RNA–Protein interactions for RNA: ENST00000578993.5

LIMD2-206, Transcript of LIM domain containing 2, humanhuman

TSL 3 BASIC

Gene LIMD2, Length 602 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMD2-206ENST00000578993 SLC26A8Q96RN1 970 aa30.86■■■□□ 2.53
LIMD2-206ENST00000578993 SCAF1Q9H7N4 1312 aaKnown RBP30.82■■■□□ 2.52
LIMD2-206ENST00000578993 PLEKHG1Q9ULL1 1385 aa30.81■■■□□ 2.52
LIMD2-206ENST00000578993 NWD1Q149M9 1564 aa30.81■■■□□ 2.52
LIMD2-206ENST00000578993 SENP3Q9H4L4 574 aaPredicted RBP30.81■■■□□ 2.52
LIMD2-206ENST00000578993 CHGAP10645 457 aaKnown RBP30.8■■■□□ 2.52
LIMD2-206ENST00000578993 HFM1A2PYH4 1435 aa30.8■■■□□ 2.52
LIMD2-206ENST00000578993 CHD2O14647 1828 aaKnown RBP30.79■■■□□ 2.52
LIMD2-206ENST00000578993 KCNA6P17658 529 aa30.78■■■□□ 2.52
LIMD2-206ENST00000578993 HSPA1LP34931 641 aa30.78■■■□□ 2.52
LIMD2-206ENST00000578993 DISP3Q9P2K9 1392 aa30.76■■■□□ 2.51
LIMD2-206ENST00000578993 NUTM2DQ5VT03 806 aaPredicted RBP30.74■■■□□ 2.51
LIMD2-206ENST00000578993 CLTCL1P53675 1640 aa30.73■■■□□ 2.51
LIMD2-206ENST00000578993 PPP1R15AO75807 674 aaPredicted RBP30.73■■■□□ 2.51
LIMD2-206ENST00000578993 TMEM94Q12767 1356 aa30.72■■■□□ 2.51
LIMD2-206ENST00000578993 BCANQ96GW7 911 aa30.72■■■□□ 2.51
LIMD2-206ENST00000578993 ADAMTS13Q76LX8 1427 aa30.72■■■□□ 2.51
LIMD2-206ENST00000578993 NKTRP30414 1462 aaKnown RBP30.71■■■□□ 2.51
LIMD2-206ENST00000578993 HDGFP51858 240 aaKnown RBP30.71■■■□□ 2.51
LIMD2-206ENST00000578993 TRPM2O94759 1503 aa30.7■■■□□ 2.51
LIMD2-206ENST00000578993 ABCF1Q8NE71 845 aaKnown RBP eCLIP30.7■■■□□ 2.51
LIMD2-206ENST00000578993 RBM33Q96EV2 1170 aaKnown RBP30.69■■■□□ 2.5
LIMD2-206ENST00000578993 PROSER2Q86WR7 435 aaPredicted RBP30.66■■■□□ 2.5
LIMD2-206ENST00000578993 TBX22Q9Y458 520 aa30.66■■■□□ 2.5
LIMD2-206ENST00000578993 DIP2AQ14689 1571 aa30.66■■■□□ 2.5
LIMD2-206ENST00000578993 NRXN3Q9Y4C0 1643 aa30.65■■■□□ 2.5
LIMD2-206ENST00000578993 KIF1BO60333 1816 aa30.64■■■□□ 2.5
LIMD2-206ENST00000578993 ILDR2Q71H61 639 aa30.63■■■□□ 2.49
LIMD2-206ENST00000578993 TRIM52Q96A61 297 aa30.63■■■□□ 2.49
LIMD2-206ENST00000578993 NEXMIFQ5QGS0 1516 aa30.59■■■□□ 2.49
LIMD2-206ENST00000578993 SETBP1Q9Y6X0 1596 aa30.58■■■□□ 2.49
