RNA–Protein interactions for RNA: ENST00000569891.5

CYLD-216, Transcript of CYLD lysine 63 deubiquitinase, humanhuman

TSL 1 (best)

Gene CYLD, Length 4,665 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CYLD-216ENST00000569891 PTPRTO14522 1441 aa8.29□□□□□ -1.08
CYLD-216ENST00000569891 HDGFP51858 240 aaKnown RBP8.29□□□□□ -1.08
CYLD-216ENST00000569891 SLC52A1Q9NWF4 448 aa8.29□□□□□ -1.08
CYLD-216ENST00000569891 MYOM1P52179 1685 aa8.29□□□□□ -1.08
CYLD-216ENST00000569891 DMDP11532 3685 aa8.27□□□□□ -1.09
CYLD-216ENST00000569891 EFCAB6Q5THR3 1501 aa8.27□□□□□ -1.09
CYLD-216ENST00000569891 TMF1P82094 1093 aa8.27□□□□□ -1.09
CYLD-216ENST00000569891 PPLO60437 1756 aa8.27□□□□□ -1.09
CYLD-216ENST00000569891 KTN1Q86UP2 1357 aaKnown RBP8.27□□□□□ -1.09
CYLD-216ENST00000569891 CCDC7Q96M83 1385 aa8.26□□□□□ -1.09
CYLD-216ENST00000569891 CDH23Q9H251 3354 aa8.26□□□□□ -1.09
CYLD-216ENST00000569891 CHGAP10645 457 aaKnown RBP8.26□□□□□ -1.09
CYLD-216ENST00000569891 STAG3Q9UJ98 1225 aa8.26□□□□□ -1.09
CYLD-216ENST00000569891 PRAG1Q86YV5 1406 aa8.26□□□□□ -1.09
CYLD-216ENST00000569891 MUC3AQ02505 3323 aa8.26□□□□□ -1.09
CYLD-216ENST00000569891 VGFO15240 615 aaPredicted RBP8.26□□□□□ -1.09
CYLD-216ENST00000569891 ARHGAP31Q2M1Z3 1444 aa8.26□□□□□ -1.09
CYLD-216ENST00000569891 RAPGEF3O95398 923 aa8.26□□□□□ -1.09
CYLD-216ENST00000569891 NBPF8Q3BBV2 869 aa8.26□□□□□ -1.09
CYLD-216ENST00000569891 PELP1Q8IZL8 1130 aaKnown RBP8.25□□□□□ -1.09
CYLD-216ENST00000569891 LAMC1P11047 1609 aa8.25□□□□□ -1.09
CYLD-216ENST00000569891 POLR3GLQ9BT43 218 aa8.25□□□□□ -1.09
CYLD-216ENST00000569891 XIRP2A4UGR9 3374 aa8.25□□□□□ -1.09
CYLD-216ENST00000569891 AGLP35573 1532 aa8.25□□□□□ -1.09
CYLD-216ENST00000569891 GPRASP1Q5JY77 1395 aa8.24□□□□□ -1.09
CYLD-216ENST00000569891 PLA2R1Q13018 1463 aa8.24□□□□□ -1.09
CYLD-216ENST00000569891 KIF1BO60333 1816 aa8.24□□□□□ -1.09
CYLD-216ENST00000569891 HTTP42858 3142 aa8.24□□□□□ -1.09
CYLD-216ENST00000569891 UBR1Q8IWV7 1749 aa8.23□□□□□ -1.09
CYLD-216ENST00000569891 MYOM2P54296 1465 aa8.23□□□□□ -1.09
CYLD-216ENST00000569891 YTHDC1Q96MU7 727 aaKnown RBP8.23□□□□□ -1.09
CYLD-216ENST00000569891 WASHC2AQ641Q2 1341 aa8.22□□□□□ -1.09
