RNA–Protein interactions for RNA: ENST00000574158.1

POLR2A-203, Transcript of RNA polymerase II subunit A, humanhuman

TSL 2

Gene POLR2A, Length 461 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
POLR2A-203ENST00000574158 PLEKHG1Q9ULL1 1385 aa21.11■□□□□ 0.97
POLR2A-203ENST00000574158 ALKQ9UM73 1620 aa21.11■□□□□ 0.97
POLR2A-203ENST00000574158 KIF1BO60333 1816 aa21.1■□□□□ 0.97
POLR2A-203ENST00000574158 DIP2AQ14689 1571 aa21.07■□□□□ 0.96
POLR2A-203ENST00000574158 UBAP1LF5GYI3 381 aa21.07■□□□□ 0.96
POLR2A-203ENST00000574158 CHGAP10645 457 aaKnown RBP21.07■□□□□ 0.96
POLR2A-203ENST00000574158 TRIM52Q96A61 297 aa21.07■□□□□ 0.96
POLR2A-203ENST00000574158 CHD2O14647 1828 aaKnown RBP21.06■□□□□ 0.96
POLR2A-203ENST00000574158 NRXN3Q9Y4C0 1643 aa21.05■□□□□ 0.96
POLR2A-203ENST00000574158 NKTRP30414 1462 aaKnown RBP21.05■□□□□ 0.96
POLR2A-203ENST00000574158 NEXMIFQ5QGS0 1516 aa21.04■□□□□ 0.96
POLR2A-203ENST00000574158 SLC26A8Q96RN1 970 aa21.04■□□□□ 0.96
POLR2A-203ENST00000574158 ADAMTS13Q76LX8 1427 aa21.04■□□□□ 0.96
POLR2A-203ENST00000574158 PPP1R15AO75807 674 aaPredicted RBP21.03■□□□□ 0.96
POLR2A-203ENST00000574158 ABCF1Q8NE71 845 aaKnown RBP eCLIP21.03■□□□□ 0.96
POLR2A-203ENST00000574158 SETBP1Q9Y6X0 1596 aa21.02■□□□□ 0.96
POLR2A-203ENST00000574158 SLC4A1APQ9BWU0 796 aaKnown RBP21.02■□□□□ 0.96
POLR2A-203ENST00000574158 HDGFP51858 240 aaKnown RBP21.01■□□□□ 0.95
POLR2A-203ENST00000574158 SETD5Q9C0A6 1442 aa21.01■□□□□ 0.95
POLR2A-203ENST00000574158 KCNA6P17658 529 aa20.99■□□□□ 0.95
POLR2A-203ENST00000574158 NUTM2DQ5VT03 806 aaPredicted RBP20.98■□□□□ 0.95
POLR2A-203ENST00000574158 SENP3Q9H4L4 574 aaPredicted RBP20.98■□□□□ 0.95
POLR2A-203ENST00000574158 PPLO60437 1756 aa20.97■□□□□ 0.95
POLR2A-203ENST00000574158 TMEM94Q12767 1356 aa20.97■□□□□ 0.95
POLR2A-203ENST00000574158 TOM1O60784 492 aa20.96■□□□□ 0.95
POLR2A-203ENST00000574158 BCANQ96GW7 911 aa20.96■□□□□ 0.95
POLR2A-203ENST00000574158 XRN1Q8IZH2 1706 aaKnown RBP20.95■□□□□ 0.94
POLR2A-203ENST00000574158 TBX22Q9Y458 520 aa20.95■□□□□ 0.94
POLR2A-203ENST00000574158 RAB3GAP2Q9H2M9 1393 aa20.95■□□□□ 0.94
POLR2A-203ENST00000574158 FOXD1Q16676 465 aa20.94■□□□□ 0.94
POLR2A-203ENST00000574158 PIK3R4Q99570 1358 aa20.94■□□□□ 0.94