LIMD2-206ENST00000578993 MED1Q15648 1581 aaPredicted RBP30.57■■■□□ 2.48
LIMD2-206ENST00000578993 PTPRUQ92729 1446 aa30.56■■■□□ 2.48
LIMD2-206ENST00000578993 SLC4A1APQ9BWU0 796 aaKnown RBP30.55■■■□□ 2.48
LIMD2-206ENST00000578993 ROBO1Q9Y6N7 1651 aa30.55■■■□□ 2.48
LIMD2-206ENST00000578993 PIK3R4Q99570 1358 aa30.54■■■□□ 2.48
LIMD2-206ENST00000578993 ZNF326Q5BKZ1 582 aaKnown RBP30.54■■■□□ 2.48
LIMD2-206ENST00000578993 FAM135BQ49AJ0 1406 aa30.54■■■□□ 2.48
LIMD2-206ENST00000578993 XRN1Q8IZH2 1706 aaKnown RBP30.5■■■□□ 2.47
LIMD2-206ENST00000578993 MSH6P52701 1360 aa30.5■■■□□ 2.47
LIMD2-206ENST00000578993 FOXD1Q16676 465 aa30.48■■■□□ 2.47
LIMD2-206ENST00000578993 SIPA1L2Q9P2F8 1722 aaPredicted RBP30.47■■■□□ 2.47
LIMD2-206ENST00000578993 NCOA3Q9Y6Q9 1424 aa30.47■■■□□ 2.47
LIMD2-206ENST00000578993 METP08581 1390 aa30.45■■■□□ 2.47
LIMD2-206ENST00000578993 AMOTL2Q9Y2J4 779 aa30.45■■■□□ 2.47
LIMD2-206ENST00000578993 PPLO60437 1756 aa30.45■■■□□ 2.46
LIMD2-206ENST00000578993 SETD1AO15047 1707 aaKnown RBP30.44■■■□□ 2.46
LIMD2-206ENST00000578993 SLAIN2Q9P270 581 aa30.41■■■□□ 2.46
LIMD2-206ENST00000578993 MPHOSPH9Q99550 1183 aa30.39■■■□□ 2.46
LIMD2-206ENST00000578993 SETD5Q9C0A6 1442 aa30.36■■■□□ 2.45
LIMD2-206ENST00000578993 PHLPP1O60346 1717 aa30.35■■■□□ 2.45
LIMD2-206ENST00000578993 C14orf37Q86TY3 774 aa30.34■■■□□ 2.45
LIMD2-206ENST00000578993 C19orf44Q9H6X5 657 aa30.34■■■□□ 2.45
LIMD2-206ENST00000578993 RPGRIP1LQ68CZ1 1315 aa30.33■■■□□ 2.45
LIMD2-206ENST00000578993 IFT172Q9UG01 1749 aa30.33■■■□□ 2.45
LIMD2-206ENST00000578993 VGFO15240 615 aaPredicted RBP30.31■■■□□ 2.44
LIMD2-206ENST00000578993 CCDC144AA2RUR9 1427 aa30.3■■■□□ 2.44
LIMD2-206ENST00000578993 SPATA31E1Q6ZUB1 1445 aa30.3■■■□□ 2.44
LIMD2-206ENST00000578993 NALCNQ8IZF0 1738 aa30.29■■■□□ 2.44
LIMD2-206ENST00000578993 SOCS7O14512 581 aa30.28■■■□□ 2.44
LIMD2-206ENST00000578993 CADPS2Q86UW7 1296 aa30.28■■■□□ 2.44
LIMD2-206ENST00000578993 COL16A1Q07092 1604 aaPredicted RBP30.28■■■□□ 2.44
LIMD2-206ENST00000578993 RAB3GAP2Q9H2M9 1393 aa30.27■■■□□ 2.44
LIMD2-206ENST00000578993 ATF3P18847 181 aa30.26■■■□□ 2.43
LIMD2-206ENST00000578993 DCCP43146 1447 aa30.25■■■□□ 2.43
LIMD2-206ENST00000578993 AHDC1Q5TGY3 1603 aaPredicted RBP30.22■■■□□ 2.43
