RNA–Protein interactions for RNA: ENST00000560420.1

PSME1-207, Transcript of proteasome activator subunit 1, humanhuman

TSL 2

Gene PSME1, Length 922 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSME1-207ENST00000560420 NWD1Q149M9 1564 aa22.09■■□□□ 1.13
PSME1-207ENST00000560420 ADAMTS13Q76LX8 1427 aa22.06■■□□□ 1.12
PSME1-207ENST00000560420 SETD5Q9C0A6 1442 aa22.06■■□□□ 1.12
PSME1-207ENST00000560420 XIRP1Q702N8 1843 aaKnown RBP22.05■■□□□ 1.12
PSME1-207ENST00000560420 TRIM52Q96A61 297 aa22.04■■□□□ 1.12
PSME1-207ENST00000560420 NRXN3Q9Y4C0 1643 aa22.03■■□□□ 1.12
PSME1-207ENST00000560420 NEXMIFQ5QGS0 1516 aa22.03■■□□□ 1.12
PSME1-207ENST00000560420 SLC4A1APQ9BWU0 796 aaKnown RBP22.03■■□□□ 1.12
PSME1-207ENST00000560420 DIP2AQ14689 1571 aa22.03■■□□□ 1.12
PSME1-207ENST00000560420 ABCF1Q8NE71 845 aaKnown RBP eCLIP22.02■■□□□ 1.12
PSME1-207ENST00000560420 SLC26A8Q96RN1 970 aa22.01■■□□□ 1.11
PSME1-207ENST00000560420 NKTRP30414 1462 aaKnown RBP22.01■■□□□ 1.11
PSME1-207ENST00000560420 SETBP1Q9Y6X0 1596 aa22■■□□□ 1.11
PSME1-207ENST00000560420 CHGAP10645 457 aaKnown RBP22■■□□□ 1.11
PSME1-207ENST00000560420 RAB3GAP2Q9H2M9 1393 aa21.99■■□□□ 1.11
PSME1-207ENST00000560420 CHD2O14647 1828 aaKnown RBP21.99■■□□□ 1.11
PSME1-207ENST00000560420 KIF1BO60333 1816 aa21.99■■□□□ 1.11
PSME1-207ENST00000560420 KCNA6P17658 529 aa21.99■■□□□ 1.11
PSME1-207ENST00000560420 HDGFP51858 240 aaKnown RBP21.99■■□□□ 1.11
PSME1-207ENST00000560420 TBX22Q9Y458 520 aa21.98■■□□□ 1.11
PSME1-207ENST00000560420 ACIN1Q9UKV3 1341 aaKnown RBP21.98■■□□□ 1.11
PSME1-207ENST00000560420 UBAP1LF5GYI3 381 aa21.97■■□□□ 1.11
PSME1-207ENST00000560420 MPHOSPH9Q99550 1183 aa21.97■■□□□ 1.11
PSME1-207ENST00000560420 PPP1R15AO75807 674 aaPredicted RBP21.95■■□□□ 1.1
PSME1-207ENST00000560420 FOXD1Q16676 465 aa21.94■■□□□ 1.1
PSME1-207ENST00000560420 PIK3R4Q99570 1358 aa21.94■■□□□ 1.1
PSME1-207ENST00000560420 NUTM2DQ5VT03 806 aaPredicted RBP21.93■■□□□ 1.1
PSME1-207ENST00000560420 SPATA31E1Q6ZUB1 1445 aa21.93■■□□□ 1.1
PSME1-207ENST00000560420 TMEM94Q12767 1356 aa21.92■■□□□ 1.1
PSME1-207ENST00000560420 PTPRUQ92729 1446 aa21.9■■□□□ 1.1
PSME1-207ENST00000560420 PPLO60437 1756 aa21.9■■□□□ 1.1
