RNA–Protein interactions for RNA: ENST00000565345.5

SCAMP2-206, Transcript of secretory carrier membrane protein 2, humanhuman

TSL 5

Gene SCAMP2, Length 790 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAMP2-206ENST00000565345 SPHKAPQ2M3C7 1700 aa28.74■■■□□ 2.19
SCAMP2-206ENST00000565345 ABCF1Q8NE71 845 aaKnown RBP eCLIP28.72■■■□□ 2.19
SCAMP2-206ENST00000565345 KCNA6P17658 529 aa28.71■■■□□ 2.19
SCAMP2-206ENST00000565345 SLC26A8Q96RN1 970 aa28.71■■■□□ 2.19
SCAMP2-206ENST00000565345 XIRP1Q702N8 1843 aaKnown RBP28.7■■■□□ 2.18
SCAMP2-206ENST00000565345 NWD1Q149M9 1564 aa28.69■■■□□ 2.18
SCAMP2-206ENST00000565345 CHGAP10645 457 aaKnown RBP28.68■■■□□ 2.18
SCAMP2-206ENST00000565345 PPP1R15AO75807 674 aaPredicted RBP28.66■■■□□ 2.18
SCAMP2-206ENST00000565345 PIP4K2BP78356 416 aa28.66■■■□□ 2.18
SCAMP2-206ENST00000565345 NKTRP30414 1462 aaKnown RBP28.66■■■□□ 2.18
SCAMP2-206ENST00000565345 TRPM2O94759 1503 aa28.64■■■□□ 2.17
SCAMP2-206ENST00000565345 BCANQ96GW7 911 aa28.63■■■□□ 2.17
SCAMP2-206ENST00000565345 TBX22Q9Y458 520 aa28.63■■■□□ 2.17
SCAMP2-206ENST00000565345 SCAF1Q9H7N4 1312 aaKnown RBP28.63■■■□□ 2.17
SCAMP2-206ENST00000565345 CHD2O14647 1828 aaKnown RBP28.62■■■□□ 2.17
SCAMP2-206ENST00000565345 DIP2AQ14689 1571 aa28.61■■■□□ 2.17
SCAMP2-206ENST00000565345 TMEM94Q12767 1356 aa28.6■■■□□ 2.17
SCAMP2-206ENST00000565345 ADAMTS13Q76LX8 1427 aa28.6■■■□□ 2.17
SCAMP2-206ENST00000565345 HSPA1LP34931 641 aa28.59■■■□□ 2.17
SCAMP2-206ENST00000565345 CLTCL1P53675 1640 aa28.58■■■□□ 2.17
SCAMP2-206ENST00000565345 PROSER2Q86WR7 435 aaPredicted RBP28.57■■■□□ 2.16
SCAMP2-206ENST00000565345 TRIM52Q96A61 297 aa28.57■■■□□ 2.16
SCAMP2-206ENST00000565345 PIK3R4Q99570 1358 aa28.57■■■□□ 2.16
SCAMP2-206ENST00000565345 DISP3Q9P2K9 1392 aa28.55■■■□□ 2.16
SCAMP2-206ENST00000565345 NUTM2DQ5VT03 806 aaPredicted RBP28.54■■■□□ 2.16
SCAMP2-206ENST00000565345 SLC4A1APQ9BWU0 796 aaKnown RBP28.52■■■□□ 2.16
SCAMP2-206ENST00000565345 KIF1BO60333 1816 aa28.52■■■□□ 2.16
SCAMP2-206ENST00000565345 SETBP1Q9Y6X0 1596 aa28.5■■■□□ 2.15
SCAMP2-206ENST00000565345 SENP3Q9H4L4 574 aaPredicted RBP28.5■■■□□ 2.15
SCAMP2-206ENST00000565345 NCOA3Q9Y6Q9 1424 aa28.5■■■□□ 2.15
SCAMP2-206ENST00000565345 NEXMIFQ5QGS0 1516 aa28.48■■■□□ 2.15
