RNA–Protein interactions for RNA: ENST00000563748.5

LPCAT4-205, Transcript of lysophosphatidylcholine acyltransferase 4, humanhuman

TSL 2

Gene LPCAT4, Length 1,357 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LPCAT4-205ENST00000563748 ZFYVE9O95405 1425 aa24.11■■□□□ 1.45
LPCAT4-205ENST00000563748 SCAF1Q9H7N4 1312 aaKnown RBP24.11■■□□□ 1.45
LPCAT4-205ENST00000563748 NUP155O75694 1391 aa24.09■■□□□ 1.45
LPCAT4-205ENST00000563748 HSPA1LP34931 641 aa24.07■■□□□ 1.44
LPCAT4-205ENST00000563748 RIMS2Q9UQ26 1411 aa24.06■■□□□ 1.44
LPCAT4-205ENST00000563748 NWD1Q149M9 1564 aa24.06■■□□□ 1.44
LPCAT4-205ENST00000563748 SLC26A8Q96RN1 970 aa24.04■■□□□ 1.44
LPCAT4-205ENST00000563748 PLEKHG1Q9ULL1 1385 aa24.04■■□□□ 1.44
LPCAT4-205ENST00000563748 KCNA6P17658 529 aa24.03■■□□□ 1.44
LPCAT4-205ENST00000563748 SPHKAPQ2M3C7 1700 aa24.02■■□□□ 1.44
LPCAT4-205ENST00000563748 NKTRP30414 1462 aaKnown RBP24.01■■□□□ 1.43
LPCAT4-205ENST00000563748 CHD2O14647 1828 aaKnown RBP24■■□□□ 1.43
LPCAT4-205ENST00000563748 HDGFP51858 240 aaKnown RBP24■■□□□ 1.43
LPCAT4-205ENST00000563748 ILDR2Q71H61 639 aa24■■□□□ 1.43
LPCAT4-205ENST00000563748 NAIPQ13075 1403 aa23.99■■□□□ 1.43
LPCAT4-205ENST00000563748 TMEM94Q12767 1356 aa23.98■■□□□ 1.43
LPCAT4-205ENST00000563748 PPP1R15AO75807 674 aaPredicted RBP23.97■■□□□ 1.43
LPCAT4-205ENST00000563748 CHGAP10645 457 aaKnown RBP23.97■■□□□ 1.43
LPCAT4-205ENST00000563748 ABCF1Q8NE71 845 aaKnown RBP eCLIP23.97■■□□□ 1.43
LPCAT4-205ENST00000563748 BCANQ96GW7 911 aa23.97■■□□□ 1.43
LPCAT4-205ENST00000563748 MED1Q15648 1581 aaPredicted RBP23.96■■□□□ 1.43
LPCAT4-205ENST00000563748 DIP2AQ14689 1571 aa23.95■■□□□ 1.42
LPCAT4-205ENST00000563748 PROSER2Q86WR7 435 aaPredicted RBP23.93■■□□□ 1.42
LPCAT4-205ENST00000563748 ADAMTS13Q76LX8 1427 aa23.92■■□□□ 1.42
LPCAT4-205ENST00000563748 SENP3Q9H4L4 574 aaPredicted RBP23.91■■□□□ 1.42
LPCAT4-205ENST00000563748 TBX22Q9Y458 520 aa23.91■■□□□ 1.42
LPCAT4-205ENST00000563748 HFM1A2PYH4 1435 aa23.91■■□□□ 1.42
LPCAT4-205ENST00000563748 TRPM2O94759 1503 aa23.89■■□□□ 1.42
LPCAT4-205ENST00000563748 FAM135BQ49AJ0 1406 aa23.89■■□□□ 1.41
LPCAT4-205ENST00000563748 CLTCL1P53675 1640 aa23.89■■□□□ 1.41
LPCAT4-205ENST00000563748 NUTM2DQ5VT03 806 aaPredicted RBP23.88■■□□□ 1.41
