RNA–Protein interactions for RNA: ENST00000563597.5

PPP4C-206, Transcript of protein phosphatase 4 catalytic subunit, humanhuman

TSL 3

Gene PPP4C, Length 815 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPP4C-206ENST00000563597 SPHKAPQ2M3C7 1700 aa37.44■■■■□ 3.58
PPP4C-206ENST00000563597 PLEKHG1Q9ULL1 1385 aa37.43■■■■□ 3.58
PPP4C-206ENST00000563597 PPP1R15AO75807 674 aaPredicted RBP37.43■■■■□ 3.58
PPP4C-206ENST00000563597 ABCF1Q8NE71 845 aaKnown RBP eCLIP37.42■■■■□ 3.58
PPP4C-206ENST00000563597 BCANQ96GW7 911 aa37.41■■■■□ 3.58
PPP4C-206ENST00000563597 SCAF1Q9H7N4 1312 aaKnown RBP37.39■■■■□ 3.58
PPP4C-206ENST00000563597 PIP4K2BP78356 416 aa37.39■■■■□ 3.58
PPP4C-206ENST00000563597 KCNA6P17658 529 aa37.38■■■■□ 3.57
PPP4C-206ENST00000563597 ALKQ9UM73 1620 aa37.36■■■■□ 3.57
PPP4C-206ENST00000563597 TRIM52Q96A61 297 aa37.33■■■■□ 3.57
PPP4C-206ENST00000563597 NWD1Q149M9 1564 aa37.33■■■■□ 3.57
PPP4C-206ENST00000563597 XIRP1Q702N8 1843 aaKnown RBP37.31■■■■□ 3.56
PPP4C-206ENST00000563597 TRPM2O94759 1503 aa37.31■■■■□ 3.56
PPP4C-206ENST00000563597 NKTRP30414 1462 aaKnown RBP37.3■■■■□ 3.56
PPP4C-206ENST00000563597 SENP3Q9H4L4 574 aaPredicted RBP37.27■■■■□ 3.56
PPP4C-206ENST00000563597 TBX22Q9Y458 520 aa37.27■■■■□ 3.56
PPP4C-206ENST00000563597 TMEM94Q12767 1356 aa37.27■■■■□ 3.56
PPP4C-206ENST00000563597 NUTM2DQ5VT03 806 aaPredicted RBP37.26■■■■□ 3.56
PPP4C-206ENST00000563597 DIP2AQ14689 1571 aa37.25■■■■□ 3.55
PPP4C-206ENST00000563597 CLTCL1P53675 1640 aa37.25■■■■□ 3.55
PPP4C-206ENST00000563597 PROSER2Q86WR7 435 aaPredicted RBP37.24■■■■□ 3.55
PPP4C-206ENST00000563597 HSPA1LP34931 641 aa37.23■■■■□ 3.55
PPP4C-206ENST00000563597 SLC4A1APQ9BWU0 796 aaKnown RBP37.23■■■■□ 3.55
PPP4C-206ENST00000563597 CHD2O14647 1828 aaKnown RBP37.22■■■■□ 3.55
PPP4C-206ENST00000563597 ADAMTS13Q76LX8 1427 aa37.22■■■■□ 3.55
PPP4C-206ENST00000563597 DISP3Q9P2K9 1392 aa37.19■■■■□ 3.54
PPP4C-206ENST00000563597 ZNF326Q5BKZ1 582 aaKnown RBP37.19■■■■□ 3.54
PPP4C-206ENST00000563597 PIK3R4Q99570 1358 aa37.17■■■■□ 3.54
PPP4C-206ENST00000563597 KIF1BO60333 1816 aa37.15■■■■□ 3.54
PPP4C-206ENST00000563597 SETBP1Q9Y6X0 1596 aa37.12■■■■□ 3.53
PPP4C-206ENST00000563597 RBM33Q96EV2 1170 aaKnown RBP37.11■■■■□ 3.53