POLR2A-203ENST00000574158 SETD1AO15047 1707 aaKnown RBP20.93■□□□□ 0.94
POLR2A-203ENST00000574158 ZNF326Q5BKZ1 582 aaKnown RBP20.92■□□□□ 0.94
POLR2A-203ENST00000574158 MPHOSPH9Q99550 1183 aa20.92■□□□□ 0.94
POLR2A-203ENST00000574158 IFT172Q9UG01 1749 aa20.92■□□□□ 0.94
POLR2A-203ENST00000574158 PIP4K2BP78356 416 aa20.91■□□□□ 0.94
POLR2A-203ENST00000574158 ACIN1Q9UKV3 1341 aaKnown RBP20.91■□□□□ 0.94
POLR2A-203ENST00000574158 CCDC144AA2RUR9 1427 aa20.9■□□□□ 0.94
POLR2A-203ENST00000574158 PTPRUQ92729 1446 aa20.9■□□□□ 0.94
POLR2A-203ENST00000574158 SCAF1Q9H7N4 1312 aaKnown RBP20.89■□□□□ 0.93
POLR2A-203ENST00000574158 PROSER2Q86WR7 435 aaPredicted RBP20.89■□□□□ 0.93
POLR2A-203ENST00000574158 SPATA31E1Q6ZUB1 1445 aa20.88■□□□□ 0.93
POLR2A-203ENST00000574158 RBM33Q96EV2 1170 aaKnown RBP20.86■□□□□ 0.93
POLR2A-203ENST00000574158 HSPA1LP34931 641 aa20.84■□□□□ 0.93
POLR2A-203ENST00000574158 NCOA3Q9Y6Q9 1424 aa20.84■□□□□ 0.93
POLR2A-203ENST00000574158 METP08581 1390 aa20.84■□□□□ 0.93
POLR2A-203ENST00000574158 ROBO1Q9Y6N7 1651 aa20.83■□□□□ 0.93
POLR2A-203ENST00000574158 RPGRIP1LQ68CZ1 1315 aa20.83■□□□□ 0.93
POLR2A-203ENST00000574158 SIPA1L2Q9P2F8 1722 aaPredicted RBP20.83■□□□□ 0.92
POLR2A-203ENST00000574158 MSH6P52701 1360 aa20.83■□□□□ 0.92
POLR2A-203ENST00000574158 FAM135BQ49AJ0 1406 aa20.79■□□□□ 0.92
POLR2A-203ENST00000574158 VGFO15240 615 aaPredicted RBP20.79■□□□□ 0.92
POLR2A-203ENST00000574158 AMOTL2Q9Y2J4 779 aa20.79■□□□□ 0.92
POLR2A-203ENST00000574158 PRAG1Q86YV5 1406 aa20.78■□□□□ 0.92
POLR2A-203ENST00000574158 NALCNQ8IZF0 1738 aa20.78■□□□□ 0.92
POLR2A-203ENST00000574158 HRCP23327 699 aa20.76■□□□□ 0.91
POLR2A-203ENST00000574158 PTCH1Q13635 1447 aa20.76■□□□□ 0.91
POLR2A-203ENST00000574158 ANKRD30BQ9BXX2 1392 aa20.75■□□□□ 0.91
POLR2A-203ENST00000574158 MED1Q15648 1581 aaPredicted RBP20.75■□□□□ 0.91
POLR2A-203ENST00000574158 ASXL1Q8IXJ9 1541 aa20.74■□□□□ 0.91
POLR2A-203ENST00000574158 DCCP43146 1447 aa20.74■□□□□ 0.91
POLR2A-203ENST00000574158 PIK3C2GO75747 1445 aa20.73■□□□□ 0.91
POLR2A-203ENST00000574158 MYOM2P54296 1465 aa20.73■□□□□ 0.91
POLR2A-203ENST00000574158 ADGRF5Q8IZF2 1346 aa20.73■□□□□ 0.91
POLR2A-203ENST00000574158 DISP3Q9P2K9 1392 aa20.72■□□□□ 0.91
POLR2A-203ENST00000574158 ADGRL3Q9HAR2 1447 aa20.72■□□□□ 0.91
