RNA–Protein interactions for RNA: ENST00000581849.1

CASC3-207, Transcript of CASC3, exon junction complex subunit, humanhuman

TSL 2

Gene CASC3, Length 580 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CASC3-207ENST00000581849 DISP3Q9P2K9 1392 aa33.89■■■■□ 3.02
CASC3-207ENST00000581849 SCAF1Q9H7N4 1312 aaKnown RBP33.89■■■■□ 3.02
CASC3-207ENST00000581849 KCNA6P17658 529 aa33.89■■■■□ 3.02
CASC3-207ENST00000581849 NWD1Q149M9 1564 aa33.88■■■■□ 3.01
CASC3-207ENST00000581849 XIRP1Q702N8 1843 aaKnown RBP33.88■■■■□ 3.01
CASC3-207ENST00000581849 ABCF1Q8NE71 845 aaKnown RBP eCLIP33.87■■■■□ 3.01
CASC3-207ENST00000581849 SLC26A8Q96RN1 970 aa33.86■■■■□ 3.01
CASC3-207ENST00000581849 SPHKAPQ2M3C7 1700 aa33.85■■■■□ 3.01
CASC3-207ENST00000581849 NKTRP30414 1462 aaKnown RBP33.85■■■■□ 3.01
CASC3-207ENST00000581849 HFM1A2PYH4 1435 aa33.83■■■■□ 3.01
CASC3-207ENST00000581849 PPP1R15AO75807 674 aaPredicted RBP33.83■■■■□ 3.01
CASC3-207ENST00000581849 HSPA1LP34931 641 aa33.83■■■■□ 3.01
CASC3-207ENST00000581849 CHGAP10645 457 aaKnown RBP33.81■■■■□ 3
CASC3-207ENST00000581849 BCANQ96GW7 911 aa33.79■■■■□ 3
CASC3-207ENST00000581849 TMEM94Q12767 1356 aa33.78■■■■□ 3
CASC3-207ENST00000581849 DIP2AQ14689 1571 aa33.77■■■■□ 3
CASC3-207ENST00000581849 TBX22Q9Y458 520 aa33.77■■■■□ 3
CASC3-207ENST00000581849 CHD2O14647 1828 aaKnown RBP33.76■■■□□ 2.99
CASC3-207ENST00000581849 TRPM2O94759 1503 aa33.73■■■□□ 2.99
CASC3-207ENST00000581849 PROSER2Q86WR7 435 aaPredicted RBP33.72■■■□□ 2.99
CASC3-207ENST00000581849 PIK3R4Q99570 1358 aa33.72■■■□□ 2.99
CASC3-207ENST00000581849 ADAMTS13Q76LX8 1427 aa33.71■■■□□ 2.99
CASC3-207ENST00000581849 FAM135BQ49AJ0 1406 aa33.66■■■□□ 2.98
CASC3-207ENST00000581849 CLTCL1P53675 1640 aa33.65■■■□□ 2.98
CASC3-207ENST00000581849 NCOA3Q9Y6Q9 1424 aa33.65■■■□□ 2.98
CASC3-207ENST00000581849 NUTM2DQ5VT03 806 aaPredicted RBP33.62■■■□□ 2.97
CASC3-207ENST00000581849 SETBP1Q9Y6X0 1596 aa33.62■■■□□ 2.97
CASC3-207ENST00000581849 MSH6P52701 1360 aa33.61■■■□□ 2.97
CASC3-207ENST00000581849 MED1Q15648 1581 aaPredicted RBP33.61■■■□□ 2.97
CASC3-207ENST00000581849 TRIM52Q96A61 297 aa33.61■■■□□ 2.97
CASC3-207ENST00000581849 KIF1BO60333 1816 aa33.6■■■□□ 2.97
