RNA–Protein interactions for RNA: ENST00000563560.1

RPUSD1-204, Transcript of RNA pseudouridylate synthase domain containing 1, humanhuman

TSL 2

Gene RPUSD1, Length 587 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPUSD1-204ENST00000563560 NRXN3Q9Y4C0 1643 aa22.31■■□□□ 1.16
RPUSD1-204ENST00000563560 CHD2O14647 1828 aaKnown RBP22.31■■□□□ 1.16
RPUSD1-204ENST00000563560 STAG3Q9UJ98 1225 aa22.31■■□□□ 1.16
RPUSD1-204ENST00000563560 EID1Q9Y6B2 187 aa22.31■■□□□ 1.16
RPUSD1-204ENST00000563560 PLEKHG1Q9ULL1 1385 aa22.3■■□□□ 1.16
RPUSD1-204ENST00000563560 SETD5Q9C0A6 1442 aa22.29■■□□□ 1.16
RPUSD1-204ENST00000563560 NEXMIFQ5QGS0 1516 aa22.28■■□□□ 1.16
RPUSD1-204ENST00000563560 ADAMTS13Q76LX8 1427 aa22.27■■□□□ 1.16
RPUSD1-204ENST00000563560 DIP2AQ14689 1571 aa22.25■■□□□ 1.15
RPUSD1-204ENST00000563560 TRIM52Q96A61 297 aa22.24■■□□□ 1.15
RPUSD1-204ENST00000563560 SETBP1Q9Y6X0 1596 aa22.24■■□□□ 1.15
RPUSD1-204ENST00000563560 SLC4A1APQ9BWU0 796 aaKnown RBP22.23■■□□□ 1.15
RPUSD1-204ENST00000563560 RAB3GAP2Q9H2M9 1393 aa22.22■■□□□ 1.15
RPUSD1-204ENST00000563560 PPLO60437 1756 aa22.22■■□□□ 1.15
RPUSD1-204ENST00000563560 SETD1AO15047 1707 aaKnown RBP22.21■■□□□ 1.15
RPUSD1-204ENST00000563560 IFT172Q9UG01 1749 aa22.2■■□□□ 1.14
RPUSD1-204ENST00000563560 SLC26A8Q96RN1 970 aa22.2■■□□□ 1.14
RPUSD1-204ENST00000563560 NKTRP30414 1462 aaKnown RBP22.2■■□□□ 1.14
RPUSD1-204ENST00000563560 MPHOSPH9Q99550 1183 aa22.19■■□□□ 1.14
RPUSD1-204ENST00000563560 CHGAP10645 457 aaKnown RBP22.18■■□□□ 1.14
RPUSD1-204ENST00000563560 ABCF1Q8NE71 845 aaKnown RBP eCLIP22.18■■□□□ 1.14
RPUSD1-204ENST00000563560 KCNA6P17658 529 aa22.17■■□□□ 1.14
RPUSD1-204ENST00000563560 FOXD1Q16676 465 aa22.17■■□□□ 1.14
RPUSD1-204ENST00000563560 SPATA31E1Q6ZUB1 1445 aa22.16■■□□□ 1.14
RPUSD1-204ENST00000563560 NUTM2DQ5VT03 806 aaPredicted RBP22.16■■□□□ 1.14
RPUSD1-204ENST00000563560 TBX22Q9Y458 520 aa22.16■■□□□ 1.14
RPUSD1-204ENST00000563560 XRN1Q8IZH2 1706 aaKnown RBP22.16■■□□□ 1.14
RPUSD1-204ENST00000563560 HDGFP51858 240 aaKnown RBP22.14■■□□□ 1.13
RPUSD1-204ENST00000563560 PTPRUQ92729 1446 aa22.14■■□□□ 1.13
RPUSD1-204ENST00000563560 ACIN1Q9UKV3 1341 aaKnown RBP22.13■■□□□ 1.13
RPUSD1-204ENST00000563560 PIK3R4Q99570 1358 aa22.12■■□□□ 1.13