POLR2A-203ENST00000574158 RGL3Q3MIN7 710 aa20.72■□□□□ 0.91
POLR2A-203ENST00000574158 NRXN1Q9ULB1 1477 aa20.72■□□□□ 0.91
POLR2A-203ENST00000574158 KNDC1Q76NI1 1749 aa20.71■□□□□ 0.91
POLR2A-203ENST00000574158 C14orf37Q86TY3 774 aa20.7■□□□□ 0.9
POLR2A-203ENST00000574158 C19orf44Q9H6X5 657 aa20.7■□□□□ 0.9
POLR2A-203ENST00000574158 LAMC1P11047 1609 aa20.7■□□□□ 0.9
POLR2A-203ENST00000574158 PHLPP1O60346 1717 aa20.7■□□□□ 0.9
POLR2A-203ENST00000574158 SLAIN2Q9P270 581 aa20.69■□□□□ 0.9
POLR2A-203ENST00000574158 ROBO2Q9HCK4 1378 aa20.69■□□□□ 0.9
POLR2A-203ENST00000574158 COL16A1Q07092 1604 aaPredicted RBP20.67■□□□□ 0.9
POLR2A-203ENST00000574158 AHDC1Q5TGY3 1603 aaPredicted RBP20.67■□□□□ 0.9
POLR2A-203ENST00000574158 CADPS2Q86UW7 1296 aa20.66■□□□□ 0.9
POLR2A-203ENST00000574158 TECPR2O15040 1411 aa20.66■□□□□ 0.9
POLR2A-203ENST00000574158 MST1RQ04912 1400 aa20.65■□□□□ 0.9
POLR2A-203ENST00000574158 ATF3P18847 181 aa20.63■□□□□ 0.89
POLR2A-203ENST00000574158 NHSL1Q5SYE7 1610 aa20.62■□□□□ 0.89
POLR2A-203ENST00000574158 LRPPRCP42704 1394 aaKnown RBP20.61■□□□□ 0.89
POLR2A-203ENST00000574158 CDC42BPGQ6DT37 1551 aa20.61■□□□□ 0.89
POLR2A-203ENST00000574158 YTHDC2Q9H6S0 1430 aaKnown RBP20.58■□□□□ 0.88
POLR2A-203ENST00000574158 ABCC11Q96J66 1382 aa20.58■□□□□ 0.88
POLR2A-203ENST00000574158 ADGRB1O14514 1584 aa20.57■□□□□ 0.88
POLR2A-203ENST00000574158 BRINP3Q76B58 766 aa20.57■□□□□ 0.88
POLR2A-203ENST00000574158 SHPRHQ149N8 1683 aa20.56■□□□□ 0.88
POLR2A-203ENST00000574158 TMEM132EQ6IEE7 984 aa20.55■□□□□ 0.88
POLR2A-203ENST00000574158 C14orf93Q9H972 538 aaKnown RBP20.55■□□□□ 0.88
POLR2A-203ENST00000574158 DHX57Q6P158 1386 aaKnown RBP20.55■□□□□ 0.88
POLR2A-203ENST00000574158 C1orf167Q5SNV9 1468 aa20.55■□□□□ 0.88
POLR2A-203ENST00000574158 ILDR2Q71H61 639 aa20.54■□□□□ 0.88
POLR2A-203ENST00000574158 CFAP70Q5T0N1 1121 aa20.53■□□□□ 0.88
POLR2A-203ENST00000574158 PLEKHH1Q9ULM0 1364 aa20.53■□□□□ 0.88
POLR2A-203ENST00000574158 FMN2Q9NZ56 1722 aa20.53■□□□□ 0.88
POLR2A-203ENST00000574158 DLC1Q96QB1 1528 aa20.53■□□□□ 0.88
POLR2A-203ENST00000574158 JCADQ9P266 1359 aa20.52■□□□□ 0.88
POLR2A-203ENST00000574158 STK26Q9P289 416 aa20.52■□□□□ 0.88
Retrieved 100 of 20,778 RNA–protein pairs in 16.9 ms