CYLD-216ENST00000569891 SPATA31E1Q6ZUB1 1445 aa8.22□□□□□ -1.09
CYLD-216ENST00000569891 ABCC3O15438 1527 aa8.22□□□□□ -1.09
CYLD-216ENST00000569891 PREX1Q8TCU6 1659 aa8.21□□□□□ -1.09
CYLD-216ENST00000569891 ABCF1Q8NE71 845 aaKnown RBP eCLIP8.21□□□□□ -1.09
CYLD-216ENST00000569891 HIRIP3Q9BW71 556 aaPredicted RBP8.21□□□□□ -1.09
CYLD-216ENST00000569891 ASXL1Q8IXJ9 1541 aa8.21□□□□□ -1.1
CYLD-216ENST00000569891 RALBP1Q15311 655 aa8.21□□□□□ -1.1
CYLD-216ENST00000569891 SCAF11Q99590 1463 aaKnown RBP8.21□□□□□ -1.1
CYLD-216ENST00000569891 KIF7Q2M1P5 1343 aa8.2□□□□□ -1.1
CYLD-216ENST00000569891 KIAA1210Q9ULL0 1709 aa8.2□□□□□ -1.1
CYLD-216ENST00000569891 ST20-MTHFSA0A0A6YYL1 179 aa8.2□□□□□ -1.1
CYLD-216ENST00000569891 NPATQ14207 1427 aa8.19□□□□□ -1.1
CYLD-216ENST00000569891 TRPM1Q7Z4N2 1603 aa8.19□□□□□ -1.1
CYLD-216ENST00000569891 ARHGEF40Q8TER5 1519 aa8.19□□□□□ -1.1
CYLD-216ENST00000569891 NEFLP07196 543 aa8.19□□□□□ -1.1
CYLD-216ENST00000569891 CLTCL1P53675 1640 aa8.18□□□□□ -1.1
CYLD-216ENST00000569891 NOS1P29475 1434 aa8.18□□□□□ -1.1
CYLD-216ENST00000569891 TRHP20396 242 aaPredicted RBP8.18□□□□□ -1.1
CYLD-216ENST00000569891 SENP3Q9H4L4 574 aaPredicted RBP8.18□□□□□ -1.1
CYLD-216ENST00000569891 RGPD8O14715 1765 aaPredicted RBP8.18□□□□□ -1.1
CYLD-216ENST00000569891 UNC80Q8N2C7 3258 aa8.18□□□□□ -1.1
CYLD-216ENST00000569891 DNAH14Q0VDD8 3507 aa8.18□□□□□ -1.1
CYLD-216ENST00000569891 TMEM131LA2VDJ0 1609 aa8.17□□□□□ -1.1
CYLD-216ENST00000569891 YEATS2Q9ULM3 1422 aa8.17□□□□□ -1.1
CYLD-216ENST00000569891 ADGRB3O60242 1522 aa8.17□□□□□ -1.1
CYLD-216ENST00000569891 IQGAP1P46940 1657 aa8.16□□□□□ -1.1
CYLD-216ENST00000569891 USP32Q8NFA0 1604 aa8.16□□□□□ -1.1
CYLD-216ENST00000569891 ZFYVE9O95405 1425 aa8.16□□□□□ -1.1
CYLD-216ENST00000569891 MADDQ8WXG6 1647 aa8.16□□□□□ -1.1
CYLD-216ENST00000569891 KNSTRNQ9Y448 316 aa8.16□□□□□ -1.1
CYLD-216ENST00000569891 MRS2Q9HD23 443 aa8.16□□□□□ -1.1
CYLD-216ENST00000569891 PUS7Q96PZ0 661 aaKnown RBP8.15□□□□□ -1.1
CYLD-216ENST00000569891 PRKRIP1Q9H875 184 aaPredicted RBP8.15□□□□□ -1.1
CYLD-216ENST00000569891 CEP350Q5VT06 3117 aa8.15□□□□□ -1.1