LPCAT4-205ENST00000563748 RBM33Q96EV2 1170 aaKnown RBP23.88■■□□□ 1.41
LPCAT4-205ENST00000563748 PIK3R4Q99570 1358 aa23.86■■□□□ 1.41
LPCAT4-205ENST00000563748 ROBO1Q9Y6N7 1651 aa23.86■■□□□ 1.41
LPCAT4-205ENST00000563748 NRXN3Q9Y4C0 1643 aa23.86■■□□□ 1.41
LPCAT4-205ENST00000563748 MSH6P52701 1360 aa23.84■■□□□ 1.41
LPCAT4-205ENST00000563748 SETBP1Q9Y6X0 1596 aa23.84■■□□□ 1.41
LPCAT4-205ENST00000563748 KIF1BO60333 1816 aa23.84■■□□□ 1.41
LPCAT4-205ENST00000563748 SOCS7O14512 581 aa23.82■■□□□ 1.4
LPCAT4-205ENST00000563748 NCOA3Q9Y6Q9 1424 aa23.82■■□□□ 1.4
LPCAT4-205ENST00000563748 NEXMIFQ5QGS0 1516 aa23.81■■□□□ 1.4
LPCAT4-205ENST00000563748 XRN1Q8IZH2 1706 aaKnown RBP23.78■■□□□ 1.4
LPCAT4-205ENST00000563748 PTPRUQ92729 1446 aa23.78■■□□□ 1.4
LPCAT4-205ENST00000563748 ZNF326Q5BKZ1 582 aaKnown RBP23.78■■□□□ 1.4
LPCAT4-205ENST00000563748 TRIM52Q96A61 297 aa23.78■■□□□ 1.4
LPCAT4-205ENST00000563748 SIPA1L2Q9P2F8 1722 aaPredicted RBP23.76■■□□□ 1.39
LPCAT4-205ENST00000563748 SLAIN2Q9P270 581 aa23.75■■□□□ 1.39
LPCAT4-205ENST00000563748 CCER1Q8TC90 406 aaPredicted RBP23.73■■□□□ 1.39
LPCAT4-205ENST00000563748 SLC4A1APQ9BWU0 796 aaKnown RBP23.73■■□□□ 1.39
LPCAT4-205ENST00000563748 AMOTL2Q9Y2J4 779 aa23.73■■□□□ 1.39
LPCAT4-205ENST00000563748 PHLPP1O60346 1717 aa23.71■■□□□ 1.39
LPCAT4-205ENST00000563748 METP08581 1390 aa23.7■■□□□ 1.38
LPCAT4-205ENST00000563748 C14orf37Q86TY3 774 aa23.69■■□□□ 1.38
LPCAT4-205ENST00000563748 PHF23Q9BUL5 403 aaPredicted RBP23.69■■□□□ 1.38
LPCAT4-205ENST00000563748 C19orf44Q9H6X5 657 aa23.69■■□□□ 1.38
LPCAT4-205ENST00000563748 SETD1AO15047 1707 aaKnown RBP23.68■■□□□ 1.38
LPCAT4-205ENST00000563748 PPLO60437 1756 aa23.67■■□□□ 1.38
LPCAT4-205ENST00000563748 CADPS2Q86UW7 1296 aa23.66■■□□□ 1.38
LPCAT4-205ENST00000563748 DCCP43146 1447 aa23.65■■□□□ 1.38
LPCAT4-205ENST00000563748 COL16A1Q07092 1604 aaPredicted RBP23.65■■□□□ 1.38
LPCAT4-205ENST00000563748 RPGRIP1LQ68CZ1 1315 aa23.64■■□□□ 1.37
LPCAT4-205ENST00000563748 ATF3P18847 181 aa23.64■■□□□ 1.37
LPCAT4-205ENST00000563748 AHDC1Q5TGY3 1603 aaPredicted RBP23.62■■□□□ 1.37
LPCAT4-205ENST00000563748 VGFO15240 615 aaPredicted RBP23.62■■□□□ 1.37
LPCAT4-205ENST00000563748 FOXD1Q16676 465 aa23.61■■□□□ 1.37
