RNA–Protein interactions for RNA: ENST00000559077.1

RNF111-204, Transcript of ring finger protein 111, human

TSL 5

Gene RNF111, Length 472 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
RNF111-204	ENST00000559077	SAMD7	Q7Z3H4	446 aa		13.79	□□□□□ -0.2
RNF111-204	ENST00000559077	TSKS	Q9UJT2	592 aa		13.79	□□□□□ -0.2
RNF111-204	ENST00000559077	POLA1	P09884	1462 aa	Predicted RBP	13.79	□□□□□ -0.2
RNF111-204	ENST00000559077	LCE2B	O14633	110 aa		13.78	□□□□□ -0.2
RNF111-204	ENST00000559077	NRG2	O14511	850 aa	Predicted RBP	13.77	□□□□□ -0.21
RNF111-204	ENST00000559077	IFT140	Q96RY7	1462 aa		13.77	□□□□□ -0.21
RNF111-204	ENST00000559077	SLC24A1	O60721	1099 aa		13.76	□□□□□ -0.21
RNF111-204	ENST00000559077	TJAP1	Q5JTD0	557 aa		13.76	□□□□□ -0.21
RNF111-204	ENST00000559077	MTR	Q99707	1265 aa		13.76	□□□□□ -0.21
RNF111-204	ENST00000559077	ABCA10	Q8WWZ4	1543 aa		13.75	□□□□□ -0.21
RNF111-204	ENST00000559077	CUX2	O14529	1486 aa		13.75	□□□□□ -0.21
RNF111-204	ENST00000559077	SOGA1	O94964	1423 aa		13.75	□□□□□ -0.21
RNF111-204	ENST00000559077	EN1	Q05925	392 aa	Predicted RBP	13.75	□□□□□ -0.21
RNF111-204	ENST00000559077	IL21	Q9HBE4	155 aa		13.75	□□□□□ -0.21
RNF111-204	ENST00000559077	PPP1R18	Q6NYC8	613 aa		13.74	□□□□□ -0.21
RNF111-204	ENST00000559077	KIF27	Q86VH2	1401 aa		13.73	□□□□□ -0.21
RNF111-204	ENST00000559077	CDCA7L	Q96GN5	454 aa		13.71	□□□□□ -0.21
RNF111-204	ENST00000559077	HDGF	P51858	240 aa	Known RBP	13.7	□□□□□ -0.22
RNF111-204	ENST00000559077	TARBP1	Q13395	1621 aa	Known RBP	13.69	□□□□□ -0.22
RNF111-204	ENST00000559077	ZNF787	Q6DD87	383 aa		13.69	□□□□□ -0.22
RNF111-204	ENST00000559077	PNMA3	Q9UL41	463 aa		13.69	□□□□□ -0.22
RNF111-204	ENST00000559077	PDZRN3	Q9UPQ7	1066 aa		13.69	□□□□□ -0.22
RNF111-204	ENST00000559077		V9GY48	417 aa	Predicted RBP	13.69	□□□□□ -0.22
RNF111-204	ENST00000559077	NBPF26	B4DH59	902 aa		13.68	□□□□□ -0.22
RNF111-204	ENST00000559077	PRSS12	P56730	875 aa		13.68	□□□□□ -0.22
RNF111-204	ENST00000559077	EIF4ENIF1	Q9NRA8	985 aa	Known RBP	13.68	□□□□□ -0.22
RNF111-204	ENST00000559077	ZNF516	Q92618	1163 aa		13.67	□□□□□ -0.22
RNF111-204	ENST00000559077	RAD54L2	Q9Y4B4	1467 aa		13.64	□□□□□ -0.23
RNF111-204	ENST00000559077	TATDN2	Q93075	761 aa		13.64	□□□□□ -0.23
RNF111-204	ENST00000559077	ABCA5	Q8WWZ7	1642 aa		13.64	□□□□□ -0.23
RNF111-204	ENST00000559077	GGCX	P38435	758 aa		13.63	□□□□□ -0.23
RNF111-204	ENST00000559077	ERICH3	Q5RHP9	1530 aa		13.63	□□□□□ -0.23
