RNA–Protein interactions for RNA: ENST00000558440.5

ZEB1-211, Transcript of zinc finger E-box binding homeobox 1, humanhuman

TSL 1 (best)

Gene ZEB1, Length 886 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZEB1-211ENST00000558440 CLASP1Q7Z460 1538 aa11.09□□□□□ -0.63
ZEB1-211ENST00000558440 MLLT3P42568 568 aaPredicted RBP11.08□□□□□ -0.64
ZEB1-211ENST00000558440 HAP1P54257 671 aaPredicted RBP11.08□□□□□ -0.64
ZEB1-211ENST00000558440 PTPN5P54829 565 aa11.08□□□□□ -0.64
ZEB1-211ENST00000558440 SEPT9Q9UHD8 586 aaPredicted RBP11.08□□□□□ -0.64
ZEB1-211ENST00000558440 PRSS12P56730 875 aa11.07□□□□□ -0.64
ZEB1-211ENST00000558440 ANKK1Q8NFD2 765 aa11.07□□□□□ -0.64
ZEB1-211ENST00000558440 CDCA7LQ96GN5 454 aa11.07□□□□□ -0.64
ZEB1-211ENST00000558440 FGD5Q6ZNL6 1462 aa11.06□□□□□ -0.64
ZEB1-211ENST00000558440 MAGI1Q96QZ7 1491 aaPredicted RBP11.06□□□□□ -0.64
ZEB1-211ENST00000558440 PBRM1Q86U86 1689 aa11.06□□□□□ -0.64
ZEB1-211ENST00000558440 PACS2Q86VP3 889 aa11.06□□□□□ -0.64
ZEB1-211ENST00000558440 CHMP7Q8WUX9 453 aaPredicted RBP11.06□□□□□ -0.64
ZEB1-211ENST00000558440 FAM98CQ17RN3 349 aaKnown RBP11.05□□□□□ -0.64
ZEB1-211ENST00000558440 ZFRQ96KR1 1074 aaKnown RBP11.05□□□□□ -0.64
ZEB1-211ENST00000558440 RBM27Q9P2N5 1060 aaKnown RBP11.04□□□□□ -0.64
ZEB1-211ENST00000558440 FAM198AQ9UFP1 575 aa11.04□□□□□ -0.64
ZEB1-211ENST00000558440 GRIN2BQ13224 1484 aa11.04□□□□□ -0.64
ZEB1-211ENST00000558440 SYNJ2O15056 1496 aa11.02□□□□□ -0.65
ZEB1-211ENST00000558440 RGS20O76081 388 aa11.02□□□□□ -0.65
ZEB1-211ENST00000558440 NPDC1Q9NQX5 325 aaPredicted RBP11.02□□□□□ -0.65
ZEB1-211ENST00000558440 CUX1P39880 1505 aa11.02□□□□□ -0.65
ZEB1-211ENST00000558440 SOWAHBA6NEL2 793 aa11.01□□□□□ -0.65
ZEB1-211ENST00000558440 BCAMP50895 628 aa11.01□□□□□ -0.65
ZEB1-211ENST00000558440 NBPF26B4DH59 902 aa10.99□□□□□ -0.65
ZEB1-211ENST00000558440 SEMA3EO15041 775 aa10.99□□□□□ -0.65
ZEB1-211ENST00000558440 IRX2Q9BZI1 471 aaPredicted RBP10.99□□□□□ -0.65
ZEB1-211ENST00000558440 C3orf80F5H4A9 247 aa10.98□□□□□ -0.65
ZEB1-211ENST00000558440 IFFO2Q5TF58 517 aa10.98□□□□□ -0.65
ZEB1-211ENST00000558440 TTC13Q8NBP0 860 aa10.98□□□□□ -0.65
ZEB1-211ENST00000558440 KDM2AQ9Y2K7 1162 aa10.98□□□□□ -0.65
