RNA–Protein interactions for RNA: ENST00000566482.5

CNEP1R1-208, Transcript of CTD nuclear envelope phosphatase 1 regulatory subunit 1, humanhuman

TSL 1 (best)

Gene CNEP1R1, Length 826 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNEP1R1-208ENST00000566482 FOXD1Q16676 465 aa19.17■□□□□ 0.66
CNEP1R1-208ENST00000566482 ILDR1Q86SU0 546 aaPredicted RBP19.16■□□□□ 0.66
CNEP1R1-208ENST00000566482 PHF23Q9BUL5 403 aaPredicted RBP19.16■□□□□ 0.66
CNEP1R1-208ENST00000566482 FBXO41Q8TF61 875 aa19.15■□□□□ 0.66
CNEP1R1-208ENST00000566482 PPP1R15AO75807 674 aaPredicted RBP19.13■□□□□ 0.65
CNEP1R1-208ENST00000566482 HDGFP51858 240 aaKnown RBP19.13■□□□□ 0.65
CNEP1R1-208ENST00000566482 ABCF1Q8NE71 845 aaKnown RBP eCLIP19.13■□□□□ 0.65
CNEP1R1-208ENST00000566482 CPS1P31327 1500 aa19.12■□□□□ 0.65
CNEP1R1-208ENST00000566482 PLEKHG1Q9ULL1 1385 aa19.12■□□□□ 0.65
CNEP1R1-208ENST00000566482 KIF1BO60333 1816 aa19.11■□□□□ 0.65
CNEP1R1-208ENST00000566482 IQSEC2Q5JU85 1478 aa19.11■□□□□ 0.65
CNEP1R1-208ENST00000566482 NUTM2DQ5VT03 806 aaPredicted RBP19.11■□□□□ 0.65
CNEP1R1-208ENST00000566482 ZNF326Q5BKZ1 582 aaKnown RBP19.1■□□□□ 0.65
CNEP1R1-208ENST00000566482 BCANQ96GW7 911 aa19.1■□□□□ 0.65
CNEP1R1-208ENST00000566482 SLC26A8Q96RN1 970 aa19.1■□□□□ 0.65
CNEP1R1-208ENST00000566482 STRCP1A6NGW2 1772 aa19.1■□□□□ 0.65
CNEP1R1-208ENST00000566482 HRCP23327 699 aa19.09■□□□□ 0.65
CNEP1R1-208ENST00000566482 CCDC144AA2RUR9 1427 aa19.07■□□□□ 0.64
CNEP1R1-208ENST00000566482 NEXMIFQ5QGS0 1516 aa19.06■□□□□ 0.64
CNEP1R1-208ENST00000566482 ADAMTS13Q76LX8 1427 aa19.03■□□□□ 0.64
CNEP1R1-208ENST00000566482 LRRC7Q96NW7 1537 aa19.03■□□□□ 0.64
CNEP1R1-208ENST00000566482 DIP2AQ14689 1571 aa19.02■□□□□ 0.64
CNEP1R1-208ENST00000566482 TBX22Q9Y458 520 aa19.02■□□□□ 0.64
CNEP1R1-208ENST00000566482 KCNA6P17658 529 aa19.01■□□□□ 0.63
CNEP1R1-208ENST00000566482 NWD1Q149M9 1564 aa19.01■□□□□ 0.63
CNEP1R1-208ENST00000566482 SETBP1Q9Y6X0 1596 aa19.01■□□□□ 0.63
CNEP1R1-208ENST00000566482 NRXN3Q9Y4C0 1643 aa19■□□□□ 0.63
CNEP1R1-208ENST00000566482 SPATA31E1Q6ZUB1 1445 aa19■□□□□ 0.63
CNEP1R1-208ENST00000566482 RPGRIP1LQ68CZ1 1315 aa19■□□□□ 0.63
CNEP1R1-208ENST00000566482 ANKRD30BQ9BXX2 1392 aa18.98■□□□□ 0.63
CNEP1R1-208ENST00000566482 PPLO60437 1756 aa18.98■□□□□ 0.63
