RNA–Protein interactions for RNA: ENST00000559077.1

RNF111-204, Transcript of ring finger protein 111, humanhuman

TSL 5

Gene RNF111, Length 472 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF111-204ENST00000559077 AEBP2Q6ZN18 517 aaPredicted RBP35.76■■■■□ 3.32
RNF111-204ENST00000559077 CHIC1Q5VXU3 224 aa33.56■■■□□ 2.96
RNF111-204ENST00000559077 SENP3Q9H4L4 574 aaPredicted RBP30.67■■■□□ 2.5
RNF111-204ENST00000559077 PHF23Q9BUL5 403 aaPredicted RBP30.2■■■□□ 2.43
RNF111-204ENST00000559077 FOXD1Q16676 465 aa28.59■■■□□ 2.17
RNF111-204ENST00000559077 POTEDQ86YR6 584 aa27.04■■□□□ 1.92
RNF111-204ENST00000559077 MSH5O43196 834 aa26.98■■□□□ 1.91
RNF111-204ENST00000559077 PIAS4Q8N2W9 510 aaPredicted RBP26.74■■□□□ 1.87
RNF111-204ENST00000559077 PLPPR3Q6T4P5 718 aa26.69■■□□□ 1.86
RNF111-204ENST00000559077 PPP6R1Q9UPN7 881 aa26.37■■□□□ 1.81
RNF111-204ENST00000559077 ADRA2BP18089 450 aa26.36■■□□□ 1.81
RNF111-204ENST00000559077 MAPK8IP2Q13387 824 aaPredicted RBP24.33■■□□□ 1.49
RNF111-204ENST00000559077 DMRT2Q9Y5R5 561 aa24.19■■□□□ 1.46
RNF111-204ENST00000559077 SCAF1Q9H7N4 1312 aaKnown RBP24.16■■□□□ 1.46
RNF111-204ENST00000559077 DCAF8L1A6NGE4 600 aa23.54■■□□□ 1.36
RNF111-204ENST00000559077 CACNB1Q02641 598 aaPredicted RBP23.53■■□□□ 1.36
RNF111-204ENST00000559077 PPP4R3CPQ6ZMV5 832 aa23.34■■□□□ 1.33
RNF111-204ENST00000559077 HOXD11P31277 338 aaPredicted RBP23.07■■□□□ 1.28
RNF111-204ENST00000559077 CNKSR2Q8WXI2 1034 aa22.98■■□□□ 1.27
RNF111-204ENST00000559077 RNF39Q9H2S5 420 aa22.91■■□□□ 1.26
RNF111-204ENST00000559077 RNF216Q9NWF9 866 aaPredicted RBP22.85■■□□□ 1.25
RNF111-204ENST00000559077 C1QBPQ07021 282 aaKnown RBP22.58■■□□□ 1.21
RNF111-204ENST00000559077 NCBP3Q53F19 620 aaKnown RBP22.38■■□□□ 1.17
RNF111-204ENST00000559077 DNAJC5BQ9UF47 199 aa22.27■■□□□ 1.16
RNF111-204ENST00000559077 GRWD1Q9BQ67 446 aaKnown RBP eCLIP22.23■■□□□ 1.15
RNF111-204ENST00000559077 NPM3O75607 178 aaKnown RBP21.96■■□□□ 1.11
RNF111-204ENST00000559077 U3KPZ7 1027 aaPredicted RBP21.56■■□□□ 1.04
RNF111-204ENST00000559077 CAPN15O75808 1086 aa21.55■■□□□ 1.04
RNF111-204ENST00000559077 SPINK5Q9NQ38 1064 aaPredicted RBP21.43■■□□□ 1.02
RNF111-204ENST00000559077 DSG3P32926 999 aa21.33■■□□□ 1.01
RNF111-204ENST00000559077 KCNA4P22459 653 aa21.19■□□□□ 0.98
