RNA–Protein interactions for RNA: ENST00000579211.1

ITGB4-205, Transcript of integrin subunit beta 4, humanhuman

TSL 2

Gene ITGB4, Length 411 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITGB4-205ENST00000579211 ZNF326Q5BKZ1 582 aaKnown RBP25.97■■□□□ 1.75
ITGB4-205ENST00000579211 TRPM2O94759 1503 aa25.97■■□□□ 1.75
ITGB4-205ENST00000579211 ABCF1Q8NE71 845 aaKnown RBP eCLIP25.96■■□□□ 1.75
ITGB4-205ENST00000579211 SENP3Q9H4L4 574 aaPredicted RBP25.96■■□□□ 1.75
ITGB4-205ENST00000579211 CLTCL1P53675 1640 aa25.96■■□□□ 1.75
ITGB4-205ENST00000579211 CPS1P31327 1500 aa25.95■■□□□ 1.74
ITGB4-205ENST00000579211 MPHOSPH9Q99550 1183 aa25.94■■□□□ 1.74
ITGB4-205ENST00000579211 IQSEC2Q5JU85 1478 aa25.93■■□□□ 1.74
ITGB4-205ENST00000579211 NUTM2DQ5VT03 806 aaPredicted RBP25.93■■□□□ 1.74
ITGB4-205ENST00000579211 RAB3GAP2Q9H2M9 1393 aa25.93■■□□□ 1.74
ITGB4-205ENST00000579211 STRCP1A6NGW2 1772 aa25.92■■□□□ 1.74
ITGB4-205ENST00000579211 FOXD1Q16676 465 aa25.91■■□□□ 1.74
ITGB4-205ENST00000579211 ZFYVE9O95405 1425 aa25.9■■□□□ 1.74
ITGB4-205ENST00000579211 SLC26A8Q96RN1 970 aa25.9■■□□□ 1.74
ITGB4-205ENST00000579211 PLEKHG1Q9ULL1 1385 aa25.86■■□□□ 1.73
ITGB4-205ENST00000579211 UBAP1LF5GYI3 381 aa25.83■■□□□ 1.73
ITGB4-205ENST00000579211 CHD2O14647 1828 aaKnown RBP25.82■■□□□ 1.72
ITGB4-205ENST00000579211 CCDC144AA2RUR9 1427 aa25.81■■□□□ 1.72
ITGB4-205ENST00000579211 KCNA6P17658 529 aa25.78■■□□□ 1.72
ITGB4-205ENST00000579211 HRCP23327 699 aa25.77■■□□□ 1.72
ITGB4-205ENST00000579211 LRRC7Q96NW7 1537 aa25.77■■□□□ 1.72
ITGB4-205ENST00000579211 PPLO60437 1756 aa25.77■■□□□ 1.72
ITGB4-205ENST00000579211 XIRP1Q702N8 1843 aaKnown RBP25.77■■□□□ 1.72
ITGB4-205ENST00000579211 TOM1O60784 492 aa25.76■■□□□ 1.71
ITGB4-205ENST00000579211 TBX22Q9Y458 520 aa25.76■■□□□ 1.71
ITGB4-205ENST00000579211 NEXMIFQ5QGS0 1516 aa25.76■■□□□ 1.71
ITGB4-205ENST00000579211 DIP2AQ14689 1571 aa25.76■■□□□ 1.71
ITGB4-205ENST00000579211 SCAF1Q9H7N4 1312 aaKnown RBP25.75■■□□□ 1.71
ITGB4-205ENST00000579211 PROSER2Q86WR7 435 aaPredicted RBP25.74■■□□□ 1.71
ITGB4-205ENST00000579211 RPGRIP1LQ68CZ1 1315 aa25.73■■□□□ 1.71
ITGB4-205ENST00000579211 VGFO15240 615 aaPredicted RBP25.73■■□□□ 1.71
