RNA–Protein interactions for RNA: ENST00000564865.5

PKD1-228, Transcript of polycystin 1, transient receptor potential channel interacting, humanhuman

TSL 5

Gene PKD1, Length 480 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKD1-228ENST00000564865 NUTM2DQ5VT03 806 aaPredicted RBP20.42■□□□□ 0.86
PKD1-228ENST00000564865 RAB3GAP2Q9H2M9 1393 aa20.42■□□□□ 0.86
PKD1-228ENST00000564865 RIMS2Q9UQ26 1411 aa20.42■□□□□ 0.86
PKD1-228ENST00000564865 ZNF326Q5BKZ1 582 aaKnown RBP20.4■□□□□ 0.86
PKD1-228ENST00000564865 ACIN1Q9UKV3 1341 aaKnown RBP20.4■□□□□ 0.86
PKD1-228ENST00000564865 TRPM2O94759 1503 aa20.39■□□□□ 0.85
PKD1-228ENST00000564865 ZFYVE9O95405 1425 aa20.39■□□□□ 0.85
PKD1-228ENST00000564865 ABCF1Q8NE71 845 aaKnown RBP eCLIP20.39■□□□□ 0.85
PKD1-228ENST00000564865 SLC26A8Q96RN1 970 aa20.39■□□□□ 0.85
PKD1-228ENST00000564865 CLTCL1P53675 1640 aa20.38■□□□□ 0.85
PKD1-228ENST00000564865 CPS1P31327 1500 aa20.34■□□□□ 0.85
PKD1-228ENST00000564865 PLEKHG1Q9ULL1 1385 aa20.34■□□□□ 0.85
PKD1-228ENST00000564865 IQSEC2Q5JU85 1478 aa20.32■□□□□ 0.84
PKD1-228ENST00000564865 KIF1BO60333 1816 aa20.3■□□□□ 0.84
PKD1-228ENST00000564865 STRCP1A6NGW2 1772 aa20.29■□□□□ 0.84
PKD1-228ENST00000564865 HRCP23327 699 aa20.29■□□□□ 0.84
PKD1-228ENST00000564865 CCDC144AA2RUR9 1427 aa20.28■□□□□ 0.84
PKD1-228ENST00000564865 UBAP1LF5GYI3 381 aa20.28■□□□□ 0.84
PKD1-228ENST00000564865 KCNA6P17658 529 aa20.28■□□□□ 0.84
PKD1-228ENST00000564865 TBX22Q9Y458 520 aa20.27■□□□□ 0.84
PKD1-228ENST00000564865 LRRC7Q96NW7 1537 aa20.26■□□□□ 0.83
PKD1-228ENST00000564865 RGL3Q3MIN7 710 aa20.25■□□□□ 0.83
PKD1-228ENST00000564865 NEXMIFQ5QGS0 1516 aa20.24■□□□□ 0.83
PKD1-228ENST00000564865 ADAMTS13Q76LX8 1427 aa20.24■□□□□ 0.83
PKD1-228ENST00000564865 PROSER2Q86WR7 435 aaPredicted RBP20.23■□□□□ 0.83
PKD1-228ENST00000564865 RPGRIP1LQ68CZ1 1315 aa20.23■□□□□ 0.83
PKD1-228ENST00000564865 VGFO15240 615 aaPredicted RBP20.22■□□□□ 0.83
PKD1-228ENST00000564865 RBM33Q96EV2 1170 aaKnown RBP20.21■□□□□ 0.83
PKD1-228ENST00000564865 TOM1O60784 492 aa20.2■□□□□ 0.82
PKD1-228ENST00000564865 SCAF1Q9H7N4 1312 aaKnown RBP20.19■□□□□ 0.82
PKD1-228ENST00000564865 DIP2AQ14689 1571 aa20.18■□□□□ 0.82
