RNA–Protein interactions for RNA: ENST00000561106.1

SEMA6D-216, Transcript of semaphorin 6D, humanhuman

TSL 4

Gene SEMA6D, Length 530 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA6D-216ENST00000561106 TRPM2O94759 1503 aa21.45■■□□□ 1.02
SEMA6D-216ENST00000561106 CLTCL1P53675 1640 aa21.45■■□□□ 1.02
SEMA6D-216ENST00000561106 SENP3Q9H4L4 574 aaPredicted RBP21.45■■□□□ 1.02
SEMA6D-216ENST00000561106 ACIN1Q9UKV3 1341 aaKnown RBP21.45■■□□□ 1.02
SEMA6D-216ENST00000561106 HDGFP51858 240 aaKnown RBP21.44■■□□□ 1.02
SEMA6D-216ENST00000561106 SLC26A8Q96RN1 970 aa21.43■■□□□ 1.02
SEMA6D-216ENST00000561106 HRCP23327 699 aa21.42■■□□□ 1.02
SEMA6D-216ENST00000561106 STRCP1A6NGW2 1772 aa21.41■■□□□ 1.02
SEMA6D-216ENST00000561106 ABCF1Q8NE71 845 aaKnown RBP eCLIP21.41■■□□□ 1.02
SEMA6D-216ENST00000561106 PPP1R15AO75807 674 aaPredicted RBP21.4■■□□□ 1.02
SEMA6D-216ENST00000561106 PLEKHG1Q9ULL1 1385 aa21.39■■□□□ 1.02
SEMA6D-216ENST00000561106 ZNF326Q5BKZ1 582 aaKnown RBP21.39■■□□□ 1.01
SEMA6D-216ENST00000561106 BCANQ96GW7 911 aa21.39■■□□□ 1.01
SEMA6D-216ENST00000561106 KIF1BO60333 1816 aa21.39■■□□□ 1.01
SEMA6D-216ENST00000561106 CPS1P31327 1500 aa21.36■■□□□ 1.01
SEMA6D-216ENST00000561106 IQSEC2Q5JU85 1478 aa21.35■■□□□ 1.01
SEMA6D-216ENST00000561106 TBX22Q9Y458 520 aa21.34■■□□□ 1.01
SEMA6D-216ENST00000561106 KCNA6P17658 529 aa21.33■■□□□ 1.01
SEMA6D-216ENST00000561106 ADAMTS13Q76LX8 1427 aa21.32■■□□□ 1
SEMA6D-216ENST00000561106 LRRC7Q96NW7 1537 aa21.31■■□□□ 1
SEMA6D-216ENST00000561106 CCDC144AA2RUR9 1427 aa21.3■■□□□ 1
SEMA6D-216ENST00000561106 NEXMIFQ5QGS0 1516 aa21.3■■□□□ 1
SEMA6D-216ENST00000561106 UBAP1LF5GYI3 381 aa21.28■■□□□ 1
SEMA6D-216ENST00000561106 RGL3Q3MIN7 710 aa21.28■■□□□ 1
SEMA6D-216ENST00000561106 RPGRIP1LQ68CZ1 1315 aa21.28■■□□□ 1
SEMA6D-216ENST00000561106 ANKRD30BQ9BXX2 1392 aa21.27■■□□□ 1
SEMA6D-216ENST00000561106 SPATA31E1Q6ZUB1 1445 aa21.27■■□□□ 1
SEMA6D-216ENST00000561106 CHD2O14647 1828 aaKnown RBP21.27■□□□□ 0.99
SEMA6D-216ENST00000561106 NRXN3Q9Y4C0 1643 aa21.26■□□□□ 0.99
SEMA6D-216ENST00000561106 VGFO15240 615 aaPredicted RBP21.25■□□□□ 0.99
SEMA6D-216ENST00000561106 RBM33Q96EV2 1170 aaKnown RBP21.25■□□□□ 0.99