ITGB4-205ENST00000579211 RGL3Q3MIN7 710 aa25.72■■□□□ 1.71
ITGB4-205ENST00000579211 NWD1Q149M9 1564 aa25.7■■□□□ 1.71
ITGB4-205ENST00000579211 ADAMTS13Q76LX8 1427 aa25.7■■□□□ 1.7
ITGB4-205ENST00000579211 PIP4K2BP78356 416 aa25.69■■□□□ 1.7
ITGB4-205ENST00000579211 SETBP1Q9Y6X0 1596 aa25.69■■□□□ 1.7
ITGB4-205ENST00000579211 NRXN3Q9Y4C0 1643 aa25.68■■□□□ 1.7
ITGB4-205ENST00000579211 NKTRP30414 1462 aaKnown RBP25.67■■□□□ 1.7
ITGB4-205ENST00000579211 PIK3R4Q99570 1358 aa25.66■■□□□ 1.7
ITGB4-205ENST00000579211 IFT172Q9UG01 1749 aa25.66■■□□□ 1.7
ITGB4-205ENST00000579211 TMEM94Q12767 1356 aa25.65■■□□□ 1.7
ITGB4-205ENST00000579211 RBM33Q96EV2 1170 aaKnown RBP25.64■■□□□ 1.7
ITGB4-205ENST00000579211 C14orf37Q86TY3 774 aa25.63■■□□□ 1.69
ITGB4-205ENST00000579211 AMOTL2Q9Y2J4 779 aa25.62■■□□□ 1.69
ITGB4-205ENST00000579211 SPATA31E1Q6ZUB1 1445 aa25.61■■□□□ 1.69
ITGB4-205ENST00000579211 MSH6P52701 1360 aa25.57■■□□□ 1.68
ITGB4-205ENST00000579211 ANKRD30BQ9BXX2 1392 aa25.57■■□□□ 1.68
ITGB4-205ENST00000579211 TRIM26Q12899 539 aaPredicted RBP25.57■■□□□ 1.68
ITGB4-205ENST00000579211 ALKQ9UM73 1620 aa25.56■■□□□ 1.68
ITGB4-205ENST00000579211 METP08581 1390 aa25.56■■□□□ 1.68
ITGB4-205ENST00000579211 SETD1AO15047 1707 aaKnown RBP25.55■■□□□ 1.68
ITGB4-205ENST00000579211 PTPRUQ92729 1446 aa25.54■■□□□ 1.68
ITGB4-205ENST00000579211 XRN1Q8IZH2 1706 aaKnown RBP25.54■■□□□ 1.68
ITGB4-205ENST00000579211 ADGRF5Q8IZF2 1346 aa25.53■■□□□ 1.68
ITGB4-205ENST00000579211 SIPA1L2Q9P2F8 1722 aaPredicted RBP25.51■■□□□ 1.67
ITGB4-205ENST00000579211 NCOA3Q9Y6Q9 1424 aa25.5■■□□□ 1.67
ITGB4-205ENST00000579211 ATF3P18847 181 aa25.47■■□□□ 1.67
ITGB4-205ENST00000579211 HSPA1LP34931 641 aa25.46■■□□□ 1.67
ITGB4-205ENST00000579211 C19orf44Q9H6X5 657 aa25.46■■□□□ 1.67
ITGB4-205ENST00000579211 KDM2AQ9Y2K7 1162 aa25.46■■□□□ 1.67
ITGB4-205ENST00000579211 DCAF11Q8TEB1 546 aa25.44■■□□□ 1.66
ITGB4-205ENST00000579211 ROBO1Q9Y6N7 1651 aa25.44■■□□□ 1.66
ITGB4-205ENST00000579211 CADPS2Q86UW7 1296 aa25.43■■□□□ 1.66
ITGB4-205ENST00000579211 SLAIN2Q9P270 581 aa25.43■■□□□ 1.66
ITGB4-205ENST00000579211 LAMC1P11047 1609 aa25.43■■□□□ 1.66
ITGB4-205ENST00000579211 MYOM2P54296 1465 aa25.42■■□□□ 1.66