CNEP1R1-208ENST00000566482 CHD2O14647 1828 aaKnown RBP18.97■□□□□ 0.63
CNEP1R1-208ENST00000566482 NKTRP30414 1462 aaKnown RBP18.97■□□□□ 0.63
CNEP1R1-208ENST00000566482 UBAP1LF5GYI3 381 aa18.97■□□□□ 0.63
CNEP1R1-208ENST00000566482 RGL3Q3MIN7 710 aa18.97■□□□□ 0.63
CNEP1R1-208ENST00000566482 VGFO15240 615 aaPredicted RBP18.96■□□□□ 0.63
CNEP1R1-208ENST00000566482 PIK3R4Q99570 1358 aa18.95■□□□□ 0.62
CNEP1R1-208ENST00000566482 XIRP1Q702N8 1843 aaKnown RBP18.95■□□□□ 0.62
CNEP1R1-208ENST00000566482 TRIM26Q12899 539 aaPredicted RBP18.94■□□□□ 0.62
CNEP1R1-208ENST00000566482 PROSER2Q86WR7 435 aaPredicted RBP18.94■□□□□ 0.62
CNEP1R1-208ENST00000566482 TMEM94Q12767 1356 aa18.93■□□□□ 0.62
CNEP1R1-208ENST00000566482 PTPRUQ92729 1446 aa18.93■□□□□ 0.62
CNEP1R1-208ENST00000566482 IFT172Q9UG01 1749 aa18.93■□□□□ 0.62
CNEP1R1-208ENST00000566482 TOM1O60784 492 aa18.91■□□□□ 0.62
CNEP1R1-208ENST00000566482 RBM33Q96EV2 1170 aaKnown RBP18.91■□□□□ 0.62
CNEP1R1-208ENST00000566482 METP08581 1390 aa18.91■□□□□ 0.62
CNEP1R1-208ENST00000566482 ALKQ9UM73 1620 aa18.9■□□□□ 0.62
CNEP1R1-208ENST00000566482 ADGRF5Q8IZF2 1346 aa18.9■□□□□ 0.62
CNEP1R1-208ENST00000566482 SETD1AO15047 1707 aaKnown RBP18.89■□□□□ 0.61
CNEP1R1-208ENST00000566482 AMOTL2Q9Y2J4 779 aa18.89■□□□□ 0.61
CNEP1R1-208ENST00000566482 XRN1Q8IZH2 1706 aaKnown RBP18.88■□□□□ 0.61
CNEP1R1-208ENST00000566482 PIP4K2BP78356 416 aa18.87■□□□□ 0.61
CNEP1R1-208ENST00000566482 SCAF1Q9H7N4 1312 aaKnown RBP18.86■□□□□ 0.61
CNEP1R1-208ENST00000566482 MYOM2P54296 1465 aa18.84■□□□□ 0.61
CNEP1R1-208ENST00000566482 PIK3C2GO75747 1445 aa18.83■□□□□ 0.61
CNEP1R1-208ENST00000566482 NCOA3Q9Y6Q9 1424 aa18.83■□□□□ 0.61
CNEP1R1-208ENST00000566482 MSH6P52701 1360 aa18.83■□□□□ 0.61
CNEP1R1-208ENST00000566482 NRXN1Q9ULB1 1477 aa18.82■□□□□ 0.6
CNEP1R1-208ENST00000566482 C14orf37Q86TY3 774 aa18.8■□□□□ 0.6
CNEP1R1-208ENST00000566482 ASXL1Q8IXJ9 1541 aa18.79■□□□□ 0.6
CNEP1R1-208ENST00000566482 DHX57Q6P158 1386 aaKnown RBP18.78■□□□□ 0.6
CNEP1R1-208ENST00000566482 PTCH1Q13635 1447 aa18.77■□□□□ 0.6
CNEP1R1-208ENST00000566482 PRAG1Q86YV5 1406 aa18.77■□□□□ 0.6
CNEP1R1-208ENST00000566482 DCAF11Q8TEB1 546 aa18.77■□□□□ 0.6
CNEP1R1-208ENST00000566482 KDM2AQ9Y2K7 1162 aa18.77■□□□□ 0.6
CNEP1R1-208ENST00000566482 ROBO2Q9HCK4 1378 aa18.77■□□□□ 0.6