RPUSD1-204ENST00000563560 UBAP1LF5GYI3 381 aa22.12■■□□□ 1.13
RPUSD1-204ENST00000563560 HRCP23327 699 aa22.11■■□□□ 1.13
RPUSD1-204ENST00000563560 TMEM94Q12767 1356 aa22.11■■□□□ 1.13
RPUSD1-204ENST00000563560 PPP1R15AO75807 674 aaPredicted RBP22.1■■□□□ 1.13
RPUSD1-204ENST00000563560 CCDC144AA2RUR9 1427 aa22.08■■□□□ 1.13
RPUSD1-204ENST00000563560 SENP3Q9H4L4 574 aaPredicted RBP22.08■■□□□ 1.13
RPUSD1-204ENST00000563560 METP08581 1390 aa22.05■■□□□ 1.12
RPUSD1-204ENST00000563560 RPGRIP1LQ68CZ1 1315 aa22.05■■□□□ 1.12
RPUSD1-204ENST00000563560 ZNF326Q5BKZ1 582 aaKnown RBP22.04■■□□□ 1.12
RPUSD1-204ENST00000563560 ANKRD30BQ9BXX2 1392 aa22.03■■□□□ 1.12
RPUSD1-204ENST00000563560 TOM1O60784 492 aa22.03■■□□□ 1.12
RPUSD1-204ENST00000563560 PRAG1Q86YV5 1406 aa22.03■■□□□ 1.12
RPUSD1-204ENST00000563560 NCOA3Q9Y6Q9 1424 aa22.03■■□□□ 1.12
RPUSD1-204ENST00000563560 SIPA1L2Q9P2F8 1722 aaPredicted RBP22.02■■□□□ 1.12
RPUSD1-204ENST00000563560 RBM33Q96EV2 1170 aaKnown RBP22.01■■□□□ 1.11
RPUSD1-204ENST00000563560 BCANQ96GW7 911 aa22.01■■□□□ 1.11
RPUSD1-204ENST00000563560 PROSER2Q86WR7 435 aaPredicted RBP22■■□□□ 1.11
RPUSD1-204ENST00000563560 NRXN1Q9ULB1 1477 aa21.99■■□□□ 1.11
RPUSD1-204ENST00000563560 ASXL1Q8IXJ9 1541 aa21.98■■□□□ 1.11
RPUSD1-204ENST00000563560 VGFO15240 615 aaPredicted RBP21.97■■□□□ 1.11
RPUSD1-204ENST00000563560 AMOTL2Q9Y2J4 779 aa21.97■■□□□ 1.11
RPUSD1-204ENST00000563560 ROBO1Q9Y6N7 1651 aa21.97■■□□□ 1.11
RPUSD1-204ENST00000563560 NALCNQ8IZF0 1738 aa21.97■■□□□ 1.11
RPUSD1-204ENST00000563560 ADGRF5Q8IZF2 1346 aa21.96■■□□□ 1.11
RPUSD1-204ENST00000563560 PIK3C2GO75747 1445 aa21.96■■□□□ 1.11
RPUSD1-204ENST00000563560 HSPA1LP34931 641 aa21.95■■□□□ 1.1
RPUSD1-204ENST00000563560 FAM135BQ49AJ0 1406 aa21.95■■□□□ 1.1
RPUSD1-204ENST00000563560 PIP4K2BP78356 416 aa21.94■■□□□ 1.1
RPUSD1-204ENST00000563560 MYOM2P54296 1465 aa21.94■■□□□ 1.1
RPUSD1-204ENST00000563560 PTCH1Q13635 1447 aa21.93■■□□□ 1.1
RPUSD1-204ENST00000563560 KNDC1Q76NI1 1749 aa21.92■■□□□ 1.1
RPUSD1-204ENST00000563560 MSH6P52701 1360 aa21.91■■□□□ 1.1
RPUSD1-204ENST00000563560 RGL3Q3MIN7 710 aa21.89■■□□□ 1.09
RPUSD1-204ENST00000563560 DCCP43146 1447 aa21.89■■□□□ 1.09
RPUSD1-204ENST00000563560 ROBO2Q9HCK4 1378 aa21.88■■□□□ 1.09
