RNA–Protein interactions for RNA: ENST00000561896.1

MSLN-203, Transcript of mesothelin, humanhuman

TSL 5

Gene MSLN, Length 1,195 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSLN-203ENST00000561896 ABCF1Q8NE71 845 aaKnown RBP eCLIP38.37■■■■□ 3.73
MSLN-203ENST00000561896 CHGAP10645 457 aaKnown RBP38.33■■■■□ 3.73
MSLN-203ENST00000561896 KCNA6P17658 529 aa38.33■■■■□ 3.73
MSLN-203ENST00000561896 SLC26A8Q96RN1 970 aa38.33■■■■□ 3.73
MSLN-203ENST00000561896 PPP1R15AO75807 674 aaPredicted RBP38.31■■■■□ 3.72
MSLN-203ENST00000561896 ALKQ9UM73 1620 aa38.3■■■■□ 3.72
MSLN-203ENST00000561896 XIRP1Q702N8 1843 aaKnown RBP38.29■■■■□ 3.72
MSLN-203ENST00000561896 NWD1Q149M9 1564 aa38.27■■■■□ 3.72
MSLN-203ENST00000561896 BCANQ96GW7 911 aa38.27■■■■□ 3.72
MSLN-203ENST00000561896 TRPM2O94759 1503 aa38.26■■■■□ 3.72
MSLN-203ENST00000561896 PIP4K2BP78356 416 aa38.25■■■■□ 3.71
MSLN-203ENST00000561896 NKTRP30414 1462 aaKnown RBP38.24■■■■□ 3.71
MSLN-203ENST00000561896 TBX22Q9Y458 520 aa38.23■■■■□ 3.71
MSLN-203ENST00000561896 SCAF1Q9H7N4 1312 aaKnown RBP38.22■■■■□ 3.71
MSLN-203ENST00000561896 TRIM52Q96A61 297 aa38.22■■■■□ 3.71
MSLN-203ENST00000561896 CHD2O14647 1828 aaKnown RBP38.22■■■■□ 3.71
MSLN-203ENST00000561896 DIP2AQ14689 1571 aa38.2■■■■□ 3.71
MSLN-203ENST00000561896 CLTCL1P53675 1640 aa38.18■■■■□ 3.7
MSLN-203ENST00000561896 TMEM94Q12767 1356 aa38.17■■■■□ 3.7
MSLN-203ENST00000561896 ADAMTS13Q76LX8 1427 aa38.16■■■■□ 3.7
MSLN-203ENST00000561896 SLC4A1APQ9BWU0 796 aaKnown RBP38.15■■■■□ 3.7
MSLN-203ENST00000561896 KIF1BO60333 1816 aa38.15■■■■□ 3.7
MSLN-203ENST00000561896 PROSER2Q86WR7 435 aaPredicted RBP38.14■■■■□ 3.7
MSLN-203ENST00000561896 PIK3R4Q99570 1358 aa38.14■■■■□ 3.7
MSLN-203ENST00000561896 HSPA1LP34931 641 aa38.13■■■■□ 3.69
MSLN-203ENST00000561896 NUTM2DQ5VT03 806 aaPredicted RBP38.12■■■■□ 3.69
MSLN-203ENST00000561896 ACIN1Q9UKV3 1341 aaKnown RBP38.11■■■■□ 3.69
MSLN-203ENST00000561896 ZNF326Q5BKZ1 582 aaKnown RBP38.07■■■■□ 3.68
MSLN-203ENST00000561896 SENP3Q9H4L4 574 aaPredicted RBP38.07■■■■□ 3.68
MSLN-203ENST00000561896 SETBP1Q9Y6X0 1596 aa38.06■■■■□ 3.68
MSLN-203ENST00000561896 DISP3Q9P2K9 1392 aa38.05■■■■□ 3.68