RNF111-204	ENST00000559077	GRXCR2	A6NFK2	248 aa		13.62	□□□□□ -0.23
RNF111-204	ENST00000559077	GAPVD1	Q14C86	1478 aa		13.61	□□□□□ -0.23
RNF111-204	ENST00000559077	PDIA6	Q15084	440 aa		13.61	□□□□□ -0.23
RNF111-204	ENST00000559077	CERK	Q8TCT0	537 aa		13.61	□□□□□ -0.23
RNF111-204	ENST00000559077	FAM198A	Q9UFP1	575 aa		13.61	□□□□□ -0.23
RNF111-204	ENST00000559077	COPS2	P61201	443 aa		13.6	□□□□□ -0.23
RNF111-204	ENST00000559077	NKX2-3	Q8TAU0	364 aa		13.6	□□□□□ -0.23
RNF111-204	ENST00000559077	APLP1	P51693	650 aa		13.59	□□□□□ -0.23
RNF111-204	ENST00000559077	GRIN2B	Q13224	1484 aa		13.59	□□□□□ -0.23
RNF111-204	ENST00000559077	CUL7	Q14999	1698 aa		13.59	□□□□□ -0.23
RNF111-204	ENST00000559077	SPDYE16	A6NNV3	312 aa	Predicted RBP	13.58	□□□□□ -0.24
RNF111-204	ENST00000559077	NUDT18	Q6ZVK8	323 aa		13.58	□□□□□ -0.24
RNF111-204	ENST00000559077	C3orf80	F5H4A9	247 aa		13.57	□□□□□ -0.24
RNF111-204	ENST00000559077	E2F4	Q16254	413 aa		13.57	□□□□□ -0.24
RNF111-204	ENST00000559077	TSHZ2	Q9NRE2	1034 aa		13.57	□□□□□ -0.24
RNF111-204	ENST00000559077	EIF4G3	O43432	1585 aa	Known RBP	13.56	□□□□□ -0.24
RNF111-204	ENST00000559077	KIF21B	O75037	1637 aa		13.56	□□□□□ -0.24
RNF111-204	ENST00000559077	IGF1R	P08069	1367 aa		13.55	□□□□□ -0.24
RNF111-204	ENST00000559077	TDRD9	Q8NDG6	1382 aa	Known RBP	13.55	□□□□□ -0.24
RNF111-204	ENST00000559077	MAGI1	Q96QZ7	1491 aa	Predicted RBP	13.55	□□□□□ -0.24
RNF111-204	ENST00000559077	NECTIN2	Q92692	538 aa		13.54	□□□□□ -0.24
RNF111-204	ENST00000559077	PRX	Q9BXM0	1461 aa		13.54	□□□□□ -0.24
RNF111-204	ENST00000559077	PBRM1	Q86U86	1689 aa		13.53	□□□□□ -0.24
RNF111-204	ENST00000559077	SLC4A3	P48751	1232 aa		13.53	□□□□□ -0.24
RNF111-204	ENST00000559077	ZNF775	Q96BV0	537 aa	Predicted RBP	13.52	□□□□□ -0.25
RNF111-204	ENST00000559077	WDR70	Q9NW82	654 aa		13.52	□□□□□ -0.25
RNF111-204	ENST00000559077	RUSC2	Q8N2Y8	1516 aa		13.52	□□□□□ -0.25
RNF111-204	ENST00000559077	ZNF608	Q9ULD9	1512 aa	Predicted RBP	13.52	□□□□□ -0.25
RNF111-204	ENST00000559077	FHAD1	B1AJZ9	1412 aa		13.51	□□□□□ -0.25
RNF111-204	ENST00000559077	CDHR5	Q9HBB8	845 aa		13.51	□□□□□ -0.25
RNF111-204	ENST00000559077	AQR	O60306	1485 aa	Known RBP eCLIP	13.5	□□□□□ -0.25	6e-13	■■■□□ 16.6
RNF111-204	ENST00000559077	GOLGA3	Q08378	1498 aa		13.5	□□□□□ -0.25
RNF111-204	ENST00000559077	CARMIL1	Q5VZK9	1371 aa		13.5	□□□□□ -0.25
RNF111-204	ENST00000559077	PRIM1	P49642	420 aa	Known RBP	13.5	□□□□□ -0.25