RNF111-204ENST00000559077 POTEHQ6S545 545 aa21.15■□□□□ 0.98
RNF111-204ENST00000559077 TRHP20396 242 aaPredicted RBP21.1■□□□□ 0.97
RNF111-204ENST00000559077 SLC4A2P04920 1241 aa21.03■□□□□ 0.96
RNF111-204ENST00000559077 APLP2Q06481 763 aa21.03■□□□□ 0.96
RNF111-204ENST00000559077 ABCB7O75027 752 aa20.99■□□□□ 0.95
RNF111-204ENST00000559077 ZNF219Q9P2Y4 722 aaPredicted RBP20.94■□□□□ 0.94
RNF111-204ENST00000559077 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP20.88■□□□□ 0.93
RNF111-204ENST00000559077 HNRNPUL2Q1KMD3 747 aaKnown RBP20.88■□□□□ 0.93
RNF111-204ENST00000559077 SAMD1Q6SPF0 538 aaPredicted RBP20.72■□□□□ 0.91
RNF111-204ENST00000559077 RBM42Q9BTD8 480 aaKnown RBP20.46■□□□□ 0.87
RNF111-204ENST00000559077 MYCNP04198 464 aaPredicted RBP20.37■□□□□ 0.85
RNF111-204ENST00000559077 POLA2Q14181 598 aa20.34■□□□□ 0.85
RNF111-204ENST00000559077 CHRDL2Q6WN34 429 aa20.17■□□□□ 0.82
RNF111-204ENST00000559077 SLC4A1APQ9BWU0 796 aaKnown RBP19.98■□□□□ 0.79
RNF111-204ENST00000559077 FOXD4L1Q9NU39 408 aa19.91■□□□□ 0.78
RNF111-204ENST00000559077 ZBTB12Q9Y330 459 aaPredicted RBP19.88■□□□□ 0.77
RNF111-204ENST00000559077 ATF5Q9Y2D1 282 aaPredicted RBP19.87■□□□□ 0.77
RNF111-204ENST00000559077 AKT1S1Q96B36 256 aa19.84■□□□□ 0.77
RNF111-204ENST00000559077 OSCARQ8IYS5 282 aa19.73■□□□□ 0.75
RNF111-204ENST00000559077 REM2Q8IYK8 340 aaPredicted RBP19.67■□□□□ 0.74
RNF111-204ENST00000559077 SP7Q8TDD2 431 aaPredicted RBP19.61■□□□□ 0.73
RNF111-204ENST00000559077 PIP4P2Q8N4L2 257 aa19.56■□□□□ 0.72
RNF111-204ENST00000559077 PITPNM1O00562 1244 aa19.48■□□□□ 0.71
RNF111-204ENST00000559077 HAX1O00165 279 aa19.47■□□□□ 0.71
RNF111-204ENST00000559077 ZBTB22O15209 634 aa19.39■□□□□ 0.69
RNF111-204ENST00000559077 NISCHQ9Y2I1 1504 aa19.31■□□□□ 0.68
RNF111-204ENST00000559077 FXR2P51116 673 aaKnown RBP eCLIP19.3■□□□□ 0.68
RNF111-204ENST00000559077 FBLN2P98095 1184 aa19.28■□□□□ 0.68
RNF111-204ENST00000559077 ATXN8OSP0DMR3 200 aa19.25■□□□□ 0.67
RNF111-204ENST00000559077 SPDYE2BA6NHP3 402 aa19.2■□□□□ 0.66
RNF111-204ENST00000559077 SPDYE6P0CI01 402 aa19.2■□□□□ 0.66
RNF111-204ENST00000559077 SPDYE2Q495Y8 402 aa19.2■□□□□ 0.66
RNF111-204ENST00000559077 CLEC11AQ9Y240 323 aa19.14■□□□□ 0.65
RNF111-204ENST00000559077 PRKAR2AP13861 404 aaKnown RBP19.03■□□□□ 0.64
RNF111-204ENST00000559077 SPDYE1Q8NFV5 336 aaPredicted RBP19.03■□□□□ 0.64