LIMD2-206ENST00000578993 ADGRL3Q9HAR2 1447 aa30.22■■■□□ 2.43
LIMD2-206ENST00000578993 ADGRF5Q8IZF2 1346 aa30.22■■■□□ 2.43
LIMD2-206ENST00000578993 RGL3Q3MIN7 710 aa30.21■■■□□ 2.43
LIMD2-206ENST00000578993 MST1RQ04912 1400 aa30.21■■■□□ 2.43
LIMD2-206ENST00000578993 ROBO2Q9HCK4 1378 aa30.2■■■□□ 2.43
LIMD2-206ENST00000578993 PHF23Q9BUL5 403 aaPredicted RBP30.2■■■□□ 2.43
LIMD2-206ENST00000578993 PTCH1Q13635 1447 aa30.2■■■□□ 2.42
LIMD2-206ENST00000578993 PRAG1Q86YV5 1406 aa30.2■■■□□ 2.42
LIMD2-206ENST00000578993 ACIN1Q9UKV3 1341 aaKnown RBP30.19■■■□□ 2.42
LIMD2-206ENST00000578993 RGS17Q9UGC6 210 aaPredicted RBP30.18■■■□□ 2.42
LIMD2-206ENST00000578993 BRINP3Q76B58 766 aa30.17■■■□□ 2.42
LIMD2-206ENST00000578993 ASXL1Q8IXJ9 1541 aa30.15■■■□□ 2.42
LIMD2-206ENST00000578993 NHSL1Q5SYE7 1610 aa30.14■■■□□ 2.41
LIMD2-206ENST00000578993 ANKRD30BQ9BXX2 1392 aa30.14■■■□□ 2.41
LIMD2-206ENST00000578993 JCADQ9P266 1359 aa30.14■■■□□ 2.41
LIMD2-206ENST00000578993 PIK3C2GO75747 1445 aa30.11■■■□□ 2.41
LIMD2-206ENST00000578993 SHPRHQ149N8 1683 aa30.11■■■□□ 2.41
LIMD2-206ENST00000578993 KNDC1Q76NI1 1749 aa30.05■■■□□ 2.4
LIMD2-206ENST00000578993 LRP6O75581 1613 aa30.05■■■□□ 2.4
LIMD2-206ENST00000578993 C1orf167Q5SNV9 1468 aa30.05■■■□□ 2.4
LIMD2-206ENST00000578993 NRXN1Q9ULB1 1477 aa30.05■■■□□ 2.4
LIMD2-206ENST00000578993 TECPR2O15040 1411 aa30.04■■■□□ 2.4
LIMD2-206ENST00000578993 TMEM132EQ6IEE7 984 aa30.02■■■□□ 2.4
LIMD2-206ENST00000578993 MYOM2P54296 1465 aa30.01■■■□□ 2.4
LIMD2-206ENST00000578993 LAMC1P11047 1609 aa30.01■■■□□ 2.39
LIMD2-206ENST00000578993 LRPPRCP42704 1394 aaKnown RBP30.01■■■□□ 2.39
LIMD2-206ENST00000578993 HRCP23327 699 aa30■■■□□ 2.39
LIMD2-206ENST00000578993 DDX17Q92841 729 aaKnown RBP30■■■□□ 2.39
LIMD2-206ENST00000578993 CDC42BPGQ6DT37 1551 aa29.98■■■□□ 2.39
LIMD2-206ENST00000578993 POTEAQ6S8J7 498 aa29.98■■■□□ 2.39
LIMD2-206ENST00000578993 STK26Q9P289 416 aa29.98■■■□□ 2.39
LIMD2-206ENST00000578993 SPATA31A6Q5VVP1 1343 aa29.97■■■□□ 2.39
LIMD2-206ENST00000578993 ABCC11Q96J66 1382 aa29.97■■■□□ 2.39
LIMD2-206ENST00000578993 PLEKHH1Q9ULM0 1364 aa29.96■■■□□ 2.39
Retrieved 100 of 20,778 RNA–protein pairs in 15.2 ms