RNF111-204	ENST00000559077	ARIH1	Q9Y4X5	557 aa	Predicted RBP	13.5	□□□□□ -0.25
RNF111-204	ENST00000559077	RAPGEF2	Q9Y4G8	1499 aa		13.49	□□□□□ -0.25
RNF111-204	ENST00000559077	SWT1	Q5T5J6	900 aa	Known RBP	13.49	□□□□□ -0.25
RNF111-204	ENST00000559077	SLF2	Q8IX21	1173 aa		13.49	□□□□□ -0.25
RNF111-204	ENST00000559077	ADAMTS12	P58397	1594 aa		13.47	□□□□□ -0.25
RNF111-204	ENST00000559077	FAM9A	Q8IZU1	332 aa	Predicted RBP	13.47	□□□□□ -0.25
RNF111-204	ENST00000559077	PKDCC	Q504Y2	493 aa		13.46	□□□□□ -0.25
RNF111-204	ENST00000559077	SYNJ2	O15056	1496 aa		13.45	□□□□□ -0.26
RNF111-204	ENST00000559077	SNAPC4	Q5SXM2	1469 aa		13.45	□□□□□ -0.26
RNF111-204	ENST00000559077	TMUB1	Q9BVT8	246 aa		13.45	□□□□□ -0.26
RNF111-204	ENST00000559077	ZPR1	O75312	459 aa		13.43	□□□□□ -0.26
RNF111-204	ENST00000559077	SLC19A1	P41440	591 aa		13.43	□□□□□ -0.26
RNF111-204	ENST00000559077	PADI6	Q6TGC4	694 aa		13.42	□□□□□ -0.26
RNF111-204	ENST00000559077	PCDHB3	Q9Y5E6	796 aa		13.42	□□□□□ -0.26
RNF111-204	ENST00000559077	RBM27	Q9P2N5	1060 aa	Known RBP	13.41	□□□□□ -0.26
RNF111-204	ENST00000559077	TNIK	Q9UKE5	1360 aa		13.41	□□□□□ -0.26
RNF111-204	ENST00000559077	PRR14	Q9BWN1	585 aa		13.39	□□□□□ -0.27
RNF111-204	ENST00000559077	GRIN2A	Q12879	1464 aa		13.39	□□□□□ -0.27
RNF111-204	ENST00000559077	OSBP	P22059	807 aa		13.38	□□□□□ -0.27
RNF111-204	ENST00000559077	RNF223	E7ERA6	249 aa		13.37	□□□□□ -0.27
RNF111-204	ENST00000559077	CHMP7	Q8WUX9	453 aa	Predicted RBP	13.37	□□□□□ -0.27
RNF111-204	ENST00000559077	UBTF	P17480	764 aa	Known RBP	13.36	□□□□□ -0.27
RNF111-204	ENST00000559077	KCNV2	Q8TDN2	545 aa		13.36	□□□□□ -0.27
RNF111-204	ENST00000559077	BLOC1S3	Q6QNY0	202 aa		13.35	□□□□□ -0.27
RNF111-204	ENST00000559077	TRIM67	Q6ZTA4	783 aa		13.34	□□□□□ -0.27
RNF111-204	ENST00000559077	FAM187A	A6NFU0	413 aa		13.33	□□□□□ -0.28
RNF111-204	ENST00000559077	TLL1	O43897	1013 aa		13.33	□□□□□ -0.28
RNF111-204	ENST00000559077	MYT1	Q01538	1121 aa		13.33	□□□□□ -0.28
RNF111-204	ENST00000559077	CTTNBP2	Q8WZ74	1663 aa		13.33	□□□□□ -0.28
RNF111-204	ENST00000559077	NUP160	Q12769	1436 aa		13.32	□□□□□ -0.28
RNF111-204	ENST00000559077	DGAT1	O75907	488 aa		13.32	□□□□□ -0.28
RNF111-204	ENST00000559077	KIAA0586	Q9BVV6	1533 aa		13.32	□□□□□ -0.28
RNF111-204	ENST00000559077	SPRYD7	Q5W111	196 aa		13.31	□□□□□ -0.28
RNF111-204	ENST00000559077	TNFRSF10A	O00220	468 aa		13.3	□□□□□ -0.28

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