SEMA6D-216ENST00000561106 XIRP1Q702N8 1843 aaKnown RBP21.25■□□□□ 0.99
SEMA6D-216ENST00000561106 PROSER2Q86WR7 435 aaPredicted RBP21.24■□□□□ 0.99
SEMA6D-216ENST00000561106 PPLO60437 1756 aa21.23■□□□□ 0.99
SEMA6D-216ENST00000561106 SETBP1Q9Y6X0 1596 aa21.23■□□□□ 0.99
SEMA6D-216ENST00000561106 TRIM26Q12899 539 aaPredicted RBP21.21■□□□□ 0.99
SEMA6D-216ENST00000561106 DIP2AQ14689 1571 aa21.21■□□□□ 0.99
SEMA6D-216ENST00000561106 NWD1Q149M9 1564 aa21.21■□□□□ 0.99
SEMA6D-216ENST00000561106 TMEM94Q12767 1356 aa21.21■□□□□ 0.99
SEMA6D-216ENST00000561106 PTPRUQ92729 1446 aa21.21■□□□□ 0.99
SEMA6D-216ENST00000561106 METP08581 1390 aa21.2■□□□□ 0.98
SEMA6D-216ENST00000561106 PIK3R4Q99570 1358 aa21.2■□□□□ 0.98
SEMA6D-216ENST00000561106 TOM1O60784 492 aa21.19■□□□□ 0.98
SEMA6D-216ENST00000561106 AMOTL2Q9Y2J4 779 aa21.19■□□□□ 0.98
SEMA6D-216ENST00000561106 ADGRF5Q8IZF2 1346 aa21.19■□□□□ 0.98
SEMA6D-216ENST00000561106 ALKQ9UM73 1620 aa21.18■□□□□ 0.98
SEMA6D-216ENST00000561106 NKTRP30414 1462 aaKnown RBP21.17■□□□□ 0.98
SEMA6D-216ENST00000561106 PIP4K2BP78356 416 aa21.16■□□□□ 0.98
SEMA6D-216ENST00000561106 IFT172Q9UG01 1749 aa21.15■□□□□ 0.98
SEMA6D-216ENST00000561106 SETD1AO15047 1707 aaKnown RBP21.12■□□□□ 0.97
SEMA6D-216ENST00000561106 SCAF1Q9H7N4 1312 aaKnown RBP21.11■□□□□ 0.97
SEMA6D-216ENST00000561106 XRN1Q8IZH2 1706 aaKnown RBP21.09■□□□□ 0.97
SEMA6D-216ENST00000561106 NCOA3Q9Y6Q9 1424 aa21.07■□□□□ 0.96
SEMA6D-216ENST00000561106 KDM2AQ9Y2K7 1162 aa21.06■□□□□ 0.96
SEMA6D-216ENST00000561106 PIK3C2GO75747 1445 aa21.05■□□□□ 0.96
SEMA6D-216ENST00000561106 TMEM132EQ6IEE7 984 aa21.05■□□□□ 0.96
SEMA6D-216ENST00000561106 C14orf37Q86TY3 774 aa21.05■□□□□ 0.96
SEMA6D-216ENST00000561106 DCAF11Q8TEB1 546 aa21.05■□□□□ 0.96
SEMA6D-216ENST00000561106 C19orf44Q9H6X5 657 aa21.05■□□□□ 0.96
SEMA6D-216ENST00000561106 C14orf93Q9H972 538 aaKnown RBP21.05■□□□□ 0.96
SEMA6D-216ENST00000561106 MSH6P52701 1360 aa21.05■□□□□ 0.96
SEMA6D-216ENST00000561106 DHX57Q6P158 1386 aaKnown RBP21.05■□□□□ 0.96
SEMA6D-216ENST00000561106 HSPA1LP34931 641 aa21.04■□□□□ 0.96
SEMA6D-216ENST00000561106 NRXN1Q9ULB1 1477 aa21.04■□□□□ 0.96
SEMA6D-216ENST00000561106 CFAP70Q5T0N1 1121 aa21.03■□□□□ 0.96
SEMA6D-216ENST00000561106 MYOM2P54296 1465 aa21.02■□□□□ 0.96