CNEP1R1-208ENST00000566482 SIPA1L2Q9P2F8 1722 aaPredicted RBP18.77■□□□□ 0.59
CNEP1R1-208ENST00000566482 C14orf93Q9H972 538 aaKnown RBP18.76■□□□□ 0.59
CNEP1R1-208ENST00000566482 LAMC1P11047 1609 aa18.75■□□□□ 0.59
CNEP1R1-208ENST00000566482 TMEM132EQ6IEE7 984 aa18.75■□□□□ 0.59
CNEP1R1-208ENST00000566482 C19orf44Q9H6X5 657 aa18.75■□□□□ 0.59
CNEP1R1-208ENST00000566482 LRPPRCP42704 1394 aaKnown RBP18.74■□□□□ 0.59
CNEP1R1-208ENST00000566482 HSPA1LP34931 641 aa18.74■□□□□ 0.59
CNEP1R1-208ENST00000566482 CFAP70Q5T0N1 1121 aa18.74■□□□□ 0.59
CNEP1R1-208ENST00000566482 STAC3Q96MF2 364 aa18.73■□□□□ 0.59
CNEP1R1-208ENST00000566482 STK26Q9P289 416 aa18.73■□□□□ 0.59
CNEP1R1-208ENST00000566482 NALCNQ8IZF0 1738 aa18.73■□□□□ 0.59
CNEP1R1-208ENST00000566482 DCCP43146 1447 aa18.73■□□□□ 0.59
CNEP1R1-208ENST00000566482 FAM135BQ49AJ0 1406 aa18.73■□□□□ 0.59
CNEP1R1-208ENST00000566482 ADGRL3Q9HAR2 1447 aa18.73■□□□□ 0.59
CNEP1R1-208ENST00000566482 ATF3P18847 181 aa18.72■□□□□ 0.59
CNEP1R1-208ENST00000566482 CADPS2Q86UW7 1296 aa18.72■□□□□ 0.59
CNEP1R1-208ENST00000566482 SLAIN2Q9P270 581 aa18.72■□□□□ 0.59
CNEP1R1-208ENST00000566482 TECPR2O15040 1411 aa18.72■□□□□ 0.59
CNEP1R1-208ENST00000566482 YTHDC2Q9H6S0 1430 aaKnown RBP18.72■□□□□ 0.59
CNEP1R1-208ENST00000566482 ROBO1Q9Y6N7 1651 aa18.71■□□□□ 0.59
CNEP1R1-208ENST00000566482 SIN3AQ96ST3 1273 aa18.71■□□□□ 0.59
CNEP1R1-208ENST00000566482 KNDC1Q76NI1 1749 aa18.71■□□□□ 0.59
CNEP1R1-208ENST00000566482 ABCC11Q96J66 1382 aa18.7■□□□□ 0.58
CNEP1R1-208ENST00000566482 NEUROD1Q13562 356 aa18.67■□□□□ 0.58
CNEP1R1-208ENST00000566482 ADGRB1O14514 1584 aa18.67■□□□□ 0.58
CNEP1R1-208ENST00000566482 WAPLQ7Z5K2 1190 aa18.66■□□□□ 0.58
CNEP1R1-208ENST00000566482 MST1RQ04912 1400 aa18.66■□□□□ 0.58
CNEP1R1-208ENST00000566482 PLEKHH1Q9ULM0 1364 aa18.65■□□□□ 0.58
CNEP1R1-208ENST00000566482 L3MBTL2Q969R5 705 aa18.64■□□□□ 0.57
CNEP1R1-208ENST00000566482 PCGF6Q9BYE7 350 aa18.64■□□□□ 0.57
CNEP1R1-208ENST00000566482 SIRT1Q96EB6 747 aa18.62■□□□□ 0.57
CNEP1R1-208ENST00000566482 DLC1Q96QB1 1528 aa18.62■□□□□ 0.57
CNEP1R1-208ENST00000566482 CDC42BPGQ6DT37 1551 aa18.61■□□□□ 0.57
CNEP1R1-208ENST00000566482 BRINP3Q76B58 766 aa18.61■□□□□ 0.57
Retrieved 100 of 20,778 RNA–protein pairs in 18.4 ms