RNA–Protein interactions for RNA: ENST00000566243.5

EDC3-211, Transcript of enhancer of mRNA decapping 3, humanhuman

TSL 3

Gene EDC3, Length 711 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EDC3-211ENST00000566243 IQSEC2Q5JU85 1478 aa28.4■■■□□ 2.14
EDC3-211ENST00000566243 CLTCL1P53675 1640 aa28.4■■■□□ 2.14
EDC3-211ENST00000566243 HDGFP51858 240 aaKnown RBP28.4■■■□□ 2.14
EDC3-211ENST00000566243 SLC26A8Q96RN1 970 aa28.4■■■□□ 2.14
EDC3-211ENST00000566243 SENP3Q9H4L4 574 aaPredicted RBP28.4■■■□□ 2.14
EDC3-211ENST00000566243 MYO5BQ9ULV0 1848 aa28.4■■■□□ 2.14
EDC3-211ENST00000566243 CPS1P31327 1500 aa28.39■■■□□ 2.14
EDC3-211ENST00000566243 PPP1R15AO75807 674 aaPredicted RBP28.39■■■□□ 2.14
EDC3-211ENST00000566243 PLEKHG1Q9ULL1 1385 aa28.38■■■□□ 2.13
EDC3-211ENST00000566243 ABCF1Q8NE71 845 aaKnown RBP eCLIP28.38■■■□□ 2.13
EDC3-211ENST00000566243 ACIN1Q9UKV3 1341 aaKnown RBP28.37■■■□□ 2.13
EDC3-211ENST00000566243 BCANQ96GW7 911 aa28.36■■■□□ 2.13
EDC3-211ENST00000566243 ZNF326Q5BKZ1 582 aaKnown RBP28.34■■■□□ 2.13
EDC3-211ENST00000566243 STRCP1A6NGW2 1772 aa28.3■■■□□ 2.12
EDC3-211ENST00000566243 LRRC7Q96NW7 1537 aa28.29■■■□□ 2.12
EDC3-211ENST00000566243 HRCP23327 699 aa28.28■■■□□ 2.12
EDC3-211ENST00000566243 ADAMTS13Q76LX8 1427 aa28.27■■■□□ 2.12
EDC3-211ENST00000566243 KCNA6P17658 529 aa28.27■■■□□ 2.12
EDC3-211ENST00000566243 TBX22Q9Y458 520 aa28.26■■■□□ 2.11
EDC3-211ENST00000566243 CCDC144AA2RUR9 1427 aa28.26■■■□□ 2.11
EDC3-211ENST00000566243 UBAP1LF5GYI3 381 aa28.25■■■□□ 2.11
EDC3-211ENST00000566243 NEXMIFQ5QGS0 1516 aa28.24■■■□□ 2.11
EDC3-211ENST00000566243 KIF1BO60333 1816 aa28.18■■■□□ 2.1
EDC3-211ENST00000566243 SPATA31E1Q6ZUB1 1445 aa28.18■■■□□ 2.1
EDC3-211ENST00000566243 RPGRIP1LQ68CZ1 1315 aa28.18■■■□□ 2.1
EDC3-211ENST00000566243 NWD1Q149M9 1564 aa28.17■■■□□ 2.1
EDC3-211ENST00000566243 DIP2AQ14689 1571 aa28.16■■■□□ 2.1
EDC3-211ENST00000566243 SETBP1Q9Y6X0 1596 aa28.16■■■□□ 2.1
EDC3-211ENST00000566243 TMEM94Q12767 1356 aa28.15■■■□□ 2.1
EDC3-211ENST00000566243 RBM33Q96EV2 1170 aaKnown RBP28.15■■■□□ 2.1
EDC3-211ENST00000566243 NRXN3Q9Y4C0 1643 aa28.14■■■□□ 2.1