SCAMP2-206ENST00000565345 NRXN3Q9Y4C0 1643 aa28.48■■■□□ 2.15
SCAMP2-206ENST00000565345 ZNF326Q5BKZ1 582 aaKnown RBP28.48■■■□□ 2.15
SCAMP2-206ENST00000565345 FAM135BQ49AJ0 1406 aa28.48■■■□□ 2.15
SCAMP2-206ENST00000565345 ACIN1Q9UKV3 1341 aaKnown RBP28.46■■■□□ 2.15
SCAMP2-206ENST00000565345 MSH6P52701 1360 aa28.45■■■□□ 2.14
SCAMP2-206ENST00000565345 RBM33Q96EV2 1170 aaKnown RBP28.44■■■□□ 2.14
SCAMP2-206ENST00000565345 PTPRUQ92729 1446 aa28.41■■■□□ 2.14
SCAMP2-206ENST00000565345 AMOTL2Q9Y2J4 779 aa28.38■■■□□ 2.13
SCAMP2-206ENST00000565345 RPGRIP1LQ68CZ1 1315 aa28.38■■■□□ 2.13
SCAMP2-206ENST00000565345 XRN1Q8IZH2 1706 aaKnown RBP28.38■■■□□ 2.13
SCAMP2-206ENST00000565345 MPHOSPH9Q99550 1183 aa28.37■■■□□ 2.13
SCAMP2-206ENST00000565345 MED1Q15648 1581 aaPredicted RBP28.37■■■□□ 2.13
SCAMP2-206ENST00000565345 SETD5Q9C0A6 1442 aa28.36■■■□□ 2.13
SCAMP2-206ENST00000565345 ROBO1Q9Y6N7 1651 aa28.36■■■□□ 2.13
SCAMP2-206ENST00000565345 VGFO15240 615 aaPredicted RBP28.34■■■□□ 2.13
SCAMP2-206ENST00000565345 ILDR2Q71H61 639 aa28.33■■■□□ 2.13
SCAMP2-206ENST00000565345 SLAIN2Q9P270 581 aa28.33■■■□□ 2.13
SCAMP2-206ENST00000565345 METP08581 1390 aa28.33■■■□□ 2.13
SCAMP2-206ENST00000565345 FOXD1Q16676 465 aa28.32■■■□□ 2.12
SCAMP2-206ENST00000565345 C19orf44Q9H6X5 657 aa28.32■■■□□ 2.12
SCAMP2-206ENST00000565345 CCDC144AA2RUR9 1427 aa28.32■■■□□ 2.12
SCAMP2-206ENST00000565345 PPLO60437 1756 aa28.32■■■□□ 2.12
SCAMP2-206ENST00000565345 SIPA1L2Q9P2F8 1722 aaPredicted RBP28.31■■■□□ 2.12
SCAMP2-206ENST00000565345 CADPS2Q86UW7 1296 aa28.28■■■□□ 2.12
SCAMP2-206ENST00000565345 SETD1AO15047 1707 aaKnown RBP28.28■■■□□ 2.12
SCAMP2-206ENST00000565345 C14orf37Q86TY3 774 aa28.27■■■□□ 2.12
SCAMP2-206ENST00000565345 DCCP43146 1447 aa28.26■■■□□ 2.12
SCAMP2-206ENST00000565345 SPATA31E1Q6ZUB1 1445 aa28.26■■■□□ 2.11
SCAMP2-206ENST00000565345 RAB3GAP2Q9H2M9 1393 aa28.24■■■□□ 2.11
SCAMP2-206ENST00000565345 ATF3P18847 181 aa28.23■■■□□ 2.11
SCAMP2-206ENST00000565345 PRAG1Q86YV5 1406 aa28.22■■■□□ 2.11
SCAMP2-206ENST00000565345 IFT172Q9UG01 1749 aa28.21■■■□□ 2.11
SCAMP2-206ENST00000565345 PTCH1Q13635 1447 aa28.19■■■□□ 2.1
SCAMP2-206ENST00000565345 PHLPP1O60346 1717 aa28.18■■■□□ 2.1
SCAMP2-206ENST00000565345 ANKRD30BQ9BXX2 1392 aa28.18■■■□□ 2.1
