RNA–Protein interactions for RNA: ENST00000567355.1

PKD1-233, Transcript of polycystin 1, transient receptor potential channel interacting, humanhuman

TSL 4

Gene PKD1, Length 575 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKD1-233ENST00000567355 XIRP1Q702N8 1843 aaKnown RBP24.98■■□□□ 1.59
PKD1-233ENST00000567355 HDGFP51858 240 aaKnown RBP24.98■■□□□ 1.59
PKD1-233ENST00000567355 SLC26A8Q96RN1 970 aa24.98■■□□□ 1.59
PKD1-233ENST00000567355 NWD1Q149M9 1564 aa24.97■■□□□ 1.59
PKD1-233ENST00000567355 CLTCL1P53675 1640 aa24.95■■□□□ 1.58
PKD1-233ENST00000567355 TOM1O60784 492 aa24.95■■□□□ 1.58
PKD1-233ENST00000567355 CHGAP10645 457 aaKnown RBP24.95■■□□□ 1.58
PKD1-233ENST00000567355 KCNA6P17658 529 aa24.95■■□□□ 1.58
PKD1-233ENST00000567355 ABCF1Q8NE71 845 aaKnown RBP eCLIP24.95■■□□□ 1.58
PKD1-233ENST00000567355 TRIM52Q96A61 297 aa24.92■■□□□ 1.58
PKD1-233ENST00000567355 ADAMTS13Q76LX8 1427 aa24.92■■□□□ 1.58
PKD1-233ENST00000567355 CHD2O14647 1828 aaKnown RBP24.91■■□□□ 1.58
PKD1-233ENST00000567355 NKTRP30414 1462 aaKnown RBP24.9■■□□□ 1.58
PKD1-233ENST00000567355 PPP1R15AO75807 674 aaPredicted RBP24.9■■□□□ 1.58
PKD1-233ENST00000567355 TBX22Q9Y458 520 aa24.9■■□□□ 1.58
PKD1-233ENST00000567355 DIP2AQ14689 1571 aa24.89■■□□□ 1.58
PKD1-233ENST00000567355 SLC4A1APQ9BWU0 796 aaKnown RBP24.88■■□□□ 1.57
PKD1-233ENST00000567355 NUTM2DQ5VT03 806 aaPredicted RBP24.87■■□□□ 1.57
PKD1-233ENST00000567355 TMEM94Q12767 1356 aa24.86■■□□□ 1.57
PKD1-233ENST00000567355 BCANQ96GW7 911 aa24.86■■□□□ 1.57
PKD1-233ENST00000567355 NRXN3Q9Y4C0 1643 aa24.86■■□□□ 1.57
PKD1-233ENST00000567355 KIF1BO60333 1816 aa24.85■■□□□ 1.57
PKD1-233ENST00000567355 PIP4K2BP78356 416 aa24.85■■□□□ 1.57
PKD1-233ENST00000567355 NEXMIFQ5QGS0 1516 aa24.85■■□□□ 1.57
PKD1-233ENST00000567355 SETBP1Q9Y6X0 1596 aa24.84■■□□□ 1.57
PKD1-233ENST00000567355 PIK3R4Q99570 1358 aa24.83■■□□□ 1.57
PKD1-233ENST00000567355 SENP3Q9H4L4 574 aaPredicted RBP24.83■■□□□ 1.57
PKD1-233ENST00000567355 SETD5Q9C0A6 1442 aa24.8■■□□□ 1.56
PKD1-233ENST00000567355 HSPA1LP34931 641 aa24.8■■□□□ 1.56
PKD1-233ENST00000567355 PROSER2Q86WR7 435 aaPredicted RBP24.8■■□□□ 1.56
PKD1-233ENST00000567355 SCAF1Q9H7N4 1312 aaKnown RBP24.8■■□□□ 1.56