PSME1-207ENST00000560420 SETD1AO15047 1707 aaKnown RBP21.9■■□□□ 1.1
PSME1-207ENST00000560420 XRN1Q8IZH2 1706 aaKnown RBP21.9■■□□□ 1.1
PSME1-207ENST00000560420 TOM1O60784 492 aa21.89■■□□□ 1.09
PSME1-207ENST00000560420 HRCP23327 699 aa21.89■■□□□ 1.09
PSME1-207ENST00000560420 CCDC144AA2RUR9 1427 aa21.89■■□□□ 1.09
PSME1-207ENST00000560420 IFT172Q9UG01 1749 aa21.86■■□□□ 1.09
PSME1-207ENST00000560420 RPGRIP1LQ68CZ1 1315 aa21.86■■□□□ 1.09
PSME1-207ENST00000560420 ZNF326Q5BKZ1 582 aaKnown RBP21.86■■□□□ 1.09
PSME1-207ENST00000560420 SENP3Q9H4L4 574 aaPredicted RBP21.86■■□□□ 1.09
PSME1-207ENST00000560420 BCANQ96GW7 911 aa21.85■■□□□ 1.09
PSME1-207ENST00000560420 NCOA3Q9Y6Q9 1424 aa21.85■■□□□ 1.09
PSME1-207ENST00000560420 METP08581 1390 aa21.84■■□□□ 1.09
PSME1-207ENST00000560420 PRAG1Q86YV5 1406 aa21.83■■□□□ 1.09
PSME1-207ENST00000560420 PROSER2Q86WR7 435 aaPredicted RBP21.82■■□□□ 1.08
PSME1-207ENST00000560420 ANKRD30BQ9BXX2 1392 aa21.8■■□□□ 1.08
PSME1-207ENST00000560420 VGFO15240 615 aaPredicted RBP21.79■■□□□ 1.08
PSME1-207ENST00000560420 PIP4K2BP78356 416 aa21.79■■□□□ 1.08
PSME1-207ENST00000560420 RBM33Q96EV2 1170 aaKnown RBP21.79■■□□□ 1.08
PSME1-207ENST00000560420 AMOTL2Q9Y2J4 779 aa21.77■■□□□ 1.08
PSME1-207ENST00000560420 FAM135BQ49AJ0 1406 aa21.77■■□□□ 1.08
PSME1-207ENST00000560420 HSPA1LP34931 641 aa21.76■■□□□ 1.07
PSME1-207ENST00000560420 NRXN1Q9ULB1 1477 aa21.76■■□□□ 1.07
PSME1-207ENST00000560420 MSH6P52701 1360 aa21.75■■□□□ 1.07
PSME1-207ENST00000560420 SIPA1L2Q9P2F8 1722 aaPredicted RBP21.75■■□□□ 1.07
PSME1-207ENST00000560420 PIK3C2GO75747 1445 aa21.74■■□□□ 1.07
PSME1-207ENST00000560420 PTCH1Q13635 1447 aa21.74■■□□□ 1.07
PSME1-207ENST00000560420 ADGRF5Q8IZF2 1346 aa21.74■■□□□ 1.07
PSME1-207ENST00000560420 ASXL1Q8IXJ9 1541 aa21.73■■□□□ 1.07
PSME1-207ENST00000560420 MYOM2P54296 1465 aa21.72■■□□□ 1.07
PSME1-207ENST00000560420 ROBO1Q9Y6N7 1651 aa21.72■■□□□ 1.07
PSME1-207ENST00000560420 DCCP43146 1447 aa21.72■■□□□ 1.07
PSME1-207ENST00000560420 SCAF1Q9H7N4 1312 aaKnown RBP21.71■■□□□ 1.07
PSME1-207ENST00000560420 RGL3Q3MIN7 710 aa21.69■■□□□ 1.06
PSME1-207ENST00000560420 NALCNQ8IZF0 1738 aa21.69■■□□□ 1.06
PSME1-207ENST00000560420 TECPR2O15040 1411 aa21.67■■□□□ 1.06
