RNA–Protein interactions for RNA: ENST00000565151.1

USB1-210, Transcript of U6 snRNA biogenesis phosphodiesterase 1, humanhuman

TSL 2

Gene USB1, Length 886 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USB1-210ENST00000565151 SENP3Q9H4L4 574 aaPredicted RBP22.45■■□□□ 1.18
USB1-210ENST00000565151 RIMS2Q9UQ26 1411 aa22.44■■□□□ 1.18
USB1-210ENST00000565151 NWD1Q149M9 1564 aa22.43■■□□□ 1.18
USB1-210ENST00000565151 TOM1O60784 492 aa22.43■■□□□ 1.18
USB1-210ENST00000565151 HSPA1LP34931 641 aa22.42■■□□□ 1.18
USB1-210ENST00000565151 PLEKHG1Q9ULL1 1385 aa22.39■■□□□ 1.18
USB1-210ENST00000565151 CLTCL1P53675 1640 aa22.39■■□□□ 1.18
USB1-210ENST00000565151 SCAF1Q9H7N4 1312 aaKnown RBP22.39■■□□□ 1.18
USB1-210ENST00000565151 NUTM2DQ5VT03 806 aaPredicted RBP22.38■■□□□ 1.17
USB1-210ENST00000565151 RBM33Q96EV2 1170 aaKnown RBP22.38■■□□□ 1.17
USB1-210ENST00000565151 DISP3Q9P2K9 1392 aa22.38■■□□□ 1.17
USB1-210ENST00000565151 CHGAP10645 457 aaKnown RBP22.37■■□□□ 1.17
USB1-210ENST00000565151 KCNA6P17658 529 aa22.37■■□□□ 1.17
USB1-210ENST00000565151 ILDR2Q71H61 639 aa22.37■■□□□ 1.17
USB1-210ENST00000565151 HFM1A2PYH4 1435 aa22.37■■□□□ 1.17
USB1-210ENST00000565151 ADAMTS13Q76LX8 1427 aa22.36■■□□□ 1.17
USB1-210ENST00000565151 NRXN3Q9Y4C0 1643 aa22.35■■□□□ 1.17
USB1-210ENST00000565151 TMEM94Q12767 1356 aa22.35■■□□□ 1.17
USB1-210ENST00000565151 KIF1BO60333 1816 aa22.32■■□□□ 1.16
USB1-210ENST00000565151 TRPM2O94759 1503 aa22.31■■□□□ 1.16
USB1-210ENST00000565151 NKTRP30414 1462 aaKnown RBP22.31■■□□□ 1.16
USB1-210ENST00000565151 BCANQ96GW7 911 aa22.29■■□□□ 1.16
USB1-210ENST00000565151 TBX22Q9Y458 520 aa22.29■■□□□ 1.16
USB1-210ENST00000565151 PPP1R15AO75807 674 aaPredicted RBP22.28■■□□□ 1.16
USB1-210ENST00000565151 PROSER2Q86WR7 435 aaPredicted RBP22.28■■□□□ 1.16
USB1-210ENST00000565151 MED1Q15648 1581 aaPredicted RBP22.28■■□□□ 1.16
USB1-210ENST00000565151 NEXMIFQ5QGS0 1516 aa22.27■■□□□ 1.16
USB1-210ENST00000565151 DIP2AQ14689 1571 aa22.27■■□□□ 1.16
USB1-210ENST00000565151 PTPRUQ92729 1446 aa22.27■■□□□ 1.16
USB1-210ENST00000565151 ABCF1Q8NE71 845 aaKnown RBP eCLIP22.26■■□□□ 1.15
USB1-210ENST00000565151 ROBO1Q9Y6N7 1651 aa22.26■■□□□ 1.15
USB1-210ENST00000565151 SETBP1Q9Y6X0 1596 aa22.25■■□□□ 1.15
USB1-210ENST00000565151 HDGFP51858 240 aaKnown RBP22.24■■□□□ 1.15
USB1-210ENST00000565151 TRIM52Q96A61 297 aa22.23■■□□□ 1.15
USB1-210ENST00000565151 XRN1Q8IZH2 1706 aaKnown RBP22.23■■□□□ 1.15
USB1-210ENST00000565151 SETD1AO15047 1707 aaKnown RBP22.22■■□□□ 1.15
USB1-210ENST00000565151 SIPA1L2Q9P2F8 1722 aaPredicted RBP22.22■■□□□ 1.15
USB1-210ENST00000565151 FAM135BQ49AJ0 1406 aa22.21■■□□□ 1.15
USB1-210ENST00000565151 PPLO60437 1756 aa22.2■■□□□ 1.14
USB1-210ENST00000565151 FOXD1Q16676 465 aa22.19■■□□□ 1.14
USB1-210ENST00000565151 PIK3R4Q99570 1358 aa22.18■■□□□ 1.14
USB1-210ENST00000565151 SLC4A1APQ9BWU0 796 aaKnown RBP22.17■■□□□ 1.14
USB1-210ENST00000565151 METP08581 1390 aa22.16■■□□□ 1.14
USB1-210ENST00000565151 ZNF326Q5BKZ1 582 aaKnown RBP22.16■■□□□ 1.14
USB1-210ENST00000565151 MSH6P52701 1360 aa22.14■■□□□ 1.14
USB1-210ENST00000565151 AMOTL2Q9Y2J4 779 aa22.14■■□□□ 1.13
USB1-210ENST00000565151 NCOA3Q9Y6Q9 1424 aa22.12■■□□□ 1.13
USB1-210ENST00000565151 PHLPP1O60346 1717 aa22.11■■□□□ 1.13