RPUSD1-204ENST00000563560 LAMC1P11047 1609 aa21.88■■□□□ 1.09
RPUSD1-204ENST00000563560 TECPR2O15040 1411 aa21.87■■□□□ 1.09
RPUSD1-204ENST00000563560 ADGRL3Q9HAR2 1447 aa21.86■■□□□ 1.09
RPUSD1-204ENST00000563560 SCAF1Q9H7N4 1312 aaKnown RBP21.85■■□□□ 1.09
RPUSD1-204ENST00000563560 C19orf44Q9H6X5 657 aa21.85■■□□□ 1.09
RPUSD1-204ENST00000563560 DHX57Q6P158 1386 aaKnown RBP21.84■■□□□ 1.09
RPUSD1-204ENST00000563560 SLAIN2Q9P270 581 aa21.83■■□□□ 1.09
RPUSD1-204ENST00000563560 MST1RQ04912 1400 aa21.82■■□□□ 1.08
RPUSD1-204ENST00000563560 COL16A1Q07092 1604 aaPredicted RBP21.82■■□□□ 1.08
RPUSD1-204ENST00000563560 ADGRB1O14514 1584 aa21.82■■□□□ 1.08
RPUSD1-204ENST00000563560 AHDC1Q5TGY3 1603 aaPredicted RBP21.81■■□□□ 1.08
RPUSD1-204ENST00000563560 MED1Q15648 1581 aaPredicted RBP21.81■■□□□ 1.08
RPUSD1-204ENST00000563560 PHLPP1O60346 1717 aa21.8■■□□□ 1.08
RPUSD1-204ENST00000563560 LRPPRCP42704 1394 aaKnown RBP21.8■■□□□ 1.08
RPUSD1-204ENST00000563560 C14orf93Q9H972 538 aaKnown RBP21.8■■□□□ 1.08
RPUSD1-204ENST00000563560 NHSL1Q5SYE7 1610 aa21.8■■□□□ 1.08
RPUSD1-204ENST00000563560 ABCC11Q96J66 1382 aa21.78■■□□□ 1.08
RPUSD1-204ENST00000563560 CADPS2Q86UW7 1296 aa21.77■■□□□ 1.08
RPUSD1-204ENST00000563560 YTHDC2Q9H6S0 1430 aaKnown RBP21.77■■□□□ 1.08
RPUSD1-204ENST00000563560 CDC42BPGQ6DT37 1551 aa21.77■■□□□ 1.08
RPUSD1-204ENST00000563560 CFAP70Q5T0N1 1121 aa21.74■■□□□ 1.07
RPUSD1-204ENST00000563560 TMEM132EQ6IEE7 984 aa21.74■■□□□ 1.07
RPUSD1-204ENST00000563560 PLEKHH1Q9ULM0 1364 aa21.73■■□□□ 1.07
RPUSD1-204ENST00000563560 KIAA1210Q9ULL0 1709 aa21.72■■□□□ 1.07
RPUSD1-204ENST00000563560 DLC1Q96QB1 1528 aa21.72■■□□□ 1.07
RPUSD1-204ENST00000563560 ATF3P18847 181 aa21.72■■□□□ 1.07
RPUSD1-204ENST00000563560 BRINP3Q76B58 766 aa21.71■■□□□ 1.07
RPUSD1-204ENST00000563560 C14orf37Q86TY3 774 aa21.71■■□□□ 1.07
RPUSD1-204ENST00000563560 FMN2Q9NZ56 1722 aa21.71■■□□□ 1.07
RPUSD1-204ENST00000563560 C1orf167Q5SNV9 1468 aa21.71■■□□□ 1.07
RPUSD1-204ENST00000563560 SHPRHQ149N8 1683 aa21.7■■□□□ 1.06
RPUSD1-204ENST00000563560 SIRT1Q96EB6 747 aa21.69■■□□□ 1.06
RPUSD1-204ENST00000563560 STAC3Q96MF2 364 aa21.69■■□□□ 1.06
RPUSD1-204ENST00000563560 DISP3Q9P2K9 1392 aa21.68■■□□□ 1.06
Retrieved 100 of 20,778 RNA–protein pairs in 18.2 ms