MSLN-203ENST00000561896 NCOA3Q9Y6Q9 1424 aa38.04■■■■□ 3.68
MSLN-203ENST00000561896 NEXMIFQ5QGS0 1516 aa38.03■■■■□ 3.68
MSLN-203ENST00000561896 NRXN3Q9Y4C0 1643 aa38.02■■■■□ 3.68
MSLN-203ENST00000561896 FAM135BQ49AJ0 1406 aa37.99■■■■□ 3.67
MSLN-203ENST00000561896 MSH6P52701 1360 aa37.98■■■■□ 3.67
MSLN-203ENST00000561896 RBM33Q96EV2 1170 aaKnown RBP37.96■■■■□ 3.67
MSLN-203ENST00000561896 SETD5Q9C0A6 1442 aa37.95■■■■□ 3.67
MSLN-203ENST00000561896 RPGRIP1LQ68CZ1 1315 aa37.94■■■■□ 3.66
MSLN-203ENST00000561896 MPHOSPH9Q99550 1183 aa37.94■■■■□ 3.66
MSLN-203ENST00000561896 PTPRUQ92729 1446 aa37.9■■■■□ 3.66
MSLN-203ENST00000561896 AMOTL2Q9Y2J4 779 aa37.9■■■■□ 3.66
MSLN-203ENST00000561896 VGFO15240 615 aaPredicted RBP37.89■■■■□ 3.66
MSLN-203ENST00000561896 XRN1Q8IZH2 1706 aaKnown RBP37.88■■■■□ 3.65
MSLN-203ENST00000561896 FOXD1Q16676 465 aa37.87■■■■□ 3.65
MSLN-203ENST00000561896 CCDC144AA2RUR9 1427 aa37.86■■■■□ 3.65
MSLN-203ENST00000561896 PPLO60437 1756 aa37.84■■■■□ 3.65
MSLN-203ENST00000561896 ROBO1Q9Y6N7 1651 aa37.84■■■■□ 3.65
MSLN-203ENST00000561896 METP08581 1390 aa37.83■■■■□ 3.65
MSLN-203ENST00000561896 C19orf44Q9H6X5 657 aa37.82■■■■□ 3.64
MSLN-203ENST00000561896 SLAIN2Q9P270 581 aa37.82■■■■□ 3.64
MSLN-203ENST00000561896 MED1Q15648 1581 aaPredicted RBP37.8■■■■□ 3.64
MSLN-203ENST00000561896 SIPA1L2Q9P2F8 1722 aaPredicted RBP37.79■■■■□ 3.64
MSLN-203ENST00000561896 C14orf37Q86TY3 774 aa37.79■■■■□ 3.64
MSLN-203ENST00000561896 RAB3GAP2Q9H2M9 1393 aa37.78■■■■□ 3.64
MSLN-203ENST00000561896 CADPS2Q86UW7 1296 aa37.77■■■■□ 3.64
MSLN-203ENST00000561896 SPATA31E1Q6ZUB1 1445 aa37.76■■■■□ 3.63
MSLN-203ENST00000561896 SETD1AO15047 1707 aaKnown RBP37.75■■■■□ 3.63
MSLN-203ENST00000561896 DCCP43146 1447 aa37.73■■■■□ 3.63
MSLN-203ENST00000561896 ATF3P18847 181 aa37.72■■■■□ 3.63
MSLN-203ENST00000561896 ILDR2Q71H61 639 aa37.71■■■■□ 3.63
MSLN-203ENST00000561896 ANKRD30BQ9BXX2 1392 aa37.68■■■■□ 3.62
MSLN-203ENST00000561896 HRCP23327 699 aa37.68■■■■□ 3.62
MSLN-203ENST00000561896 PRAG1Q86YV5 1406 aa37.68■■■■□ 3.62
MSLN-203ENST00000561896 IFT172Q9UG01 1749 aa37.67■■■■□ 3.62
MSLN-203ENST00000561896 PTCH1Q13635 1447 aa37.65■■■■□ 3.62