SEMA6D-216ENST00000561106 SLAIN2Q9P270 581 aa21.02■□□□□ 0.96
SEMA6D-216ENST00000561106 SIPA1L2Q9P2F8 1722 aaPredicted RBP21.01■□□□□ 0.95
SEMA6D-216ENST00000561106 ROBO2Q9HCK4 1378 aa21.01■□□□□ 0.95
SEMA6D-216ENST00000561106 SIN3AQ96ST3 1273 aa21.01■□□□□ 0.95
SEMA6D-216ENST00000561106 STK26Q9P289 416 aa21■□□□□ 0.95
SEMA6D-216ENST00000561106 ASXL1Q8IXJ9 1541 aa20.99■□□□□ 0.95
SEMA6D-216ENST00000561106 FAM135BQ49AJ0 1406 aa20.98■□□□□ 0.95
SEMA6D-216ENST00000561106 STAC3Q96MF2 364 aa20.98■□□□□ 0.95
SEMA6D-216ENST00000561106 LRPPRCP42704 1394 aaKnown RBP20.97■□□□□ 0.95
SEMA6D-216ENST00000561106 PRAG1Q86YV5 1406 aa20.97■□□□□ 0.95
SEMA6D-216ENST00000561106 ATF3P18847 181 aa20.97■□□□□ 0.95
SEMA6D-216ENST00000561106 CADPS2Q86UW7 1296 aa20.97■□□□□ 0.95
SEMA6D-216ENST00000561106 PTCH1Q13635 1447 aa20.96■□□□□ 0.95
SEMA6D-216ENST00000561106 ABCC11Q96J66 1382 aa20.96■□□□□ 0.95
SEMA6D-216ENST00000561106 WAPLQ7Z5K2 1190 aa20.95■□□□□ 0.94
SEMA6D-216ENST00000561106 NEUROD1Q13562 356 aa20.94■□□□□ 0.94
SEMA6D-216ENST00000561106 YTHDC2Q9H6S0 1430 aaKnown RBP20.94■□□□□ 0.94
SEMA6D-216ENST00000561106 ADGRL3Q9HAR2 1447 aa20.94■□□□□ 0.94
SEMA6D-216ENST00000561106 TECPR2O15040 1411 aa20.93■□□□□ 0.94
SEMA6D-216ENST00000561106 ROBO1Q9Y6N7 1651 aa20.92■□□□□ 0.94
SEMA6D-216ENST00000561106 NALCNQ8IZF0 1738 aa20.91■□□□□ 0.94
SEMA6D-216ENST00000561106 L3MBTL2Q969R5 705 aa20.91■□□□□ 0.94
SEMA6D-216ENST00000561106 DCCP43146 1447 aa20.9■□□□□ 0.94
SEMA6D-216ENST00000561106 PLEKHH1Q9ULM0 1364 aa20.9■□□□□ 0.94
SEMA6D-216ENST00000561106 SIRT1Q96EB6 747 aa20.9■□□□□ 0.94
SEMA6D-216ENST00000561106 PCGF6Q9BYE7 350 aa20.9■□□□□ 0.94
SEMA6D-216ENST00000561106 LAMC1P11047 1609 aa20.89■□□□□ 0.94
SEMA6D-216ENST00000561106 ADGRB1O14514 1584 aa20.88■□□□□ 0.93
SEMA6D-216ENST00000561106 MST1RQ04912 1400 aa20.87■□□□□ 0.93
SEMA6D-216ENST00000561106 KNDC1Q76NI1 1749 aa20.87■□□□□ 0.93
SEMA6D-216ENST00000561106 BRINP3Q76B58 766 aa20.86■□□□□ 0.93
SEMA6D-216ENST00000561106 SOCS7O14512 581 aa20.85■□□□□ 0.93
SEMA6D-216ENST00000561106 TRAK1Q9UPV9 953 aa20.85■□□□□ 0.93
SEMA6D-216ENST00000561106 NBPF1Q3BBV0 1214 aa20.83■□□□□ 0.93
Retrieved 100 of 20,778 RNA–protein pairs in 34.1 ms