PSME1-207ENST00000560420 ADGRL3Q9HAR2 1447 aa21.67■■□□□ 1.06
PSME1-207ENST00000560420 ROBO2Q9HCK4 1378 aa21.67■■□□□ 1.06
PSME1-207ENST00000560420 C19orf44Q9H6X5 657 aa21.67■■□□□ 1.06
PSME1-207ENST00000560420 SLAIN2Q9P270 581 aa21.65■■□□□ 1.06
PSME1-207ENST00000560420 KNDC1Q76NI1 1749 aa21.64■■□□□ 1.06
PSME1-207ENST00000560420 LAMC1P11047 1609 aa21.62■■□□□ 1.05
PSME1-207ENST00000560420 CADPS2Q86UW7 1296 aa21.62■■□□□ 1.05
PSME1-207ENST00000560420 MST1RQ04912 1400 aa21.62■■□□□ 1.05
PSME1-207ENST00000560420 LRPPRCP42704 1394 aaKnown RBP21.61■■□□□ 1.05
PSME1-207ENST00000560420 MED1Q15648 1581 aaPredicted RBP21.61■■□□□ 1.05
PSME1-207ENST00000560420 AHDC1Q5TGY3 1603 aaPredicted RBP21.6■■□□□ 1.05
PSME1-207ENST00000560420 DHX57Q6P158 1386 aaKnown RBP21.6■■□□□ 1.05
PSME1-207ENST00000560420 ABCC11Q96J66 1382 aa21.6■■□□□ 1.05
PSME1-207ENST00000560420 C14orf93Q9H972 538 aaKnown RBP21.59■■□□□ 1.05
PSME1-207ENST00000560420 COL16A1Q07092 1604 aaPredicted RBP21.58■■□□□ 1.05
PSME1-207ENST00000560420 ADGRB1O14514 1584 aa21.57■■□□□ 1.04
PSME1-207ENST00000560420 C14orf37Q86TY3 774 aa21.57■■□□□ 1.04
PSME1-207ENST00000560420 ATF3P18847 181 aa21.56■■□□□ 1.04
PSME1-207ENST00000560420 YTHDC2Q9H6S0 1430 aaKnown RBP21.55■■□□□ 1.04
PSME1-207ENST00000560420 CDC42BPGQ6DT37 1551 aa21.55■■□□□ 1.04
PSME1-207ENST00000560420 PHLPP1O60346 1717 aa21.55■■□□□ 1.04
PSME1-207ENST00000560420 DISP3Q9P2K9 1392 aa21.54■■□□□ 1.04
PSME1-207ENST00000560420 BRINP3Q76B58 766 aa21.53■■□□□ 1.04
PSME1-207ENST00000560420 NHSL1Q5SYE7 1610 aa21.53■■□□□ 1.04
PSME1-207ENST00000560420 CFAP70Q5T0N1 1121 aa21.52■■□□□ 1.04
PSME1-207ENST00000560420 TMEM132EQ6IEE7 984 aa21.52■■□□□ 1.04
PSME1-207ENST00000560420 STAC3Q96MF2 364 aa21.52■■□□□ 1.04
PSME1-207ENST00000560420 DLC1Q96QB1 1528 aa21.51■■□□□ 1.03
PSME1-207ENST00000560420 C1orf167Q5SNV9 1468 aa21.51■■□□□ 1.03
PSME1-207ENST00000560420 PLEKHH1Q9ULM0 1364 aa21.5■■□□□ 1.03
PSME1-207ENST00000560420 SIRT1Q96EB6 747 aa21.5■■□□□ 1.03
PSME1-207ENST00000560420 WAPLQ7Z5K2 1190 aa21.46■■□□□ 1.03
PSME1-207ENST00000560420 DCAF11Q8TEB1 546 aa21.46■■□□□ 1.03
PSME1-207ENST00000560420 STK26Q9P289 416 aa21.45■■□□□ 1.02
Retrieved 100 of 20,778 RNA–protein pairs in 12.3 ms