RNA–Protein interactions for RNA: ENST00000581598.1

CCDC42-203, Transcript of coiled-coil domain containing 42, humanhuman

TSL 4

Gene CCDC42, Length 538 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC42-203ENST00000581598 SCAF1Q9H7N4 1312 aaKnown RBP31.87■■■□□ 2.69
CCDC42-203ENST00000581598 HSPA1LP34931 641 aa31.84■■■□□ 2.69
CCDC42-203ENST00000581598 HDGFP51858 240 aaKnown RBP31.84■■■□□ 2.69
CCDC42-203ENST00000581598 KCNA6P17658 529 aa31.83■■■□□ 2.69
CCDC42-203ENST00000581598 RIMS2Q9UQ26 1411 aa31.83■■■□□ 2.69
CCDC42-203ENST00000581598 PLEKHG1Q9ULL1 1385 aa31.82■■■□□ 2.69
CCDC42-203ENST00000581598 NWD1Q149M9 1564 aa31.81■■■□□ 2.68
CCDC42-203ENST00000581598 SLC26A8Q96RN1 970 aa31.8■■■□□ 2.68
CCDC42-203ENST00000581598 NKTRP30414 1462 aaKnown RBP31.78■■■□□ 2.68
CCDC42-203ENST00000581598 ABCF1Q8NE71 845 aaKnown RBP eCLIP31.77■■■□□ 2.68
CCDC42-203ENST00000581598 NAIPQ13075 1403 aa31.75■■■□□ 2.67
CCDC42-203ENST00000581598 SPHKAPQ2M3C7 1700 aa31.75■■■□□ 2.67
CCDC42-203ENST00000581598 CHD2O14647 1828 aaKnown RBP31.73■■■□□ 2.67
CCDC42-203ENST00000581598 TMEM94Q12767 1356 aa31.73■■■□□ 2.67
CCDC42-203ENST00000581598 PPP1R15AO75807 674 aaPredicted RBP31.73■■■□□ 2.67
CCDC42-203ENST00000581598 CHGAP10645 457 aaKnown RBP31.72■■■□□ 2.67
CCDC42-203ENST00000581598 BCANQ96GW7 911 aa31.71■■■□□ 2.67
CCDC42-203ENST00000581598 TBX22Q9Y458 520 aa31.69■■■□□ 2.66
CCDC42-203ENST00000581598 DIP2AQ14689 1571 aa31.68■■■□□ 2.66
CCDC42-203ENST00000581598 PROSER2Q86WR7 435 aaPredicted RBP31.68■■■□□ 2.66
CCDC42-203ENST00000581598 HFM1A2PYH4 1435 aa31.66■■■□□ 2.66
CCDC42-203ENST00000581598 MED1Q15648 1581 aaPredicted RBP31.66■■■□□ 2.66
CCDC42-203ENST00000581598 ADAMTS13Q76LX8 1427 aa31.66■■■□□ 2.66
CCDC42-203ENST00000581598 FAM135BQ49AJ0 1406 aa31.64■■■□□ 2.66
CCDC42-203ENST00000581598 PIK3R4Q99570 1358 aa31.63■■■□□ 2.65
CCDC42-203ENST00000581598 TRPM2O94759 1503 aa31.61■■■□□ 2.65
CCDC42-203ENST00000581598 NCOA3Q9Y6Q9 1424 aa31.58■■■□□ 2.65
CCDC42-203ENST00000581598 CLTCL1P53675 1640 aa31.57■■■□□ 2.64
CCDC42-203ENST00000581598 NUTM2DQ5VT03 806 aaPredicted RBP31.57■■■□□ 2.64
CCDC42-203ENST00000581598 SENP3Q9H4L4 574 aaPredicted RBP31.57■■■□□ 2.64
CCDC42-203ENST00000581598 MSH6P52701 1360 aa31.56■■■□□ 2.64