PKD1-233ENST00000567355 ZNF326Q5BKZ1 582 aaKnown RBP24.79■■□□□ 1.56
PKD1-233ENST00000567355 MPHOSPH9Q99550 1183 aa24.78■■□□□ 1.56
PKD1-233ENST00000567355 ACIN1Q9UKV3 1341 aaKnown RBP24.78■■□□□ 1.56
PKD1-233ENST00000567355 FOXD1Q16676 465 aa24.76■■□□□ 1.55
PKD1-233ENST00000567355 RBM33Q96EV2 1170 aaKnown RBP24.76■■□□□ 1.55
PKD1-233ENST00000567355 PTPRUQ92729 1446 aa24.76■■□□□ 1.55
PKD1-233ENST00000567355 NCOA3Q9Y6Q9 1424 aa24.76■■□□□ 1.55
PKD1-233ENST00000567355 XRN1Q8IZH2 1706 aaKnown RBP24.72■■□□□ 1.55
PKD1-233ENST00000567355 FAM135BQ49AJ0 1406 aa24.72■■□□□ 1.55
PKD1-233ENST00000567355 RAB3GAP2Q9H2M9 1393 aa24.71■■□□□ 1.55
PKD1-233ENST00000567355 RPGRIP1LQ68CZ1 1315 aa24.71■■□□□ 1.55
PKD1-233ENST00000567355 PPLO60437 1756 aa24.7■■□□□ 1.55
PKD1-233ENST00000567355 METP08581 1390 aa24.69■■□□□ 1.54
PKD1-233ENST00000567355 MSH6P52701 1360 aa24.69■■□□□ 1.54
PKD1-233ENST00000567355 AMOTL2Q9Y2J4 779 aa24.69■■□□□ 1.54
PKD1-233ENST00000567355 SETD1AO15047 1707 aaKnown RBP24.69■■□□□ 1.54
PKD1-233ENST00000567355 CCDC144AA2RUR9 1427 aa24.69■■□□□ 1.54
PKD1-233ENST00000567355 SPATA31E1Q6ZUB1 1445 aa24.69■■□□□ 1.54
PKD1-233ENST00000567355 DISP3Q9P2K9 1392 aa24.67■■□□□ 1.54
PKD1-233ENST00000567355 VGFO15240 615 aaPredicted RBP24.66■■□□□ 1.54
PKD1-233ENST00000567355 ROBO1Q9Y6N7 1651 aa24.65■■□□□ 1.54
PKD1-233ENST00000567355 SIPA1L2Q9P2F8 1722 aaPredicted RBP24.64■■□□□ 1.53
PKD1-233ENST00000567355 IFT172Q9UG01 1749 aa24.64■■□□□ 1.53
PKD1-233ENST00000567355 HRCP23327 699 aa24.61■■□□□ 1.53
PKD1-233ENST00000567355 SLAIN2Q9P270 581 aa24.61■■□□□ 1.53
PKD1-233ENST00000567355 C19orf44Q9H6X5 657 aa24.6■■□□□ 1.53
PKD1-233ENST00000567355 PRAG1Q86YV5 1406 aa24.6■■□□□ 1.53
PKD1-233ENST00000567355 MED1Q15648 1581 aaPredicted RBP24.59■■□□□ 1.53
PKD1-233ENST00000567355 DCCP43146 1447 aa24.56■■□□□ 1.52
PKD1-233ENST00000567355 ANKRD30BQ9BXX2 1392 aa24.55■■□□□ 1.52
PKD1-233ENST00000567355 PTCH1Q13635 1447 aa24.55■■□□□ 1.52
PKD1-233ENST00000567355 CADPS2Q86UW7 1296 aa24.55■■□□□ 1.52
PKD1-233ENST00000567355 ADGRF5Q8IZF2 1346 aa24.55■■□□□ 1.52
PKD1-233ENST00000567355 C14orf37Q86TY3 774 aa24.54■■□□□ 1.52
PKD1-233ENST00000567355 RGL3Q3MIN7 710 aa24.53■■□□□ 1.52