USB1-210ENST00000565151 IFT172Q9UG01 1749 aa22.11■■□□□ 1.13
USB1-210ENST00000565151 SLAIN2Q9P270 581 aa22.11■■□□□ 1.13
USB1-210ENST00000565151 MPHOSPH9Q99550 1183 aa22.09■■□□□ 1.13
USB1-210ENST00000565151 NALCNQ8IZF0 1738 aa22.09■■□□□ 1.13
USB1-210ENST00000565151 COL16A1Q07092 1604 aaPredicted RBP22.07■■□□□ 1.12
USB1-210ENST00000565151 SOCS7O14512 581 aa22.05■■□□□ 1.12
USB1-210ENST00000565151 SPATA31E1Q6ZUB1 1445 aa22.05■■□□□ 1.12
USB1-210ENST00000565151 C19orf44Q9H6X5 657 aa22.04■■□□□ 1.12
USB1-210ENST00000565151 SETD5Q9C0A6 1442 aa22.04■■□□□ 1.12
USB1-210ENST00000565151 RGS17Q9UGC6 210 aaPredicted RBP22.02■■□□□ 1.12
USB1-210ENST00000565151 C14orf37Q86TY3 774 aa22.01■■□□□ 1.11
USB1-210ENST00000565151 AHDC1Q5TGY3 1603 aaPredicted RBP22■■□□□ 1.11
USB1-210ENST00000565151 RPGRIP1LQ68CZ1 1315 aa22■■□□□ 1.11
USB1-210ENST00000565151 RAB3GAP2Q9H2M9 1393 aa21.99■■□□□ 1.11
USB1-210ENST00000565151 VGFO15240 615 aaPredicted RBP21.99■■□□□ 1.11
USB1-210ENST00000565151 ADGRF5Q8IZF2 1346 aa21.99■■□□□ 1.11
USB1-210ENST00000565151 CCDC144AA2RUR9 1427 aa21.98■■□□□ 1.11
USB1-210ENST00000565151 CADPS2Q86UW7 1296 aa21.98■■□□□ 1.11
USB1-210ENST00000565151 ROBO2Q9HCK4 1378 aa21.98■■□□□ 1.11
USB1-210ENST00000565151 MST1RQ04912 1400 aa21.97■■□□□ 1.11
USB1-210ENST00000565151 ATF3P18847 181 aa21.97■■□□□ 1.11
USB1-210ENST00000565151 DCCP43146 1447 aa21.97■■□□□ 1.11
USB1-210ENST00000565151 NHSL1Q5SYE7 1610 aa21.96■■□□□ 1.11
USB1-210ENST00000565151 RGL3Q3MIN7 710 aa21.96■■□□□ 1.11
USB1-210ENST00000565151 PRAG1Q86YV5 1406 aa21.96■■□□□ 1.11
USB1-210ENST00000565151 ADGRL3Q9HAR2 1447 aa21.96■■□□□ 1.11
USB1-210ENST00000565151 ASXL1Q8IXJ9 1541 aa21.96■■□□□ 1.11
USB1-210ENST00000565151 BRINP3Q76B58 766 aa21.95■■□□□ 1.1
USB1-210ENST00000565151 PTCH1Q13635 1447 aa21.94■■□□□ 1.1
USB1-210ENST00000565151 SHPRHQ149N8 1683 aa21.93■■□□□ 1.1
USB1-210ENST00000565151 PHF23Q9BUL5 403 aaPredicted RBP21.92■■□□□ 1.1
USB1-210ENST00000565151 LRP6O75581 1613 aa21.91■■□□□ 1.1
USB1-210ENST00000565151 JCADQ9P266 1359 aa21.9■■□□□ 1.1
USB1-210ENST00000565151 KNDC1Q76NI1 1749 aa21.89■■□□□ 1.09
USB1-210ENST00000565151 PIK3C2GO75747 1445 aa21.89■■□□□ 1.09
USB1-210ENST00000565151 DDX17Q92841 729 aaKnown RBP21.88■■□□□ 1.09
USB1-210ENST00000565151 LAMC1P11047 1609 aa21.87■■□□□ 1.09
USB1-210ENST00000565151 ANKRD30BQ9BXX2 1392 aa21.87■■□□□ 1.09
USB1-210ENST00000565151 POTEAQ6S8J7 498 aa21.86■■□□□ 1.09
USB1-210ENST00000565151 C1orf167Q5SNV9 1468 aa21.85■■□□□ 1.09
USB1-210ENST00000565151 NRXN1Q9ULB1 1477 aa21.85■■□□□ 1.09
USB1-210ENST00000565151 TMEM132EQ6IEE7 984 aa21.84■■□□□ 1.09
USB1-210ENST00000565151 TECPR2O15040 1411 aa21.83■■□□□ 1.09
USB1-210ENST00000565151 PLEKHH1Q9ULM0 1364 aa21.82■■□□□ 1.08
USB1-210ENST00000565151 WAPLQ7Z5K2 1190 aa21.81■■□□□ 1.08
USB1-210ENST00000565151 LRPPRCP42704 1394 aaKnown RBP21.81■■□□□ 1.08
USB1-210ENST00000565151 RGPD8O14715 1765 aaPredicted RBP21.81■■□□□ 1.08
USB1-210ENST00000565151 ACIN1Q9UKV3 1341 aaKnown RBP21.8■■□□□ 1.08
USB1-210ENST00000565151 CDC42BPGQ6DT37 1551 aa21.8■■□□□ 1.08
USB1-210ENST00000565151 MYOM2P54296 1465 aa21.8■■□□□ 1.08
USB1-210ENST00000565151 ORAI2Q96SN7 254 aa21.8■■□□□ 1.08
USB1-210ENST00000565151 STK26Q9P289 416 aa21.8■■□□□ 1.08
Retrieved 100 of 20,778 RNA–protein pairs in 16 ms