LPCAT4-205ENST00000563748 NALCNQ8IZF0 1738 aa23.6■■□□□ 1.37
LPCAT4-205ENST00000563748 JCADQ9P266 1359 aa23.59■■□□□ 1.37
LPCAT4-205ENST00000563748 MPHOSPH9Q99550 1183 aa23.58■■□□□ 1.37
LPCAT4-205ENST00000563748 RGS17Q9UGC6 210 aaPredicted RBP23.58■■□□□ 1.37
LPCAT4-205ENST00000563748 CCDC144AA2RUR9 1427 aa23.58■■□□□ 1.37
LPCAT4-205ENST00000563748 ADGRL3Q9HAR2 1447 aa23.58■■□□□ 1.37
LPCAT4-205ENST00000563748 PRAG1Q86YV5 1406 aa23.57■■□□□ 1.36
LPCAT4-205ENST00000563748 IFT172Q9UG01 1749 aa23.57■■□□□ 1.36
LPCAT4-205ENST00000563748 PTCH1Q13635 1447 aa23.56■■□□□ 1.36
LPCAT4-205ENST00000563748 MST1RQ04912 1400 aa23.55■■□□□ 1.36
LPCAT4-205ENST00000563748 SPATA31E1Q6ZUB1 1445 aa23.55■■□□□ 1.36
LPCAT4-205ENST00000563748 SETD5Q9C0A6 1442 aa23.55■■□□□ 1.36
LPCAT4-205ENST00000563748 ASXL1Q8IXJ9 1541 aa23.54■■□□□ 1.36
LPCAT4-205ENST00000563748 BRINP3Q76B58 766 aa23.54■■□□□ 1.36
LPCAT4-205ENST00000563748 SHPRHQ149N8 1683 aa23.54■■□□□ 1.36
LPCAT4-205ENST00000563748 ACIN1Q9UKV3 1341 aaKnown RBP23.54■■□□□ 1.36
LPCAT4-205ENST00000563748 NHSL1Q5SYE7 1610 aa23.53■■□□□ 1.36
LPCAT4-205ENST00000563748 ROBO2Q9HCK4 1378 aa23.51■■□□□ 1.35
LPCAT4-205ENST00000563748 ANKRD30BQ9BXX2 1392 aa23.47■■□□□ 1.35
LPCAT4-205ENST00000563748 SPATA31A6Q5VVP1 1343 aa23.47■■□□□ 1.35
LPCAT4-205ENST00000563748 ADGRF5Q8IZF2 1346 aa23.47■■□□□ 1.35
LPCAT4-205ENST00000563748 LRP6O75581 1613 aa23.46■■□□□ 1.35
LPCAT4-205ENST00000563748 CLSPNQ9HAW4 1339 aa23.46■■□□□ 1.35
LPCAT4-205ENST00000563748 RGL3Q3MIN7 710 aa23.45■■□□□ 1.34
LPCAT4-205ENST00000563748 RAB3GAP2Q9H2M9 1393 aa23.45■■□□□ 1.34
LPCAT4-205ENST00000563748 LAMC1P11047 1609 aa23.43■■□□□ 1.34
LPCAT4-205ENST00000563748 POTEAQ6S8J7 498 aa23.43■■□□□ 1.34
LPCAT4-205ENST00000563748 C1orf167Q5SNV9 1468 aa23.43■■□□□ 1.34
LPCAT4-205ENST00000563748 PIK3C2GO75747 1445 aa23.42■■□□□ 1.34
LPCAT4-205ENST00000563748 KNDC1Q76NI1 1749 aa23.42■■□□□ 1.34
LPCAT4-205ENST00000563748 TECPR2O15040 1411 aa23.4■■□□□ 1.34
LPCAT4-205ENST00000563748 CDC42BPGQ6DT37 1551 aa23.4■■□□□ 1.34
LPCAT4-205ENST00000563748 LRPPRCP42704 1394 aaKnown RBP23.37■■□□□ 1.33
LPCAT4-205ENST00000563748 NRXN1Q9ULB1 1477 aa23.36■■□□□ 1.33
LPCAT4-205ENST00000563748 MYOM2P54296 1465 aa23.36■■□□□ 1.33
Retrieved 100 of 20,778 RNA–protein pairs in 27.4 ms