SCAMP2-206ENST00000565345 ADGRL3Q9HAR2 1447 aa28.17■■■□□ 2.1
SCAMP2-206ENST00000565345 HRCP23327 699 aa28.16■■■□□ 2.1
SCAMP2-206ENST00000565345 SOCS7O14512 581 aa28.15■■■□□ 2.1
SCAMP2-206ENST00000565345 ADGRF5Q8IZF2 1346 aa28.14■■■□□ 2.09
SCAMP2-206ENST00000565345 COL16A1Q07092 1604 aaPredicted RBP28.14■■■□□ 2.09
SCAMP2-206ENST00000565345 AHDC1Q5TGY3 1603 aaPredicted RBP28.14■■■□□ 2.09
SCAMP2-206ENST00000565345 RGL3Q3MIN7 710 aa28.13■■■□□ 2.09
SCAMP2-206ENST00000565345 NALCNQ8IZF0 1738 aa28.12■■■□□ 2.09
SCAMP2-206ENST00000565345 MST1RQ04912 1400 aa28.12■■■□□ 2.09
SCAMP2-206ENST00000565345 PHF23Q9BUL5 403 aaPredicted RBP28.11■■■□□ 2.09
SCAMP2-206ENST00000565345 ROBO2Q9HCK4 1378 aa28.11■■■□□ 2.09
SCAMP2-206ENST00000565345 JCADQ9P266 1359 aa28.1■■■□□ 2.09
SCAMP2-206ENST00000565345 BRINP3Q76B58 766 aa28.09■■■□□ 2.09
SCAMP2-206ENST00000565345 PIK3C2GO75747 1445 aa28.08■■■□□ 2.09
SCAMP2-206ENST00000565345 ASXL1Q8IXJ9 1541 aa28.05■■■□□ 2.08
SCAMP2-206ENST00000565345 MYOM2P54296 1465 aa28.03■■■□□ 2.08
SCAMP2-206ENST00000565345 NRXN1Q9ULB1 1477 aa28.03■■■□□ 2.08
SCAMP2-206ENST00000565345 TECPR2O15040 1411 aa28.03■■■□□ 2.08
SCAMP2-206ENST00000565345 NHSL1Q5SYE7 1610 aa28.02■■■□□ 2.08
SCAMP2-206ENST00000565345 LRPPRCP42704 1394 aaKnown RBP28■■■□□ 2.07
SCAMP2-206ENST00000565345 KNDC1Q76NI1 1749 aa28■■■□□ 2.07
SCAMP2-206ENST00000565345 SHPRHQ149N8 1683 aa28■■■□□ 2.07
SCAMP2-206ENST00000565345 ABCC11Q96J66 1382 aa27.99■■■□□ 2.07
SCAMP2-206ENST00000565345 RGS17Q9UGC6 210 aaPredicted RBP27.99■■■□□ 2.07
SCAMP2-206ENST00000565345 SPATA31A6Q5VVP1 1343 aa27.98■■■□□ 2.07
SCAMP2-206ENST00000565345 C1orf167Q5SNV9 1468 aa27.98■■■□□ 2.07
SCAMP2-206ENST00000565345 LAMC1P11047 1609 aa27.97■■■□□ 2.07
SCAMP2-206ENST00000565345 C14orf93Q9H972 538 aaKnown RBP27.97■■■□□ 2.07
SCAMP2-206ENST00000565345 CDC42BPGQ6DT37 1551 aa27.95■■■□□ 2.07
SCAMP2-206ENST00000565345 YTHDC2Q9H6S0 1430 aaKnown RBP27.93■■■□□ 2.06
SCAMP2-206ENST00000565345 TMEM132EQ6IEE7 984 aa27.93■■■□□ 2.06
SCAMP2-206ENST00000565345 SIRT1Q96EB6 747 aa27.92■■■□□ 2.06
SCAMP2-206ENST00000565345 STK26Q9P289 416 aa27.9■■■□□ 2.06
SCAMP2-206ENST00000565345 LRRC59Q96AG4 307 aaKnown RBP27.89■■■□□ 2.06
Retrieved 100 of 20,778 RNA–protein pairs in 28.3 ms