PPP4C-206ENST00000563597 NEXMIFQ5QGS0 1516 aa37.1■■■■□ 3.53
PPP4C-206ENST00000563597 ACIN1Q9UKV3 1341 aaKnown RBP37.09■■■■□ 3.53
PPP4C-206ENST00000563597 NRXN3Q9Y4C0 1643 aa37.07■■■■□ 3.53
PPP4C-206ENST00000563597 MSH6P52701 1360 aa37.07■■■■□ 3.53
PPP4C-206ENST00000563597 NCOA3Q9Y6Q9 1424 aa37.06■■■■□ 3.52
PPP4C-206ENST00000563597 FAM135BQ49AJ0 1406 aa37.04■■■■□ 3.52
PPP4C-206ENST00000563597 SETD5Q9C0A6 1442 aa37.02■■■■□ 3.52
PPP4C-206ENST00000563597 MPHOSPH9Q99550 1183 aa37■■■■□ 3.51
PPP4C-206ENST00000563597 FOXD1Q16676 465 aa36.99■■■■□ 3.51
PPP4C-206ENST00000563597 AMOTL2Q9Y2J4 779 aa36.99■■■■□ 3.51
PPP4C-206ENST00000563597 PTPRUQ92729 1446 aa36.99■■■■□ 3.51
PPP4C-206ENST00000563597 RPGRIP1LQ68CZ1 1315 aa36.97■■■■□ 3.51
PPP4C-206ENST00000563597 VGFO15240 615 aaPredicted RBP36.95■■■■□ 3.51
PPP4C-206ENST00000563597 CCDC144AA2RUR9 1427 aa36.94■■■■□ 3.5
PPP4C-206ENST00000563597 XRN1Q8IZH2 1706 aaKnown RBP36.93■■■■□ 3.5
PPP4C-206ENST00000563597 C14orf37Q86TY3 774 aa36.93■■■■□ 3.5
PPP4C-206ENST00000563597 ROBO1Q9Y6N7 1651 aa36.93■■■■□ 3.5
PPP4C-206ENST00000563597 METP08581 1390 aa36.92■■■■□ 3.5
PPP4C-206ENST00000563597 MED1Q15648 1581 aaPredicted RBP36.91■■■■□ 3.5
PPP4C-206ENST00000563597 SLAIN2Q9P270 581 aa36.91■■■■□ 3.5
PPP4C-206ENST00000563597 C19orf44Q9H6X5 657 aa36.89■■■■□ 3.5
PPP4C-206ENST00000563597 PPLO60437 1756 aa36.87■■■■□ 3.49
PPP4C-206ENST00000563597 RAB3GAP2Q9H2M9 1393 aa36.87■■■■□ 3.49
PPP4C-206ENST00000563597 SIPA1L2Q9P2F8 1722 aaPredicted RBP36.85■■■■□ 3.49
PPP4C-206ENST00000563597 ILDR2Q71H61 639 aa36.85■■■■□ 3.49
PPP4C-206ENST00000563597 CADPS2Q86UW7 1296 aa36.85■■■■□ 3.49
PPP4C-206ENST00000563597 ATF3P18847 181 aa36.82■■■■□ 3.48
PPP4C-206ENST00000563597 SPATA31E1Q6ZUB1 1445 aa36.82■■■■□ 3.48
PPP4C-206ENST00000563597 SETD1AO15047 1707 aaKnown RBP36.79■■■■□ 3.48
PPP4C-206ENST00000563597 DCCP43146 1447 aa36.79■■■■□ 3.48
PPP4C-206ENST00000563597 RGL3Q3MIN7 710 aa36.74■■■■□ 3.47
PPP4C-206ENST00000563597 ANKRD30BQ9BXX2 1392 aa36.74■■■■□ 3.47
PPP4C-206ENST00000563597 PTCH1Q13635 1447 aa36.71■■■■□ 3.47
PPP4C-206ENST00000563597 IFT172Q9UG01 1749 aa36.71■■■■□ 3.47
PPP4C-206ENST00000563597 PRAG1Q86YV5 1406 aa36.7■■■■□ 3.47
