RNA–Protein interactions for RNA: ENST00000573827.1

SMG6-214, Transcript of SMG6, nonsense mediated mRNA decay factor, humanhuman

TSL 3

Gene SMG6, Length 601 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG6-214ENST00000573827 TOM1O60784 492 aa26.45■■□□□ 1.82
SMG6-214ENST00000573827 NWD1Q149M9 1564 aa26.42■■□□□ 1.82
SMG6-214ENST00000573827 KCNA6P17658 529 aa26.42■■□□□ 1.82
SMG6-214ENST00000573827 SPHKAPQ2M3C7 1700 aa26.42■■□□□ 1.82
SMG6-214ENST00000573827 PIP4K2BP78356 416 aa26.39■■□□□ 1.82
SMG6-214ENST00000573827 ADAMTS13Q76LX8 1427 aa26.39■■□□□ 1.81
SMG6-214ENST00000573827 HSPA1LP34931 641 aa26.37■■□□□ 1.81
SMG6-214ENST00000573827 TMEM94Q12767 1356 aa26.36■■□□□ 1.81
SMG6-214ENST00000573827 TRPM2O94759 1503 aa26.36■■□□□ 1.81
SMG6-214ENST00000573827 CHGAP10645 457 aaKnown RBP26.36■■□□□ 1.81
SMG6-214ENST00000573827 ABCF1Q8NE71 845 aaKnown RBP eCLIP26.35■■□□□ 1.81
SMG6-214ENST00000573827 NKTRP30414 1462 aaKnown RBP26.35■■□□□ 1.81
SMG6-214ENST00000573827 HDGFP51858 240 aaKnown RBP26.34■■□□□ 1.81
SMG6-214ENST00000573827 TBX22Q9Y458 520 aa26.34■■□□□ 1.81
SMG6-214ENST00000573827 CLTCL1P53675 1640 aa26.34■■□□□ 1.81
SMG6-214ENST00000573827 NUTM2DQ5VT03 806 aaPredicted RBP26.33■■□□□ 1.81
SMG6-214ENST00000573827 PPP1R15AO75807 674 aaPredicted RBP26.32■■□□□ 1.8
SMG6-214ENST00000573827 SENP3Q9H4L4 574 aaPredicted RBP26.32■■□□□ 1.8
SMG6-214ENST00000573827 CHD2O14647 1828 aaKnown RBP26.32■■□□□ 1.8
SMG6-214ENST00000573827 SCAF1Q9H7N4 1312 aaKnown RBP26.31■■□□□ 1.8
SMG6-214ENST00000573827 DIP2AQ14689 1571 aa26.29■■□□□ 1.8
SMG6-214ENST00000573827 NRXN3Q9Y4C0 1643 aa26.28■■□□□ 1.8
SMG6-214ENST00000573827 RBM33Q96EV2 1170 aaKnown RBP26.27■■□□□ 1.8
SMG6-214ENST00000573827 BCANQ96GW7 911 aa26.27■■□□□ 1.8
SMG6-214ENST00000573827 DISP3Q9P2K9 1392 aa26.27■■□□□ 1.8
SMG6-214ENST00000573827 PROSER2Q86WR7 435 aaPredicted RBP26.26■■□□□ 1.79
SMG6-214ENST00000573827 PIK3R4Q99570 1358 aa26.25■■□□□ 1.79
SMG6-214ENST00000573827 TRIM52Q96A61 297 aa26.25■■□□□ 1.79
SMG6-214ENST00000573827 SETBP1Q9Y6X0 1596 aa26.24■■□□□ 1.79
SMG6-214ENST00000573827 NEXMIFQ5QGS0 1516 aa26.24■■□□□ 1.79
SMG6-214ENST00000573827 PTPRUQ92729 1446 aa26.23■■□□□ 1.79
