00000581956 NEXMIFQ5QGS0 1516 aa34.01■■■■□ 3.04
KRT18P55-203ENST00000581956 HRCP23327 699 aa34.01■■■■□ 3.03
KRT18P55-203ENST00000581956 BCANQ96GW7 911 aa34.01■■■■□ 3.03
KRT18P55-203ENST00000581956 PLEKHG1Q9ULL1 1385 aa34■■■■□ 3.03
KRT18P55-203ENST00000581956 CCDC144AA2RUR9 1427 aa33.99■■■■□ 3.03
KRT18P55-203ENST00000581956 ABCF1Q8NE71 845 aaKnown RBP eCLIP33.98■■■■□ 3.03
KRT18P55-203ENST00000581956 HDGFP51858 240 aaKnown RBP33.97■■■■□ 3.03
KRT18P55-203ENST00000581956 ILDR1Q86SU0 546 aaPredicted RBP33.96■■■■□ 3.03
KRT18P55-203ENST00000581956 CPS1P31327 1500 aa33.94■■■■□ 3.02
KRT18P55-203ENST00000581956 PPLO60437 1756 aa33.94■■■■□ 3.02
KRT18P55-203ENST00000581956 NRXN3Q9Y4C0 1643 aa33.93■■■■□ 3.02
KRT18P55-203ENST00000581956 ADAMTS13Q76LX8 1427 aa33.91■■■■□ 3.02
KRT18P55-203ENST00000581956 TRIM26Q12899 539 aaPredicted RBP33.9■■■■□ 3.02
KRT18P55-203ENST00000581956 FBXO41Q8TF61 875 aa33.89■■■■□ 3.02
KRT18P55-203ENST00000581956 SPATA31E1Q6ZUB1 1445 aa33.88■■■■□ 3.01
KRT18P55-203ENST00000581956 CHD2O14647 1828 aaKnown RBP33.88■■■■□ 3.01
KRT18P55-203ENST00000581956 XIRP1Q702N8 1843 aaKnown RBP33.87■■■■□ 3.01
KRT18P55-203ENST00000581956 IFT172Q9UG01 1749 aa33.87■■■■□ 3.01
KRT18P55-203ENST00000581956 ANKRD30BQ9BXX2 1392 aa33.86■■■■□ 3.01
KRT18P55-203ENST00000581956 RGL3Q3MIN7 710 aa33.86■■■■□ 3.01
KRT18P55-203ENST00000581956 IQSEC2Q5JU85 1478 aa33.86■■■■□ 3.01
KRT18P55-203ENST00000581956 LRRC7Q96NW7 1537 aa33.85■■■■□ 3.01
KRT18P55-203ENST00000581956 SETBP1Q9Y6X0 1596 aa33.84■■■■□ 3.01
KRT18P55-203ENST00000581956 DIP2AQ14689 1571 aa33.83■■■■□ 3.01
KRT18P55-203ENST00000581956 NWD1Q149M9 1564 aa33.83■■■■□ 3.01
KRT18P55-203ENST00000581956 TBX22Q9Y458 520 aa33.81■■■■□ 3
KRT18P55-203ENST00000581956 KCNA6P17658 529 aa33.79■■■■□ 3
KRT18P55-203ENST00000581956 RPGRIP1LQ68CZ1 1315 aa33.78■■■■□ 3
KRT18P55-203ENST00000581956 SETD1AO15047 1707 aaKnown RBP33.76■■■□□ 2.99
KRT18P55-203ENST00000581956 RBM33Q96EV2 1170 aaKnown RBP33.74■■■□□ 2.99
KRT18P55-203ENST00000581956 PTPRUQ92729 1446 aa33.73■■■□□ 2.99
KRT18P55-203ENST00000581956 VGFO15240 615 aaPredicted RBP33.73■■■□□ 2.99
KRT18P55-203ENST00000581956 ADGRF5Q8IZF2 1346 aa33.72■■■□□ 2.99
KRT18P55-203ENST00000581956 UBAP1LF5GYI3 381 aa33.7■■■□□ 2.99
KRT18P55-203ENST00000581956 METP08581 1390 aa33.7■■■□□ 2.98
KRT18P55-203ENST00000581956 NKTRP30414 1462 aaKnown RBP33.69■■■□□ 2.98
KRT18P55-203ENST00000581956 ALKQ9UM73 1620 aa33.69■■■□□ 2.98
KRT18P55-203ENST00000581956 TMEM94Q12767 1356 aa33.68■■■□□ 2.98
KRT18P55-203ENST00000581956 PROSER2Q86WR7 435 aaPredicted RBP33.67■■■□□ 2.98
KRT18P55-203ENST00000581956 XRN1Q8IZH2 1706 aaKnown RBP33.67■■■□□ 2.98
KRT18P55-203ENST00000581956 PIK3R4Q99570 1358 aa33.66■■■□□ 2.98
KRT18P55-203ENST00000581956 AMOTL2Q9Y2J4 779 aa33.63■■■□□ 2.97
KRT18P55-203ENST00000581956 DHX57Q6P158 1386 aaKnown RBP33.6■■■□□ 2.97
KRT18P55-203ENST00000581956 PIK3C2GO75747 1445 aa33.57■■■□□ 2.96
KRT18P55-203ENST00000581956 MYOM2P54296 1465 aa33.56■■■□□ 2.96
KRT18P55-203ENST00000581956 PIP4K2BP78356 416 aa33.55■■■□□ 2.96
KRT18P55-203ENST00000581956 ASXL1Q8IXJ9 1541 aa33.54■■■□□ 2.96