EDC3-211ENST00000566243 RGL3Q3MIN7 710 aa28.14■■■□□ 2.1
EDC3-211ENST00000566243 PROSER2Q86WR7 435 aaPredicted RBP28.14■■■□□ 2.1
EDC3-211ENST00000566243 NKTRP30414 1462 aaKnown RBP28.14■■■□□ 2.09
EDC3-211ENST00000566243 PIK3R4Q99570 1358 aa28.13■■■□□ 2.09
EDC3-211ENST00000566243 VGFO15240 615 aaPredicted RBP28.13■■■□□ 2.09
EDC3-211ENST00000566243 TOM1O60784 492 aa28.13■■■□□ 2.09
EDC3-211ENST00000566243 ANKRD30BQ9BXX2 1392 aa28.12■■■□□ 2.09
EDC3-211ENST00000566243 PTPRUQ92729 1446 aa28.11■■■□□ 2.09
EDC3-211ENST00000566243 ALKQ9UM73 1620 aa28.1■■■□□ 2.09
EDC3-211ENST00000566243 METP08581 1390 aa28.1■■■□□ 2.09
EDC3-211ENST00000566243 PIP4K2BP78356 416 aa28.08■■■□□ 2.09
EDC3-211ENST00000566243 AMOTL2Q9Y2J4 779 aa28.08■■■□□ 2.09
EDC3-211ENST00000566243 CHD2O14647 1828 aaKnown RBP28.06■■■□□ 2.08
EDC3-211ENST00000566243 ADGRF5Q8IZF2 1346 aa28.06■■■□□ 2.08
EDC3-211ENST00000566243 SCAF1Q9H7N4 1312 aaKnown RBP28.05■■■□□ 2.08
EDC3-211ENST00000566243 XIRP1Q702N8 1843 aaKnown RBP28.04■■■□□ 2.08
EDC3-211ENST00000566243 PPLO60437 1756 aa28.02■■■□□ 2.08
EDC3-211ENST00000566243 XRN1Q8IZH2 1706 aaKnown RBP27.96■■■□□ 2.07
EDC3-211ENST00000566243 NCOA3Q9Y6Q9 1424 aa27.96■■■□□ 2.07
EDC3-211ENST00000566243 TRIM26Q12899 539 aaPredicted RBP27.96■■■□□ 2.07
EDC3-211ENST00000566243 MSH6P52701 1360 aa27.96■■■□□ 2.07
EDC3-211ENST00000566243 IFT172Q9UG01 1749 aa27.94■■■□□ 2.06
EDC3-211ENST00000566243 PIK3C2GO75747 1445 aa27.93■■■□□ 2.06
EDC3-211ENST00000566243 SETD1AO15047 1707 aaKnown RBP27.93■■■□□ 2.06
EDC3-211ENST00000566243 HSPA1LP34931 641 aa27.93■■■□□ 2.06
EDC3-211ENST00000566243 C14orf37Q86TY3 774 aa27.92■■■□□ 2.06
EDC3-211ENST00000566243 MYOM2P54296 1465 aa27.89■■■□□ 2.06
EDC3-211ENST00000566243 NRXN1Q9ULB1 1477 aa27.89■■■□□ 2.06
EDC3-211ENST00000566243 C19orf44Q9H6X5 657 aa27.88■■■□□ 2.05
EDC3-211ENST00000566243 ROBO2Q9HCK4 1378 aa27.87■■■□□ 2.05
EDC3-211ENST00000566243 PTCH1Q13635 1447 aa27.86■■■□□ 2.05
EDC3-211ENST00000566243 FAM135BQ49AJ0 1406 aa27.86■■■□□ 2.05
EDC3-211ENST00000566243 PRAG1Q86YV5 1406 aa27.85■■■□□ 2.05
EDC3-211ENST00000566243 SLAIN2Q9P270 581 aa27.85■■■□□ 2.05
EDC3-211ENST00000566243 DHX57Q6P158 1386 aaKnown RBP27.85■■■□□ 2.05