CCDC42-203ENST00000581598 RBM33Q96EV2 1170 aaKnown RBP31.55■■■□□ 2.64
CCDC42-203ENST00000581598 SETBP1Q9Y6X0 1596 aa31.54■■■□□ 2.64
CCDC42-203ENST00000581598 NRXN3Q9Y4C0 1643 aa31.53■■■□□ 2.64
CCDC42-203ENST00000581598 KIF1BO60333 1816 aa31.52■■■□□ 2.64
CCDC42-203ENST00000581598 ROBO1Q9Y6N7 1651 aa31.52■■■□□ 2.64
CCDC42-203ENST00000581598 TRIM52Q96A61 297 aa31.48■■■□□ 2.63
CCDC42-203ENST00000581598 NEXMIFQ5QGS0 1516 aa31.48■■■□□ 2.63
CCDC42-203ENST00000581598 ZNF326Q5BKZ1 582 aaKnown RBP31.47■■■□□ 2.63
CCDC42-203ENST00000581598 PTPRUQ92729 1446 aa31.45■■■□□ 2.63
CCDC42-203ENST00000581598 SLAIN2Q9P270 581 aa31.44■■■□□ 2.62
CCDC42-203ENST00000581598 XRN1Q8IZH2 1706 aaKnown RBP31.44■■■□□ 2.62
CCDC42-203ENST00000581598 SLC4A1APQ9BWU0 796 aaKnown RBP31.43■■■□□ 2.62
CCDC42-203ENST00000581598 AMOTL2Q9Y2J4 779 aa31.42■■■□□ 2.62
CCDC42-203ENST00000581598 SIPA1L2Q9P2F8 1722 aaPredicted RBP31.41■■■□□ 2.62
CCDC42-203ENST00000581598 C19orf44Q9H6X5 657 aa31.38■■■□□ 2.61
CCDC42-203ENST00000581598 CADPS2Q86UW7 1296 aa31.36■■■□□ 2.61
CCDC42-203ENST00000581598 PHF23Q9BUL5 403 aaPredicted RBP31.36■■■□□ 2.61
CCDC42-203ENST00000581598 C14orf37Q86TY3 774 aa31.35■■■□□ 2.61
CCDC42-203ENST00000581598 METP08581 1390 aa31.34■■■□□ 2.61
CCDC42-203ENST00000581598 PHLPP1O60346 1717 aa31.33■■■□□ 2.61
CCDC42-203ENST00000581598 RPGRIP1LQ68CZ1 1315 aa31.33■■■□□ 2.61
CCDC42-203ENST00000581598 DCCP43146 1447 aa31.32■■■□□ 2.61
CCDC42-203ENST00000581598 VGFO15240 615 aaPredicted RBP31.31■■■□□ 2.6
CCDC42-203ENST00000581598 ATF3P18847 181 aa31.3■■■□□ 2.6
CCDC42-203ENST00000581598 PPLO60437 1756 aa31.3■■■□□ 2.6
CCDC42-203ENST00000581598 ACIN1Q9UKV3 1341 aaKnown RBP31.29■■■□□ 2.6
CCDC42-203ENST00000581598 RGS17Q9UGC6 210 aaPredicted RBP31.29■■■□□ 2.6
CCDC42-203ENST00000581598 SETD1AO15047 1707 aaKnown RBP31.29■■■□□ 2.6
CCDC42-203ENST00000581598 COL16A1Q07092 1604 aaPredicted RBP31.26■■■□□ 2.59
CCDC42-203ENST00000581598 AHDC1Q5TGY3 1603 aaPredicted RBP31.25■■■□□ 2.59
CCDC42-203ENST00000581598 MPHOSPH9Q99550 1183 aa31.24■■■□□ 2.59
CCDC42-203ENST00000581598 JCADQ9P266 1359 aa31.22■■■□□ 2.59
CCDC42-203ENST00000581598 CCDC144AA2RUR9 1427 aa31.22■■■□□ 2.59
CCDC42-203ENST00000581598 PRAG1Q86YV5 1406 aa31.22■■■□□ 2.59