ZEB1-211ENST00000558440 GAPVD1Q14C86 1478 aa10.98□□□□□ -0.65
ZEB1-211ENST00000558440 SMAPO00193 183 aa10.97□□□□□ -0.65
ZEB1-211ENST00000558440 PADI6Q6TGC4 694 aa10.97□□□□□ -0.65
ZEB1-211ENST00000558440 TATDN2Q93075 761 aa10.97□□□□□ -0.65
ZEB1-211ENST00000558440 PNMA3Q9UL41 463 aa10.97□□□□□ -0.65
ZEB1-211ENST00000558440 LRCH3Q96II8 777 aa10.96□□□□□ -0.65
ZEB1-211ENST00000558440 ABCA5Q8WWZ7 1642 aa10.95□□□□□ -0.66
ZEB1-211ENST00000558440 CDKN2AIPQ9NXV6 580 aaPredicted RBP10.95□□□□□ -0.66
ZEB1-211ENST00000558440 PTGDRQ13258 359 aa10.94□□□□□ -0.66
ZEB1-211ENST00000558440 NUDT18Q6ZVK8 323 aa10.94□□□□□ -0.66
ZEB1-211ENST00000558440 NYAP1Q6ZVC0 841 aa10.93□□□□□ -0.66
ZEB1-211ENST00000558440 ABCA10Q8WWZ4 1543 aa10.93□□□□□ -0.66
ZEB1-211ENST00000558440 A0A0G2JS52 829 aa10.92□□□□□ -0.66
ZEB1-211ENST00000558440 TESPA1A2RU30 521 aaPredicted RBP10.92□□□□□ -0.66
ZEB1-211ENST00000558440 WBP1LQ9NX94 342 aa10.92□□□□□ -0.66
ZEB1-211ENST00000558440 TSR3Q9UJK0 312 aaKnown RBP10.92□□□□□ -0.66
ZEB1-211ENST00000558440 SAMD7Q7Z3H4 446 aa10.91□□□□□ -0.66
ZEB1-211ENST00000558440 VSIG10Q8N0Z9 540 aa10.91□□□□□ -0.66
ZEB1-211ENST00000558440 HPS5Q9UPZ3 1129 aa10.91□□□□□ -0.66
ZEB1-211ENST00000558440 NUTM2FA1L443 756 aa10.9□□□□□ -0.66
ZEB1-211ENST00000558440 ERCC6L2Q5T890 1561 aa10.9□□□□□ -0.67
ZEB1-211ENST00000558440 GRIN2AQ12879 1464 aa10.89□□□□□ -0.67
ZEB1-211ENST00000558440 ADAMTS12P58397 1594 aa10.89□□□□□ -0.67
ZEB1-211ENST00000558440 CEP170Q5SW79 1584 aa10.88□□□□□ -0.67
ZEB1-211ENST00000558440 KIF13AQ9H1H9 1805 aa10.88□□□□□ -0.67
ZEB1-211ENST00000558440 SMYD5Q6GMV2 418 aa10.87□□□□□ -0.67
ZEB1-211ENST00000558440 SHROOM2Q13796 1616 aa10.87□□□□□ -0.67
ZEB1-211ENST00000558440 FCHSD2O94868 740 aa10.86□□□□□ -0.67
ZEB1-211ENST00000558440 ITGBL1O95965 494 aaPredicted RBP10.86□□□□□ -0.67
ZEB1-211ENST00000558440 EYA1Q99502 592 aa10.86□□□□□ -0.67
ZEB1-211ENST00000558440 PPP4CP60510 307 aa10.85□□□□□ -0.67
ZEB1-211ENST00000558440 NUP160Q12769 1436 aa10.84□□□□□ -0.67
ZEB1-211ENST00000558440 WRNQ14191 1432 aaPredicted RBP eCLIP10.84□□□□□ -0.67
ZEB1-211ENST00000558440 BIVM-ERCC5R4GMW8 1640 aa10.84□□□□□ -0.67
ZEB1-211ENST00000558440 RBM26Q5T8P6 1007 aaKnown RBP10.84□□□□□ -0.67