EDC3-211ENST00000566243 ASXL1Q8IXJ9 1541 aa27.84■■■□□ 2.05
EDC3-211ENST00000566243 TMEM132EQ6IEE7 984 aa27.84■■■□□ 2.05
EDC3-211ENST00000566243 DCAF11Q8TEB1 546 aa27.84■■■□□ 2.05
EDC3-211ENST00000566243 C14orf93Q9H972 538 aaKnown RBP27.84■■■□□ 2.05
EDC3-211ENST00000566243 CFAP70Q5T0N1 1121 aa27.83■■■□□ 2.05
EDC3-211ENST00000566243 CADPS2Q86UW7 1296 aa27.82■■■□□ 2.04
EDC3-211ENST00000566243 KDM2AQ9Y2K7 1162 aa27.82■■■□□ 2.04
EDC3-211ENST00000566243 ATF3P18847 181 aa27.81■■■□□ 2.04
EDC3-211ENST00000566243 STK26Q9P289 416 aa27.81■■■□□ 2.04
EDC3-211ENST00000566243 LRPPRCP42704 1394 aaKnown RBP27.8■■■□□ 2.04
EDC3-211ENST00000566243 SIPA1L2Q9P2F8 1722 aaPredicted RBP27.79■■■□□ 2.04
EDC3-211ENST00000566243 ADGRL3Q9HAR2 1447 aa27.79■■■□□ 2.04
EDC3-211ENST00000566243 DCCP43146 1447 aa27.77■■■□□ 2.04
EDC3-211ENST00000566243 TECPR2O15040 1411 aa27.76■■■□□ 2.04
EDC3-211ENST00000566243 ABCC11Q96J66 1382 aa27.76■■■□□ 2.03
EDC3-211ENST00000566243 YTHDC2Q9H6S0 1430 aaKnown RBP27.75■■■□□ 2.03
EDC3-211ENST00000566243 ROBO1Q9Y6N7 1651 aa27.75■■■□□ 2.03
EDC3-211ENST00000566243 STAC3Q96MF2 364 aa27.74■■■□□ 2.03
EDC3-211ENST00000566243 SIN3AQ96ST3 1273 aa27.73■■■□□ 2.03
EDC3-211ENST00000566243 WAPLQ7Z5K2 1190 aa27.72■■■□□ 2.03
EDC3-211ENST00000566243 MST1RQ04912 1400 aa27.71■■■□□ 2.03
EDC3-211ENST00000566243 PLEKHH1Q9ULM0 1364 aa27.71■■■□□ 2.03
EDC3-211ENST00000566243 NALCNQ8IZF0 1738 aa27.7■■■□□ 2.03
EDC3-211ENST00000566243 LAMC1P11047 1609 aa27.69■■■□□ 2.02
EDC3-211ENST00000566243 ADGRB1O14514 1584 aa27.68■■■□□ 2.02
EDC3-211ENST00000566243 BRINP3Q76B58 766 aa27.67■■■□□ 2.02
EDC3-211ENST00000566243 SIRT1Q96EB6 747 aa27.66■■■□□ 2.02
EDC3-211ENST00000566243 KNDC1Q76NI1 1749 aa27.64■■■□□ 2.02
EDC3-211ENST00000566243 NEUROD1Q13562 356 aa27.64■■■□□ 2.02
EDC3-211ENST00000566243 L3MBTL2Q969R5 705 aa27.63■■■□□ 2.01
EDC3-211ENST00000566243 C1orf167Q5SNV9 1468 aa27.61■■■□□ 2.01
EDC3-211ENST00000566243 PRAM1Q96QH2 718 aa27.6■■■□□ 2.01
EDC3-211ENST00000566243 TRAK1Q9UPV9 953 aa27.59■■■□□ 2.01
EDC3-211ENST00000566243 DISP3Q9P2K9 1392 aa27.59■■■□□ 2.01
Retrieved 100 of 20,778 RNA–protein pairs in 11.1 ms