KRT18P55-203ENST00000581956 TOM1O60784 492 aa33.54■■■□□ 2.96
KRT18P55-203ENST00000581956 NRXN1Q9ULB1 1477 aa33.54■■■□□ 2.96
KRT18P55-203ENST00000581956 SCAF1Q9H7N4 1312 aaKnown RBP33.53■■■□□ 2.96
KRT18P55-203ENST00000581956 KDM2AQ9Y2K7 1162 aa33.52■■■□□ 2.96
KRT18P55-203ENST00000581956 DCAF11Q8TEB1 546 aa33.5■■■□□ 2.95
KRT18P55-203ENST00000581956 SIN3AQ96ST3 1273 aa33.5■■■□□ 2.95
KRT18P55-203ENST00000581956 PCGF6Q9BYE7 350 aa33.48■■■□□ 2.95
KRT18P55-203ENST00000581956 SIPA1L2Q9P2F8 1722 aaPredicted RBP33.48■■■□□ 2.95
KRT18P55-203ENST00000581956 TMEM132EQ6IEE7 984 aa33.47■■■□□ 2.95
KRT18P55-203ENST00000581956 CFAP70Q5T0N1 1121 aa33.45■■■□□ 2.95
KRT18P55-203ENST00000581956 C14orf37Q86TY3 774 aa33.45■■■□□ 2.95
KRT18P55-203ENST00000581956 MSH6P52701 1360 aa33.45■■■□□ 2.94
KRT18P55-203ENST00000581956 LAMC1P11047 1609 aa33.44■■■□□ 2.94
KRT18P55-203ENST00000581956 NALCNQ8IZF0 1738 aa33.43■■■□□ 2.94
KRT18P55-203ENST00000581956 ROBO2Q9HCK4 1378 aa33.42■■■□□ 2.94
KRT18P55-203ENST00000581956 C14orf93Q9H972 538 aaKnown RBP33.41■■■□□ 2.94
KRT18P55-203ENST00000581956 STK26Q9P289 416 aa33.41■■■□□ 2.94
KRT18P55-203ENST00000581956 NCOA3Q9Y6Q9 1424 aa33.4■■■□□ 2.94
KRT18P55-203ENST00000581956 NEUROD1Q13562 356 aa33.4■■■□□ 2.94
KRT18P55-203ENST00000581956 KNDC1Q76NI1 1749 aa33.39■■■□□ 2.94
KRT18P55-203ENST00000581956 PTCH1Q13635 1447 aa33.39■■■□□ 2.94
KRT18P55-203ENST00000581956 PRAG1Q86YV5 1406 aa33.36■■■□□ 2.93
KRT18P55-203ENST00000581956 LRPPRCP42704 1394 aaKnown RBP33.35■■■□□ 2.93
KRT18P55-203ENST00000581956 YTHDC2Q9H6S0 1430 aaKnown RBP33.35■■■□□ 2.93
KRT18P55-203ENST00000581956 ROBO1Q9Y6N7 1651 aa33.34■■■□□ 2.93
KRT18P55-203ENST00000581956 C19orf44Q9H6X5 657 aa33.33■■■□□ 2.93
KRT18P55-203ENST00000581956 ADGRB1O14514 1584 aa33.31■■■□□ 2.92
KRT18P55-203ENST00000581956 ADGRL3Q9HAR2 1447 aa33.31■■■□□ 2.92
KRT18P55-203ENST00000581956 HSPA1LP34931 641 aa33.31■■■□□ 2.92
KRT18P55-203ENST00000581956 TECPR2O15040 1411 aa33.3■■■□□ 2.92
KRT18P55-203ENST00000581956 L3MBTL2Q969R5 705 aa33.3■■■□□ 2.92
KRT18P55-203ENST00000581956 WAPLQ7Z5K2 1190 aa33.28■■■□□ 2.92
KRT18P55-203ENST00000581956 ABCC11Q96J66 1382 aa33.28■■■□□ 2.92
KRT18P55-203ENST00000581956 PLEKHH1Q9ULM0 1364 aa33.28■■■□□ 2.92
KRT18P55-203ENST00000581956 ATF3P18847 181 aa33.27■■■□□ 2.92
KRT18P55-203ENST00000581956 STAC3Q96MF2 364 aa33.27■■■□□ 2.92
KRT18P55-203ENST00000581956 SLAIN2Q9P270 581 aa33.27■■■□□ 2.92
KRT18P55-203ENST00000581956 CADPS2Q86UW7 1296 aa33.25■■■□□ 2.91
KRT18P55-203ENST00000581956 FAM135BQ49AJ0 1406 aa33.24■■■□□ 2.91
KRT18P55-203ENST00000581956 KIAA1210Q9ULL0 1709 aa33.23■■■□□ 2.91
KRT18P55-203ENST00000581956 DCCP43146 1447 aa33.23■■■□□ 2.91
KRT18P55-203ENST00000581956 MST1RQ04912 1400 aa33.2■■■□□ 2.91
KRT18P55-203ENST00000581956 TRAK1Q9UPV9 953 aa33.18■■■□□ 2.9
KRT18P55-203ENST00000581956 DLC1Q96QB1 1528 aa33.17■■■□□ 2.9
KRT18P55-203ENST00000581956 ARHGEF28Q8N1W1 1705 aaKnown RBP33.16■■■□□ 2.9
KRT18P55-203ENST00000581956 SAFB2Q14151 953 aaKnown RBP eCLIP33.15■■■□□ 2.9
Retrieved 100 of 20,778 RNA–protein pairs in 11.9 ms