PPP4C-206ENST00000563597 PHLPP1O60346 1717 aa36.7■■■■□ 3.47
PPP4C-206ENST00000563597 ADGRL3Q9HAR2 1447 aa36.69■■■■□ 3.46
PPP4C-206ENST00000563597 ADGRF5Q8IZF2 1346 aa36.67■■■■□ 3.46
PPP4C-206ENST00000563597 HRCP23327 699 aa36.67■■■■□ 3.46
PPP4C-206ENST00000563597 PHF23Q9BUL5 403 aaPredicted RBP36.67■■■■□ 3.46
PPP4C-206ENST00000563597 NALCNQ8IZF0 1738 aa36.63■■■■□ 3.45
PPP4C-206ENST00000563597 ROBO2Q9HCK4 1378 aa36.63■■■■□ 3.45
PPP4C-206ENST00000563597 MST1RQ04912 1400 aa36.61■■■■□ 3.45
PPP4C-206ENST00000563597 AHDC1Q5TGY3 1603 aaPredicted RBP36.61■■■■□ 3.45
PPP4C-206ENST00000563597 COL16A1Q07092 1604 aaPredicted RBP36.6■■■■□ 3.45
PPP4C-206ENST00000563597 SOCS7O14512 581 aa36.59■■■■□ 3.45
PPP4C-206ENST00000563597 BRINP3Q76B58 766 aa36.59■■■■□ 3.45
PPP4C-206ENST00000563597 PIK3C2GO75747 1445 aa36.59■■■■□ 3.45
PPP4C-206ENST00000563597 JCADQ9P266 1359 aa36.58■■■■□ 3.45
PPP4C-206ENST00000563597 ASXL1Q8IXJ9 1541 aa36.54■■■■□ 3.44
PPP4C-206ENST00000563597 MYOM2P54296 1465 aa36.52■■■■□ 3.44
PPP4C-206ENST00000563597 TECPR2O15040 1411 aa36.51■■■■□ 3.43
PPP4C-206ENST00000563597 NRXN1Q9ULB1 1477 aa36.5■■■■□ 3.43
PPP4C-206ENST00000563597 LRPPRCP42704 1394 aaKnown RBP36.49■■■■□ 3.43
PPP4C-206ENST00000563597 ABCC11Q96J66 1382 aa36.46■■■■□ 3.43
PPP4C-206ENST00000563597 C1orf167Q5SNV9 1468 aa36.45■■■■□ 3.43
PPP4C-206ENST00000563597 NHSL1Q5SYE7 1610 aa36.45■■■■□ 3.42
PPP4C-206ENST00000563597 STK26Q9P289 416 aa36.44■■■■□ 3.42
PPP4C-206ENST00000563597 KNDC1Q76NI1 1749 aa36.44■■■■□ 3.42
PPP4C-206ENST00000563597 LAMC1P11047 1609 aa36.44■■■■□ 3.42
PPP4C-206ENST00000563597 TMEM132EQ6IEE7 984 aa36.43■■■■□ 3.42
PPP4C-206ENST00000563597 C14orf93Q9H972 538 aaKnown RBP36.43■■■■□ 3.42
PPP4C-206ENST00000563597 SHPRHQ149N8 1683 aa36.42■■■■□ 3.42
PPP4C-206ENST00000563597 SPATA31A6Q5VVP1 1343 aa36.42■■■■□ 3.42
PPP4C-206ENST00000563597 RGS17Q9UGC6 210 aaPredicted RBP36.41■■■■□ 3.42
PPP4C-206ENST00000563597 YTHDC2Q9H6S0 1430 aaKnown RBP36.41■■■■□ 3.42
PPP4C-206ENST00000563597 CDC42BPGQ6DT37 1551 aa36.4■■■■□ 3.42
PPP4C-206ENST00000563597 CFAP70Q5T0N1 1121 aa36.35■■■■□ 3.41
PPP4C-206ENST00000563597 WAPLQ7Z5K2 1190 aa36.35■■■■□ 3.41
Retrieved 100 of 20,778 RNA–protein pairs in 12.2 ms