CYLD-216ENST00000569891 CLTCQ00610 1675 aaKnown RBP8.15□□□□□ -1.1
CYLD-216ENST00000569891 TMC1Q8TDI8 760 aa8.15□□□□□ -1.1
CYLD-216ENST00000569891 SETBP1Q9Y6X0 1596 aa8.15□□□□□ -1.1
CYLD-216ENST00000569891 SBNO2Q9Y2G9 1366 aa8.15□□□□□ -1.11
CYLD-216ENST00000569891 VIRMAQ69YN4 1812 aaKnown RBP8.15□□□□□ -1.11
CYLD-216ENST00000569891 CENPJQ9HC77 1338 aaPredicted RBP8.14□□□□□ -1.11
CYLD-216ENST00000569891 C14orf93Q9H972 538 aaKnown RBP8.14□□□□□ -1.11
CYLD-216ENST00000569891 ERVK-7P63135 1459 aa8.13□□□□□ -1.11
CYLD-216ENST00000569891 EVC2Q86UK5 1308 aa8.13□□□□□ -1.11
CYLD-216ENST00000569891 MYBBP1AQ9BQG0 1328 aaKnown RBP8.13□□□□□ -1.11
CYLD-216ENST00000569891 MLECQ14165 292 aa8.13□□□□□ -1.11
CYLD-216ENST00000569891 NBPF1Q3BBV0 1214 aa8.13□□□□□ -1.11
CYLD-216ENST00000569891 NINLQ9Y2I6 1382 aa8.12□□□□□ -1.11
CYLD-216ENST00000569891 UGGT1Q9NYU2 1555 aa8.12□□□□□ -1.11
CYLD-216ENST00000569891 EID1Q9Y6B2 187 aa8.12□□□□□ -1.11
CYLD-216ENST00000569891 SHPRHQ149N8 1683 aa8.12□□□□□ -1.11
CYLD-216ENST00000569891 BRD4O60885 1362 aaPredicted RBP8.12□□□□□ -1.11
CYLD-216ENST00000569891 NRXN1Q9ULB1 1477 aa8.12□□□□□ -1.11
CYLD-216ENST00000569891 IDI1Q13907 227 aa8.12□□□□□ -1.11
CYLD-216ENST00000569891 NLRP13Q86W25 1043 aa8.12□□□□□ -1.11
CYLD-216ENST00000569891 POGKQ9P215 609 aa8.11□□□□□ -1.11
CYLD-216ENST00000569891 TNRQ92752 1358 aa8.11□□□□□ -1.11
CYLD-216ENST00000569891 DNAH12Q6ZR08 3092 aa8.11□□□□□ -1.11
CYLD-216ENST00000569891 CFAP70Q5T0N1 1121 aa8.11□□□□□ -1.11
CYLD-216ENST00000569891 BCANQ96GW7 911 aa8.11□□□□□ -1.11
CYLD-216ENST00000569891 TOPAZ1Q8N9V7 1692 aa8.1□□□□□ -1.11
CYLD-216ENST00000569891 PIK3C2GO75747 1445 aa8.1□□□□□ -1.11
CYLD-216ENST00000569891 MYO3AQ8NEV4 1616 aa8.1□□□□□ -1.11
CYLD-216ENST00000569891 ADGRF5Q8IZF2 1346 aa8.1□□□□□ -1.11
CYLD-216ENST00000569891 ZMYM3Q14202 1370 aa8.1□□□□□ -1.11
CYLD-216ENST00000569891 HNRNPUQ00839 825 aaKnown RBP eCLIP8.09□□□□□ -1.11
CYLD-216ENST00000569891 NLRP1Q9C000 1473 aa8.09□□□□□ -1.11
CYLD-216ENST00000569891 SPATA31D1Q6ZQQ2 1576 aa8.09□□□□□ -1.11
CYLD-216ENST00000569891 USP54Q70EL1 1684 aa8.09□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 15 ms