RNF111-204ENST00000559077 EVX2Q03828 476 aa19.01■□□□□ 0.63
RNF111-204ENST00000559077 ZNF692Q9BU19 519 aaPredicted RBP18.99■□□□□ 0.63
RNF111-204ENST00000559077 MKRN4PQ13434 485 aaPredicted RBP18.91■□□□□ 0.62
RNF111-204ENST00000559077 SSUH2Q9Y2M2 353 aa18.81■□□□□ 0.6
RNF111-204ENST00000559077 CHADLQ6NUI6 762 aa18.74■□□□□ 0.59
RNF111-204ENST00000559077 C19orf67A6NJJ6 358 aa18.72■□□□□ 0.59
RNF111-204ENST00000559077 PRR29P0C7W0 189 aa18.69■□□□□ 0.58
RNF111-204ENST00000559077 PABPN1Q86U42 306 aaKnown RBP eCLIP18.68■□□□□ 0.58
RNF111-204ENST00000559077 GABBR2O75899 941 aa18.61■□□□□ 0.57
RNF111-204ENST00000559077 CSRNP3Q8WYN3 585 aa18.58■□□□□ 0.56
RNF111-204ENST00000559077 EHMT2Q96KQ7 1210 aa18.49■□□□□ 0.55
RNF111-204ENST00000559077 LHX8Q68G74 356 aa18.43■□□□□ 0.54
RNF111-204ENST00000559077 CD44P16070 742 aaKnown RBP18.41■□□□□ 0.54
RNF111-204ENST00000559077 FARP1Q9Y4F1 1045 aaPredicted RBP18.35■□□□□ 0.53
RNF111-204ENST00000559077 DCBLD2Q96PD2 775 aa18.16■□□□□ 0.5
RNF111-204ENST00000559077 POTEIP0CG38 1075 aa18.13■□□□□ 0.49
RNF111-204ENST00000559077 CLCN6P51797 869 aa18.1■□□□□ 0.49
RNF111-204ENST00000559077 ZRANB1Q9UGI0 708 aa18.1■□□□□ 0.49
RNF111-204ENST00000559077 STAG3Q9UJ98 1225 aa18.05■□□□□ 0.48
RNF111-204ENST00000559077 ZNF579Q8NAF0 562 aaKnown RBP18■□□□□ 0.47
RNF111-204ENST00000559077 CREBZFQ9NS37 354 aa17.99■□□□□ 0.47
RNF111-204ENST00000559077 PAK3O75914 559 aaPredicted RBP17.93■□□□□ 0.46
RNF111-204ENST00000559077 SPDYE4A6NLX3 237 aa17.92■□□□□ 0.46
RNF111-204ENST00000559077 GALR2O43603 387 aaPredicted RBP17.86■□□□□ 0.45
RNF111-204ENST00000559077 PHF12Q96QT6 1004 aa17.79■□□□□ 0.44
RNF111-204ENST00000559077 PLSCR2Q9NRY7 297 aa17.79■□□□□ 0.44
RNF111-204ENST00000559077 NPM1P06748 294 aaKnown RBP eCLIP17.77■□□□□ 0.44
RNF111-204ENST00000559077 OTUD5Q96G74 571 aa17.59■□□□□ 0.41
RNF111-204ENST00000559077 POTEB2H3BUK9 544 aa17.54■□□□□ 0.4
RNF111-204ENST00000559077 MNX1P50219 401 aaPredicted RBP17.53■□□□□ 0.4
RNF111-204ENST00000559077 MS4A3Q96HJ5 214 aa17.51■□□□□ 0.39
RNF111-204ENST00000559077 PELP1Q8IZL8 1130 aaKnown RBP17.5■□□□□ 0.39
RNF111-204ENST00000559077 TSPYL2Q9H2G4 693 aaPredicted RBP17.49■□□□□ 0.39
RNF111-204ENST00000559077 METRNQ9UJH8 293 aa17.46■□□□□ 0.39
Retrieved 100 of 20,778 RNA–protein pairs in 9.5 ms