PKD1-228ENST00000564865 PIP4K2BP78356 416 aa20.18■□□□□ 0.82
PKD1-228ENST00000564865 TMEM94Q12767 1356 aa20.17■□□□□ 0.82
PKD1-228ENST00000564865 SPATA31E1Q6ZUB1 1445 aa20.17■□□□□ 0.82
PKD1-228ENST00000564865 NWD1Q149M9 1564 aa20.17■□□□□ 0.82
PKD1-228ENST00000564865 SETBP1Q9Y6X0 1596 aa20.17■□□□□ 0.82
PKD1-228ENST00000564865 AMOTL2Q9Y2J4 779 aa20.16■□□□□ 0.82
PKD1-228ENST00000564865 PIK3R4Q99570 1358 aa20.16■□□□□ 0.82
PKD1-228ENST00000564865 ANKRD30BQ9BXX2 1392 aa20.16■□□□□ 0.82
PKD1-228ENST00000564865 NRXN3Q9Y4C0 1643 aa20.16■□□□□ 0.82
PKD1-228ENST00000564865 CHD2O14647 1828 aaKnown RBP20.16■□□□□ 0.82
PKD1-228ENST00000564865 NKTRP30414 1462 aaKnown RBP20.14■□□□□ 0.81
PKD1-228ENST00000564865 TRIM26Q12899 539 aaPredicted RBP20.14■□□□□ 0.81
PKD1-228ENST00000564865 PTPRUQ92729 1446 aa20.13■□□□□ 0.81
PKD1-228ENST00000564865 METP08581 1390 aa20.13■□□□□ 0.81
PKD1-228ENST00000564865 PPLO60437 1756 aa20.13■□□□□ 0.81
PKD1-228ENST00000564865 ADGRF5Q8IZF2 1346 aa20.12■□□□□ 0.81
PKD1-228ENST00000564865 XIRP1Q702N8 1843 aaKnown RBP20.11■□□□□ 0.81
PKD1-228ENST00000564865 C14orf37Q86TY3 774 aa20.1■□□□□ 0.81
PKD1-228ENST00000564865 ALKQ9UM73 1620 aa20.08■□□□□ 0.8
PKD1-228ENST00000564865 MSH6P52701 1360 aa20.07■□□□□ 0.8
PKD1-228ENST00000564865 IFT172Q9UG01 1749 aa20.05■□□□□ 0.8
PKD1-228ENST00000564865 NCOA3Q9Y6Q9 1424 aa20.03■□□□□ 0.8
PKD1-228ENST00000564865 KDM2AQ9Y2K7 1162 aa20.03■□□□□ 0.8
PKD1-228ENST00000564865 XRN1Q8IZH2 1706 aaKnown RBP20.02■□□□□ 0.8
PKD1-228ENST00000564865 HSPA1LP34931 641 aa20.02■□□□□ 0.8
PKD1-228ENST00000564865 DCAF11Q8TEB1 546 aa20.02■□□□□ 0.8
PKD1-228ENST00000564865 SETD1AO15047 1707 aaKnown RBP20.02■□□□□ 0.79
PKD1-228ENST00000564865 C19orf44Q9H6X5 657 aa20.01■□□□□ 0.79
PKD1-228ENST00000564865 TMEM132EQ6IEE7 984 aa20■□□□□ 0.79
PKD1-228ENST00000564865 PIK3C2GO75747 1445 aa20■□□□□ 0.79
PKD1-228ENST00000564865 ATF3P18847 181 aa19.99■□□□□ 0.79
PKD1-228ENST00000564865 CFAP70Q5T0N1 1121 aa19.99■□□□□ 0.79
PKD1-228ENST00000564865 STK26Q9P289 416 aa19.99■□□□□ 0.79
PKD1-228ENST00000564865 MYOM2P54296 1465 aa19.99■□□□□ 0.79
PKD1-228ENST00000564865 C14orf93Q9H972 538 aaKnown RBP19.98■□□□□ 0.79