SMG6-214ENST00000573827 SLC4A1APQ9BWU0 796 aaKnown RBP26.23■■□□□ 1.79
SMG6-214ENST00000573827 FAM135BQ49AJ0 1406 aa26.21■■□□□ 1.79
SMG6-214ENST00000573827 ILDR2Q71H61 639 aa26.19■■□□□ 1.78
SMG6-214ENST00000573827 NCOA3Q9Y6Q9 1424 aa26.18■■□□□ 1.78
SMG6-214ENST00000573827 KIF1BO60333 1816 aa26.17■■□□□ 1.78
SMG6-214ENST00000573827 ZNF326Q5BKZ1 582 aaKnown RBP26.16■■□□□ 1.78
SMG6-214ENST00000573827 XRN1Q8IZH2 1706 aaKnown RBP26.15■■□□□ 1.78
SMG6-214ENST00000573827 FOXD1Q16676 465 aa26.15■■□□□ 1.78
SMG6-214ENST00000573827 METP08581 1390 aa26.14■■□□□ 1.78
SMG6-214ENST00000573827 MED1Q15648 1581 aaPredicted RBP26.13■■□□□ 1.77
SMG6-214ENST00000573827 MSH6P52701 1360 aa26.13■■□□□ 1.77
SMG6-214ENST00000573827 MPHOSPH9Q99550 1183 aa26.12■■□□□ 1.77
SMG6-214ENST00000573827 AMOTL2Q9Y2J4 779 aa26.12■■□□□ 1.77
SMG6-214ENST00000573827 SETD5Q9C0A6 1442 aa26.11■■□□□ 1.77
SMG6-214ENST00000573827 ROBO1Q9Y6N7 1651 aa26.1■■□□□ 1.77
SMG6-214ENST00000573827 SETD1AO15047 1707 aaKnown RBP26.08■■□□□ 1.76
SMG6-214ENST00000573827 SPATA31E1Q6ZUB1 1445 aa26.07■■□□□ 1.76
SMG6-214ENST00000573827 SLAIN2Q9P270 581 aa26.07■■□□□ 1.76
SMG6-214ENST00000573827 RPGRIP1LQ68CZ1 1315 aa26.07■■□□□ 1.76
SMG6-214ENST00000573827 SIPA1L2Q9P2F8 1722 aaPredicted RBP26.05■■□□□ 1.76
SMG6-214ENST00000573827 PPLO60437 1756 aa26.05■■□□□ 1.76
SMG6-214ENST00000573827 C19orf44Q9H6X5 657 aa26.04■■□□□ 1.76
SMG6-214ENST00000573827 RAB3GAP2Q9H2M9 1393 aa26.03■■□□□ 1.76
SMG6-214ENST00000573827 VGFO15240 615 aaPredicted RBP26.02■■□□□ 1.76
SMG6-214ENST00000573827 CCDC144AA2RUR9 1427 aa26.02■■□□□ 1.76
SMG6-214ENST00000573827 PRAG1Q86YV5 1406 aa26.01■■□□□ 1.75
SMG6-214ENST00000573827 ACIN1Q9UKV3 1341 aaKnown RBP25.99■■□□□ 1.75
SMG6-214ENST00000573827 DCCP43146 1447 aa25.98■■□□□ 1.75
SMG6-214ENST00000573827 CADPS2Q86UW7 1296 aa25.98■■□□□ 1.75
SMG6-214ENST00000573827 C14orf37Q86TY3 774 aa25.96■■□□□ 1.75
SMG6-214ENST00000573827 PTCH1Q13635 1447 aa25.96■■□□□ 1.75
SMG6-214ENST00000573827 ADGRF5Q8IZF2 1346 aa25.95■■□□□ 1.75
SMG6-214ENST00000573827 IFT172Q9UG01 1749 aa25.95■■□□□ 1.74
SMG6-214ENST00000573827 ADGRL3Q9HAR2 1447 aa25.94■■□□□ 1.74
SMG6-214ENST00000573827 ROBO2Q9HCK4 1378 aa25.94■■□□□ 1.74