ZEB1-211ENST00000558440 HDGFP51858 240 aaKnown RBP10.83□□□□□ -0.68
ZEB1-211ENST00000558440 ADGRG1Q9Y653 693 aa10.82□□□□□ -0.68
ZEB1-211ENST00000558440 TOP2BQ02880 1626 aa10.82□□□□□ -0.68
ZEB1-211ENST00000558440 FHAD1B1AJZ9 1412 aa10.82□□□□□ -0.68
ZEB1-211ENST00000558440 SWT1Q5T5J6 900 aaKnown RBP10.81□□□□□ -0.68
ZEB1-211ENST00000558440 ERICH3Q5RHP9 1530 aa10.8□□□□□ -0.68
ZEB1-211ENST00000558440 RBM46Q8TBY0 533 aaKnown RBP10.8□□□□□ -0.68
ZEB1-211ENST00000558440 RNF40O75150 1001 aa10.79□□□□□ -0.68
ZEB1-211ENST00000558440 HIC1Q14526 733 aa10.79□□□□□ -0.68
ZEB1-211ENST00000558440 SLF2Q8IX21 1173 aa10.79□□□□□ -0.68
ZEB1-211ENST00000558440 DNAJB2P25686 324 aa10.78□□□□□ -0.68
ZEB1-211ENST00000558440 GPR37O15354 613 aa10.77□□□□□ -0.69
ZEB1-211ENST00000558440 KCNC4Q03721 635 aa10.77□□□□□ -0.69
ZEB1-211ENST00000558440 NECTIN2Q92692 538 aa10.77□□□□□ -0.69
ZEB1-211ENST00000558440 PRG4Q92954 1404 aaPredicted RBP10.76□□□□□ -0.69
ZEB1-211ENST00000558440 FAM161AQ3B820 660 aa10.76□□□□□ -0.69
ZEB1-211ENST00000558440 SUPT5HO00267 1087 aaKnown RBP10.75□□□□□ -0.69
ZEB1-211ENST00000558440 GNPATO15228 680 aa10.75□□□□□ -0.69
ZEB1-211ENST00000558440 SLC4A3P48751 1232 aa10.75□□□□□ -0.69
ZEB1-211ENST00000558440 Q6ZNB5 142 aa10.75□□□□□ -0.69
ZEB1-211ENST00000558440 TMEM134Q9H6X4 195 aa10.75□□□□□ -0.69
ZEB1-211ENST00000558440 RUSC2Q8N2Y8 1516 aa10.74□□□□□ -0.69
ZEB1-211ENST00000558440 RCCD1A6NED2 376 aa10.74□□□□□ -0.69
ZEB1-211ENST00000558440 TSPOAP1O95153 1857 aa10.74□□□□□ -0.69
ZEB1-211ENST00000558440 APLP1P51693 650 aa10.73□□□□□ -0.69
ZEB1-211ENST00000558440 OATP04181 439 aa10.72□□□□□ -0.69
ZEB1-211ENST00000558440 TJAP1Q5JTD0 557 aa10.72□□□□□ -0.69
ZEB1-211ENST00000558440 GPIHBP1Q8IV16 184 aa10.72□□□□□ -0.69
ZEB1-211ENST00000558440 PXYLP1Q8TE99 480 aa10.72□□□□□ -0.69
ZEB1-211ENST00000558440 ABCC10Q5T3U5 1492 aa10.72□□□□□ -0.69
ZEB1-211ENST00000558440 MAPKBP1O60336 1514 aa10.72□□□□□ -0.69
ZEB1-211ENST00000558440 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP10.71□□□□□ -0.69
ZEB1-211ENST00000558440 FECHP22830 423 aa10.71□□□□□ -0.69
ZEB1-211ENST00000558440 FAM69CQ0P6D2 419 aa10.71□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 21.9 ms