CASC3-207ENST00000581849 ILDR2Q71H61 639 aa33.59■■■□□ 2.97
CASC3-207ENST00000581849 SENP3Q9H4L4 574 aaPredicted RBP33.59■■■□□ 2.97
CASC3-207ENST00000581849 NRXN3Q9Y4C0 1643 aa33.57■■■□□ 2.96
CASC3-207ENST00000581849 ZNF326Q5BKZ1 582 aaKnown RBP33.56■■■□□ 2.96
CASC3-207ENST00000581849 NEXMIFQ5QGS0 1516 aa33.55■■■□□ 2.96
CASC3-207ENST00000581849 RBM33Q96EV2 1170 aaKnown RBP33.55■■■□□ 2.96
CASC3-207ENST00000581849 SLC4A1APQ9BWU0 796 aaKnown RBP33.55■■■□□ 2.96
CASC3-207ENST00000581849 ROBO1Q9Y6N7 1651 aa33.52■■■□□ 2.96
CASC3-207ENST00000581849 ACIN1Q9UKV3 1341 aaKnown RBP33.49■■■□□ 2.95
CASC3-207ENST00000581849 XRN1Q8IZH2 1706 aaKnown RBP33.48■■■□□ 2.95
CASC3-207ENST00000581849 PTPRUQ92729 1446 aa33.48■■■□□ 2.95
CASC3-207ENST00000581849 AMOTL2Q9Y2J4 779 aa33.47■■■□□ 2.95
CASC3-207ENST00000581849 SLAIN2Q9P270 581 aa33.45■■■□□ 2.95
CASC3-207ENST00000581849 RPGRIP1LQ68CZ1 1315 aa33.44■■■□□ 2.94
CASC3-207ENST00000581849 SOCS7O14512 581 aa33.43■■■□□ 2.94
CASC3-207ENST00000581849 C19orf44Q9H6X5 657 aa33.43■■■□□ 2.94
CASC3-207ENST00000581849 SIPA1L2Q9P2F8 1722 aaPredicted RBP33.41■■■□□ 2.94
CASC3-207ENST00000581849 VGFO15240 615 aaPredicted RBP33.4■■■□□ 2.94
CASC3-207ENST00000581849 C14orf37Q86TY3 774 aa33.4■■■□□ 2.94
CASC3-207ENST00000581849 CADPS2Q86UW7 1296 aa33.4■■■□□ 2.94
CASC3-207ENST00000581849 METP08581 1390 aa33.39■■■□□ 2.94
CASC3-207ENST00000581849 DCCP43146 1447 aa33.38■■■□□ 2.93
CASC3-207ENST00000581849 PPLO60437 1756 aa33.35■■■□□ 2.93
CASC3-207ENST00000581849 ATF3P18847 181 aa33.35■■■□□ 2.93
CASC3-207ENST00000581849 MPHOSPH9Q99550 1183 aa33.34■■■□□ 2.93
CASC3-207ENST00000581849 CCDC144AA2RUR9 1427 aa33.34■■■□□ 2.93
CASC3-207ENST00000581849 PHF23Q9BUL5 403 aaPredicted RBP33.33■■■□□ 2.93
CASC3-207ENST00000581849 SETD1AO15047 1707 aaKnown RBP33.32■■■□□ 2.92
CASC3-207ENST00000581849 SETD5Q9C0A6 1442 aa33.32■■■□□ 2.92
CASC3-207ENST00000581849 PHLPP1O60346 1717 aa33.31■■■□□ 2.92
CASC3-207ENST00000581849 PRAG1Q86YV5 1406 aa33.29■■■□□ 2.92
CASC3-207ENST00000581849 FOXD1Q16676 465 aa33.29■■■□□ 2.92
CASC3-207ENST00000581849 AHDC1Q5TGY3 1603 aaPredicted RBP33.26■■■□□ 2.91
CASC3-207ENST00000581849 PTCH1Q13635 1447 aa33.26■■■□□ 2.91
CASC3-207ENST00000581849 SPATA31E1Q6ZUB1 1445 aa33.26■■■□□ 2.91