PKD1-233ENST00000567355 ILDR2Q71H61 639 aa24.52■■□□□ 1.52
PKD1-233ENST00000567355 ATF3P18847 181 aa24.51■■□□□ 1.51
PKD1-233ENST00000567355 NALCNQ8IZF0 1738 aa24.51■■□□□ 1.51
PKD1-233ENST00000567355 ADGRL3Q9HAR2 1447 aa24.51■■□□□ 1.51
PKD1-233ENST00000567355 ROBO2Q9HCK4 1378 aa24.5■■□□□ 1.51
PKD1-233ENST00000567355 PIK3C2GO75747 1445 aa24.5■■□□□ 1.51
PKD1-233ENST00000567355 NRXN1Q9ULB1 1477 aa24.49■■□□□ 1.51
PKD1-233ENST00000567355 PHLPP1O60346 1717 aa24.47■■□□□ 1.51
PKD1-233ENST00000567355 MST1RQ04912 1400 aa24.47■■□□□ 1.51
PKD1-233ENST00000567355 COL16A1Q07092 1604 aaPredicted RBP24.46■■□□□ 1.51
PKD1-233ENST00000567355 AHDC1Q5TGY3 1603 aaPredicted RBP24.46■■□□□ 1.51
PKD1-233ENST00000567355 ASXL1Q8IXJ9 1541 aa24.46■■□□□ 1.51
PKD1-233ENST00000567355 MYOM2P54296 1465 aa24.46■■□□□ 1.51
PKD1-233ENST00000567355 TECPR2O15040 1411 aa24.44■■□□□ 1.5
PKD1-233ENST00000567355 BRINP3Q76B58 766 aa24.42■■□□□ 1.5
PKD1-233ENST00000567355 KNDC1Q76NI1 1749 aa24.41■■□□□ 1.5
PKD1-233ENST00000567355 LRPPRCP42704 1394 aaKnown RBP24.41■■□□□ 1.5
PKD1-233ENST00000567355 ABCC11Q96J66 1382 aa24.39■■□□□ 1.49
PKD1-233ENST00000567355 LAMC1P11047 1609 aa24.39■■□□□ 1.49
PKD1-233ENST00000567355 C14orf93Q9H972 538 aaKnown RBP24.38■■□□□ 1.49
PKD1-233ENST00000567355 NHSL1Q5SYE7 1610 aa24.37■■□□□ 1.49
PKD1-233ENST00000567355 JCADQ9P266 1359 aa24.37■■□□□ 1.49
PKD1-233ENST00000567355 C1orf167Q5SNV9 1468 aa24.35■■□□□ 1.49
PKD1-233ENST00000567355 TMEM132EQ6IEE7 984 aa24.35■■□□□ 1.49
PKD1-233ENST00000567355 YTHDC2Q9H6S0 1430 aaKnown RBP24.35■■□□□ 1.49
PKD1-233ENST00000567355 CDC42BPGQ6DT37 1551 aa24.34■■□□□ 1.49
PKD1-233ENST00000567355 SHPRHQ149N8 1683 aa24.33■■□□□ 1.49
PKD1-233ENST00000567355 CFAP70Q5T0N1 1121 aa24.31■■□□□ 1.48
PKD1-233ENST00000567355 SIRT1Q96EB6 747 aa24.31■■□□□ 1.48
PKD1-233ENST00000567355 STK26Q9P289 416 aa24.31■■□□□ 1.48
PKD1-233ENST00000567355 DHX57Q6P158 1386 aaKnown RBP24.3■■□□□ 1.48
PKD1-233ENST00000567355 WAPLQ7Z5K2 1190 aa24.3■■□□□ 1.48
PKD1-233ENST00000567355 PHF23Q9BUL5 403 aaPredicted RBP24.3■■□□□ 1.48
PKD1-233ENST00000567355 RGS17Q9UGC6 210 aaPredicted RBP24.3■■□□□ 1.48
Retrieved 100 of 20,778 RNA–protein pairs in 41.1 ms