MSLN-203ENST00000561896 PHLPP1O60346 1717 aa37.62■■■■□ 3.61
MSLN-203ENST00000561896 RGL3Q3MIN7 710 aa37.62■■■■□ 3.61
MSLN-203ENST00000561896 ADGRL3Q9HAR2 1447 aa37.61■■■■□ 3.61
MSLN-203ENST00000561896 ADGRF5Q8IZF2 1346 aa37.58■■■■□ 3.61
MSLN-203ENST00000561896 NALCNQ8IZF0 1738 aa37.55■■■■□ 3.6
MSLN-203ENST00000561896 AHDC1Q5TGY3 1603 aaPredicted RBP37.54■■■■□ 3.6
MSLN-203ENST00000561896 ROBO2Q9HCK4 1378 aa37.53■■■■□ 3.6
MSLN-203ENST00000561896 MST1RQ04912 1400 aa37.53■■■■□ 3.6
MSLN-203ENST00000561896 COL16A1Q07092 1604 aaPredicted RBP37.52■■■■□ 3.6
MSLN-203ENST00000561896 PHF23Q9BUL5 403 aaPredicted RBP37.52■■■■□ 3.6
MSLN-203ENST00000561896 PIK3C2GO75747 1445 aa37.52■■■■□ 3.6
MSLN-203ENST00000561896 BRINP3Q76B58 766 aa37.49■■■■□ 3.59
MSLN-203ENST00000561896 JCADQ9P266 1359 aa37.49■■■■□ 3.59
MSLN-203ENST00000561896 SOCS7O14512 581 aa37.48■■■■□ 3.59
MSLN-203ENST00000561896 MYOM2P54296 1465 aa37.45■■■■□ 3.59
MSLN-203ENST00000561896 NRXN1Q9ULB1 1477 aa37.45■■■■□ 3.59
MSLN-203ENST00000561896 TECPR2O15040 1411 aa37.44■■■■□ 3.58
MSLN-203ENST00000561896 ASXL1Q8IXJ9 1541 aa37.44■■■■□ 3.58
MSLN-203ENST00000561896 LRPPRCP42704 1394 aaKnown RBP37.42■■■■□ 3.58
MSLN-203ENST00000561896 ABCC11Q96J66 1382 aa37.4■■■■□ 3.58
MSLN-203ENST00000561896 KNDC1Q76NI1 1749 aa37.39■■■■□ 3.58
MSLN-203ENST00000561896 NHSL1Q5SYE7 1610 aa37.39■■■■□ 3.58
MSLN-203ENST00000561896 LAMC1P11047 1609 aa37.38■■■■□ 3.57
MSLN-203ENST00000561896 C14orf93Q9H972 538 aaKnown RBP37.37■■■■□ 3.57
MSLN-203ENST00000561896 SHPRHQ149N8 1683 aa37.35■■■■□ 3.57
MSLN-203ENST00000561896 C1orf167Q5SNV9 1468 aa37.35■■■■□ 3.57
MSLN-203ENST00000561896 SPATA31A6Q5VVP1 1343 aa37.34■■■■□ 3.57
MSLN-203ENST00000561896 YTHDC2Q9H6S0 1430 aaKnown RBP37.32■■■■□ 3.56
MSLN-203ENST00000561896 CDC42BPGQ6DT37 1551 aa37.32■■■■□ 3.56
MSLN-203ENST00000561896 TMEM132EQ6IEE7 984 aa37.31■■■■□ 3.56
MSLN-203ENST00000561896 STAC3Q96MF2 364 aa37.31■■■■□ 3.56
MSLN-203ENST00000561896 SIRT1Q96EB6 747 aa37.3■■■■□ 3.56
MSLN-203ENST00000561896 RGS17Q9UGC6 210 aaPredicted RBP37.3■■■■□ 3.56
MSLN-203ENST00000561896 STK26Q9P289 416 aa37.29■■■■□ 3.56
Retrieved 100 of 20,778 RNA–protein pairs in 15 ms