PKD1-228ENST00000564865 SLAIN2Q9P270 581 aa19.98■□□□□ 0.79
PKD1-228ENST00000564865 CADPS2Q86UW7 1296 aa19.97■□□□□ 0.79
PKD1-228ENST00000564865 ROBO2Q9HCK4 1378 aa19.96■□□□□ 0.79
PKD1-228ENST00000564865 NRXN1Q9ULB1 1477 aa19.96■□□□□ 0.79
PKD1-228ENST00000564865 DHX57Q6P158 1386 aaKnown RBP19.95■□□□□ 0.79
PKD1-228ENST00000564865 FAM135BQ49AJ0 1406 aa19.95■□□□□ 0.78
PKD1-228ENST00000564865 SIPA1L2Q9P2F8 1722 aaPredicted RBP19.95■□□□□ 0.78
PKD1-228ENST00000564865 SIN3AQ96ST3 1273 aa19.94■□□□□ 0.78
PKD1-228ENST00000564865 PTCH1Q13635 1447 aa19.93■□□□□ 0.78
PKD1-228ENST00000564865 STAC3Q96MF2 364 aa19.93■□□□□ 0.78
PKD1-228ENST00000564865 LRPPRCP42704 1394 aaKnown RBP19.93■□□□□ 0.78
PKD1-228ENST00000564865 NEUROD1Q13562 356 aa19.92■□□□□ 0.78
PKD1-228ENST00000564865 ASXL1Q8IXJ9 1541 aa19.92■□□□□ 0.78
PKD1-228ENST00000564865 WAPLQ7Z5K2 1190 aa19.91■□□□□ 0.78
PKD1-228ENST00000564865 YTHDC2Q9H6S0 1430 aaKnown RBP19.91■□□□□ 0.78
PKD1-228ENST00000564865 ADGRL3Q9HAR2 1447 aa19.91■□□□□ 0.78
PKD1-228ENST00000564865 ROBO1Q9Y6N7 1651 aa19.91■□□□□ 0.78
PKD1-228ENST00000564865 PRAG1Q86YV5 1406 aa19.89■□□□□ 0.77
PKD1-228ENST00000564865 ABCC11Q96J66 1382 aa19.89■□□□□ 0.77
PKD1-228ENST00000564865 DCCP43146 1447 aa19.88■□□□□ 0.77
PKD1-228ENST00000564865 LAMC1P11047 1609 aa19.87■□□□□ 0.77
PKD1-228ENST00000564865 NALCNQ8IZF0 1738 aa19.87■□□□□ 0.77
PKD1-228ENST00000564865 TECPR2O15040 1411 aa19.86■□□□□ 0.77
PKD1-228ENST00000564865 PLEKHH1Q9ULM0 1364 aa19.85■□□□□ 0.77
PKD1-228ENST00000564865 PCGF6Q9BYE7 350 aa19.85■□□□□ 0.77
PKD1-228ENST00000564865 MST1RQ04912 1400 aa19.85■□□□□ 0.77
PKD1-228ENST00000564865 L3MBTL2Q969R5 705 aa19.84■□□□□ 0.77
PKD1-228ENST00000564865 SIRT1Q96EB6 747 aa19.84■□□□□ 0.77
PKD1-228ENST00000564865 TRAK1Q9UPV9 953 aa19.84■□□□□ 0.77
PKD1-228ENST00000564865 KNDC1Q76NI1 1749 aa19.83■□□□□ 0.77
PKD1-228ENST00000564865 BRINP3Q76B58 766 aa19.83■□□□□ 0.77
PKD1-228ENST00000564865 SAFB2Q14151 953 aaKnown RBP eCLIP19.82■□□□□ 0.76
PKD1-228ENST00000564865 PRAM1Q96QH2 718 aa19.82■□□□□ 0.76
PKD1-228ENST00000564865 POGKQ9P215 609 aa19.82■□□□□ 0.76
Retrieved 100 of 20,778 RNA–protein pairs in 27 ms