CASC3-207ENST00000581849 COL16A1Q07092 1604 aaPredicted RBP33.25■■■□□ 2.91
CASC3-207ENST00000581849 ADGRL3Q9HAR2 1447 aa33.25■■■□□ 2.91
CASC3-207ENST00000581849 JCADQ9P266 1359 aa33.23■■■□□ 2.91
CASC3-207ENST00000581849 ANKRD30BQ9BXX2 1392 aa33.21■■■□□ 2.91
CASC3-207ENST00000581849 MST1RQ04912 1400 aa33.19■■■□□ 2.9
CASC3-207ENST00000581849 IFT172Q9UG01 1749 aa33.19■■■□□ 2.9
CASC3-207ENST00000581849 NALCNQ8IZF0 1738 aa33.19■■■□□ 2.9
CASC3-207ENST00000581849 RAB3GAP2Q9H2M9 1393 aa33.17■■■□□ 2.9
CASC3-207ENST00000581849 BRINP3Q76B58 766 aa33.16■■■□□ 2.9
CASC3-207ENST00000581849 ASXL1Q8IXJ9 1541 aa33.14■■■□□ 2.9
CASC3-207ENST00000581849 ROBO2Q9HCK4 1378 aa33.13■■■□□ 2.89
CASC3-207ENST00000581849 ADGRF5Q8IZF2 1346 aa33.11■■■□□ 2.89
CASC3-207ENST00000581849 RGL3Q3MIN7 710 aa33.11■■■□□ 2.89
CASC3-207ENST00000581849 RGS17Q9UGC6 210 aaPredicted RBP33.1■■■□□ 2.89
CASC3-207ENST00000581849 SHPRHQ149N8 1683 aa33.1■■■□□ 2.89
CASC3-207ENST00000581849 SPATA31A6Q5VVP1 1343 aa33.09■■■□□ 2.89
CASC3-207ENST00000581849 NHSL1Q5SYE7 1610 aa33.09■■■□□ 2.89
CASC3-207ENST00000581849 PIK3C2GO75747 1445 aa33.07■■■□□ 2.88
CASC3-207ENST00000581849 TECPR2O15040 1411 aa33.05■■■□□ 2.88
CASC3-207ENST00000581849 HRCP23327 699 aa33.05■■■□□ 2.88
CASC3-207ENST00000581849 C1orf167Q5SNV9 1468 aa33.02■■■□□ 2.88
CASC3-207ENST00000581849 MYOM2P54296 1465 aa33.01■■■□□ 2.88
CASC3-207ENST00000581849 LRPPRCP42704 1394 aaKnown RBP33.01■■■□□ 2.88
CASC3-207ENST00000581849 KNDC1Q76NI1 1749 aa33■■■□□ 2.87
CASC3-207ENST00000581849 NRXN1Q9ULB1 1477 aa32.99■■■□□ 2.87
CASC3-207ENST00000581849 LAMC1P11047 1609 aa32.99■■■□□ 2.87
CASC3-207ENST00000581849 ABCC11Q96J66 1382 aa32.98■■■□□ 2.87
CASC3-207ENST00000581849 CDC42BPGQ6DT37 1551 aa32.98■■■□□ 2.87
CASC3-207ENST00000581849 LRP6O75581 1613 aa32.96■■■□□ 2.87
CASC3-207ENST00000581849 LRRC59Q96AG4 307 aaKnown RBP32.94■■■□□ 2.86
CASC3-207ENST00000581849 C14orf93Q9H972 538 aaKnown RBP32.92■■■□□ 2.86
CASC3-207ENST00000581849 POTEAQ6S8J7 498 aa32.91■■■□□ 2.86
CASC3-207ENST00000581849 YTHDC2Q9H6S0 1430 aaKnown RBP32.91■■■□□ 2.86
CASC3-207ENST00000581849 SIRT1Q96EB6 747 aa32.89■■■□□ 2.86
Retrieved 100 of 20,778 RNA–protein pairs in 31.2 ms