SMG6-214ENST00000573827 COL16A1Q07092 1604 aaPredicted RBP25.93■■□□□ 1.74
SMG6-214ENST00000573827 ATF3P18847 181 aa25.93■■□□□ 1.74
SMG6-214ENST00000573827 MST1RQ04912 1400 aa25.92■■□□□ 1.74
SMG6-214ENST00000573827 SOCS7O14512 581 aa25.91■■□□□ 1.74
SMG6-214ENST00000573827 AHDC1Q5TGY3 1603 aaPredicted RBP25.91■■□□□ 1.74
SMG6-214ENST00000573827 NALCNQ8IZF0 1738 aa25.91■■□□□ 1.74
SMG6-214ENST00000573827 RGL3Q3MIN7 710 aa25.9■■□□□ 1.74
SMG6-214ENST00000573827 PHLPP1O60346 1717 aa25.9■■□□□ 1.74
SMG6-214ENST00000573827 ANKRD30BQ9BXX2 1392 aa25.9■■□□□ 1.74
SMG6-214ENST00000573827 BRINP3Q76B58 766 aa25.89■■□□□ 1.74
SMG6-214ENST00000573827 RGS17Q9UGC6 210 aaPredicted RBP25.88■■□□□ 1.73
SMG6-214ENST00000573827 ASXL1Q8IXJ9 1541 aa25.88■■□□□ 1.73
SMG6-214ENST00000573827 PIK3C2GO75747 1445 aa25.88■■□□□ 1.73
SMG6-214ENST00000573827 HRCP23327 699 aa25.87■■□□□ 1.73
SMG6-214ENST00000573827 NRXN1Q9ULB1 1477 aa25.85■■□□□ 1.73
SMG6-214ENST00000573827 JCADQ9P266 1359 aa25.83■■□□□ 1.73
SMG6-214ENST00000573827 TECPR2O15040 1411 aa25.83■■□□□ 1.73
SMG6-214ENST00000573827 MYOM2P54296 1465 aa25.79■■□□□ 1.72
SMG6-214ENST00000573827 PHF23Q9BUL5 403 aaPredicted RBP25.79■■□□□ 1.72
SMG6-214ENST00000573827 LRPPRCP42704 1394 aaKnown RBP25.79■■□□□ 1.72
SMG6-214ENST00000573827 C1orf167Q5SNV9 1468 aa25.79■■□□□ 1.72
SMG6-214ENST00000573827 NHSL1Q5SYE7 1610 aa25.78■■□□□ 1.72
SMG6-214ENST00000573827 ABCC11Q96J66 1382 aa25.77■■□□□ 1.72
SMG6-214ENST00000573827 LRP6O75581 1613 aa25.75■■□□□ 1.71
SMG6-214ENST00000573827 TMEM132EQ6IEE7 984 aa25.75■■□□□ 1.71
SMG6-214ENST00000573827 C14orf93Q9H972 538 aaKnown RBP25.75■■□□□ 1.71
SMG6-214ENST00000573827 SHPRHQ149N8 1683 aa25.74■■□□□ 1.71
SMG6-214ENST00000573827 KNDC1Q76NI1 1749 aa25.74■■□□□ 1.71
SMG6-214ENST00000573827 LAMC1P11047 1609 aa25.74■■□□□ 1.71
SMG6-214ENST00000573827 YTHDC2Q9H6S0 1430 aaKnown RBP25.72■■□□□ 1.71
SMG6-214ENST00000573827 CDC42BPGQ6DT37 1551 aa25.72■■□□□ 1.71
SMG6-214ENST00000573827 PLEKHH1Q9ULM0 1364 aa25.71■■□□□ 1.71
SMG6-214ENST00000573827 DDX17Q92841 729 aaKnown RBP25.71■■□□□ 1.71
SMG6-214ENST00000573827 SPATA31A6Q5VVP1 1343 aa25.7■■□□□ 1.71
Retrieved 100 of 20,778 RNA–protein pairs in 54.2 ms