ITGB4-205ENST00000579211 PIK3C2GO75747 1445 aa25.42■■□□□ 1.66
ITGB4-205ENST00000579211 STK26Q9P289 416 aa25.41■■□□□ 1.66
ITGB4-205ENST00000579211 TMEM132EQ6IEE7 984 aa25.39■■□□□ 1.66
ITGB4-205ENST00000579211 NALCNQ8IZF0 1738 aa25.39■■□□□ 1.65
ITGB4-205ENST00000579211 FAM135BQ49AJ0 1406 aa25.37■■□□□ 1.65
ITGB4-205ENST00000579211 STAC3Q96MF2 364 aa25.37■■□□□ 1.65
ITGB4-205ENST00000579211 PTCH1Q13635 1447 aa25.37■■□□□ 1.65
ITGB4-205ENST00000579211 CFAP70Q5T0N1 1121 aa25.36■■□□□ 1.65
ITGB4-205ENST00000579211 C14orf93Q9H972 538 aaKnown RBP25.36■■□□□ 1.65
ITGB4-205ENST00000579211 KNDC1Q76NI1 1749 aa25.36■■□□□ 1.65
ITGB4-205ENST00000579211 NRXN1Q9ULB1 1477 aa25.35■■□□□ 1.65
ITGB4-205ENST00000579211 DHX57Q6P158 1386 aaKnown RBP25.34■■□□□ 1.65
ITGB4-205ENST00000579211 ROBO2Q9HCK4 1378 aa25.34■■□□□ 1.65
ITGB4-205ENST00000579211 PHLPP1O60346 1717 aa25.34■■□□□ 1.65
ITGB4-205ENST00000579211 ADGRL3Q9HAR2 1447 aa25.33■■□□□ 1.65
ITGB4-205ENST00000579211 LRPPRCP42704 1394 aaKnown RBP25.32■■□□□ 1.64
ITGB4-205ENST00000579211 DCCP43146 1447 aa25.32■■□□□ 1.64
ITGB4-205ENST00000579211 YTHDC2Q9H6S0 1430 aaKnown RBP25.31■■□□□ 1.64
ITGB4-205ENST00000579211 NEUROD1Q13562 356 aa25.31■■□□□ 1.64
ITGB4-205ENST00000579211 ASXL1Q8IXJ9 1541 aa25.3■■□□□ 1.64
ITGB4-205ENST00000579211 ABCC11Q96J66 1382 aa25.28■■□□□ 1.64
ITGB4-205ENST00000579211 PRAG1Q86YV5 1406 aa25.28■■□□□ 1.64
ITGB4-205ENST00000579211 WAPLQ7Z5K2 1190 aa25.27■■□□□ 1.64
ITGB4-205ENST00000579211 SIN3AQ96ST3 1273 aa25.27■■□□□ 1.64
ITGB4-205ENST00000579211 TECPR2O15040 1411 aa25.25■■□□□ 1.63
ITGB4-205ENST00000579211 DISP3Q9P2K9 1392 aa25.24■■□□□ 1.63
ITGB4-205ENST00000579211 MST1RQ04912 1400 aa25.23■■□□□ 1.63
ITGB4-205ENST00000579211 POGKQ9P215 609 aa25.23■■□□□ 1.63
ITGB4-205ENST00000579211 KIAA1210Q9ULL0 1709 aa25.21■■□□□ 1.63
ITGB4-205ENST00000579211 SIRT1Q96EB6 747 aa25.21■■□□□ 1.63
ITGB4-205ENST00000579211 BRINP3Q76B58 766 aa25.2■■□□□ 1.62
ITGB4-205ENST00000579211 TRAK1Q9UPV9 953 aa25.2■■□□□ 1.62
ITGB4-205ENST00000579211 SAFB2Q14151 953 aaKnown RBP eCLIP25.19■■□□□ 1.62
ITGB4-205ENST00000579211 PLEKHH1Q9ULM0 1364 aa25.18■■□□□ 1.62
Retrieved 100 of 20,778 RNA–protein pairs in 18.2 ms