CCDC42-203ENST00000581598 FOXD1Q16676 465 aa31.21■■■□□ 2.59
CCDC42-203ENST00000581598 PTCH1Q13635 1447 aa31.2■■■□□ 2.59
CCDC42-203ENST00000581598 ADGRL3Q9HAR2 1447 aa31.2■■■□□ 2.59
CCDC42-203ENST00000581598 MST1RQ04912 1400 aa31.17■■■□□ 2.58
CCDC42-203ENST00000581598 SPATA31E1Q6ZUB1 1445 aa31.17■■■□□ 2.58
CCDC42-203ENST00000581598 SETD5Q9C0A6 1442 aa31.17■■■□□ 2.58
CCDC42-203ENST00000581598 NALCNQ8IZF0 1738 aa31.17■■■□□ 2.58
CCDC42-203ENST00000581598 BRINP3Q76B58 766 aa31.15■■■□□ 2.58
CCDC42-203ENST00000581598 IFT172Q9UG01 1749 aa31.15■■■□□ 2.58
CCDC42-203ENST00000581598 ASXL1Q8IXJ9 1541 aa31.12■■■□□ 2.57
CCDC42-203ENST00000581598 SHPRHQ149N8 1683 aa31.12■■■□□ 2.57
CCDC42-203ENST00000581598 ANKRD30BQ9BXX2 1392 aa31.1■■■□□ 2.57
CCDC42-203ENST00000581598 NHSL1Q5SYE7 1610 aa31.09■■■□□ 2.57
CCDC42-203ENST00000581598 ROBO2Q9HCK4 1378 aa31.09■■■□□ 2.57
CCDC42-203ENST00000581598 SPATA31A6Q5VVP1 1343 aa31.09■■■□□ 2.57
CCDC42-203ENST00000581598 ADGRF5Q8IZF2 1346 aa31.06■■■□□ 2.56
CCDC42-203ENST00000581598 POTEAQ6S8J7 498 aa31.06■■■□□ 2.56
CCDC42-203ENST00000581598 RGL3Q3MIN7 710 aa31.04■■■□□ 2.56
CCDC42-203ENST00000581598 RAB3GAP2Q9H2M9 1393 aa31.04■■■□□ 2.56
CCDC42-203ENST00000581598 LRP6O75581 1613 aa31.01■■■□□ 2.55
CCDC42-203ENST00000581598 C1orf167Q5SNV9 1468 aa31.01■■■□□ 2.55
CCDC42-203ENST00000581598 PIK3C2GO75747 1445 aa30.99■■■□□ 2.55
CCDC42-203ENST00000581598 LAMC1P11047 1609 aa30.99■■■□□ 2.55
CCDC42-203ENST00000581598 TECPR2O15040 1411 aa30.98■■■□□ 2.55
CCDC42-203ENST00000581598 KNDC1Q76NI1 1749 aa30.96■■■□□ 2.55
CCDC42-203ENST00000581598 LRPPRCP42704 1394 aaKnown RBP30.95■■■□□ 2.55
CCDC42-203ENST00000581598 CDC42BPGQ6DT37 1551 aa30.94■■■□□ 2.54
CCDC42-203ENST00000581598 LRRC59Q96AG4 307 aaKnown RBP30.94■■■□□ 2.54
CCDC42-203ENST00000581598 ABCC11Q96J66 1382 aa30.93■■■□□ 2.54
CCDC42-203ENST00000581598 MYOM2P54296 1465 aa30.93■■■□□ 2.54
CCDC42-203ENST00000581598 NRXN1Q9ULB1 1477 aa30.93■■■□□ 2.54
CCDC42-203ENST00000581598 HRCP23327 699 aa30.91■■■□□ 2.54
CCDC42-203ENST00000581598 MEX3CQ5U5Q3 659 aaKnown RBP30.88■■■□□ 2.53
CCDC42-203ENST00000581598 DDX17Q92841 729 aaKnown RBP30.86■■■□□ 2.53
CCDC42-203ENST00000581598 C14orf93Q9H972 538 aaKnown RBP30.86■■■□□ 2.53
Retrieved 100 of 20,778 RNA–protein pairs in 20.7 ms