RNA–Protein interactions for RNA: ENST00000558380.1

PIF1-203, Transcript of PIF1 5'-to-3' DNA helicase, humanhuman

TSL 3

Gene PIF1, Length 673 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PIF1-203ENST00000558380 NWD1Q149M9 1564 aa23.6■■□□□ 1.37
PIF1-203ENST00000558380 HDGFP51858 240 aaKnown RBP23.59■■□□□ 1.37
PIF1-203ENST00000558380 TRPM2O94759 1503 aa23.58■■□□□ 1.36
PIF1-203ENST00000558380 ABCF1Q8NE71 845 aaKnown RBP eCLIP23.57■■□□□ 1.36
PIF1-203ENST00000558380 NKTRP30414 1462 aaKnown RBP23.56■■□□□ 1.36
PIF1-203ENST00000558380 KCNA6P17658 529 aa23.56■■□□□ 1.36
PIF1-203ENST00000558380 SLC26A8Q96RN1 970 aa23.55■■□□□ 1.36
PIF1-203ENST00000558380 DIP2AQ14689 1571 aa23.54■■□□□ 1.36
PIF1-203ENST00000558380 XIRP1Q702N8 1843 aaKnown RBP23.54■■□□□ 1.36
PIF1-203ENST00000558380 CHGAP10645 457 aaKnown RBP23.53■■□□□ 1.36
PIF1-203ENST00000558380 CLTCL1P53675 1640 aa23.52■■□□□ 1.36
PIF1-203ENST00000558380 PPP1R15AO75807 674 aaPredicted RBP23.52■■□□□ 1.36
PIF1-203ENST00000558380 ADAMTS13Q76LX8 1427 aa23.51■■□□□ 1.35
PIF1-203ENST00000558380 TBX22Q9Y458 520 aa23.5■■□□□ 1.35
PIF1-203ENST00000558380 TMEM94Q12767 1356 aa23.49■■□□□ 1.35
PIF1-203ENST00000558380 PIP4K2BP78356 416 aa23.48■■□□□ 1.35
PIF1-203ENST00000558380 CHD2O14647 1828 aaKnown RBP23.47■■□□□ 1.35
PIF1-203ENST00000558380 PIK3R4Q99570 1358 aa23.47■■□□□ 1.35
PIF1-203ENST00000558380 TRIM52Q96A61 297 aa23.46■■□□□ 1.35
PIF1-203ENST00000558380 BCANQ96GW7 911 aa23.46■■□□□ 1.35
PIF1-203ENST00000558380 SETBP1Q9Y6X0 1596 aa23.46■■□□□ 1.35
PIF1-203ENST00000558380 SCAF1Q9H7N4 1312 aaKnown RBP23.45■■□□□ 1.34
PIF1-203ENST00000558380 HSPA1LP34931 641 aa23.44■■□□□ 1.34
PIF1-203ENST00000558380 SLC4A1APQ9BWU0 796 aaKnown RBP23.44■■□□□ 1.34
PIF1-203ENST00000558380 NEXMIFQ5QGS0 1516 aa23.43■■□□□ 1.34
PIF1-203ENST00000558380 NRXN3Q9Y4C0 1643 aa23.43■■□□□ 1.34
PIF1-203ENST00000558380 NUTM2DQ5VT03 806 aaPredicted RBP23.42■■□□□ 1.34
PIF1-203ENST00000558380 PROSER2Q86WR7 435 aaPredicted RBP23.42■■□□□ 1.34
PIF1-203ENST00000558380 NCOA3Q9Y6Q9 1424 aa23.42■■□□□ 1.34
PIF1-203ENST00000558380 KIF1BO60333 1816 aa23.4■■□□□ 1.34
PIF1-203ENST00000558380 ACIN1Q9UKV3 1341 aaKnown RBP23.39■■□□□ 1.34
PIF1-203ENST00000558380 SENP3Q9H4L4 574 aaPredicted RBP23.38■■□□□ 1.33
PIF1-203ENST00000558380 DISP3Q9P2K9 1392 aa23.38■■□□□ 1.33
PIF1-203ENST00000558380 FAM135BQ49AJ0 1406 aa23.37■■□□□ 1.33
PIF1-203ENST00000558380 ZNF326Q5BKZ1 582 aaKnown RBP23.37■■□□□ 1.33
PIF1-203ENST00000558380 PTPRUQ92729 1446 aa23.35■■□□□ 1.33
PIF1-203ENST00000558380 SETD5Q9C0A6 1442 aa23.35■■□□□ 1.33
PIF1-203ENST00000558380 MSH6P52701 1360 aa23.35■■□□□ 1.33
PIF1-203ENST00000558380 XRN1Q8IZH2 1706 aaKnown RBP23.34■■□□□ 1.33
PIF1-203ENST00000558380 RBM33Q96EV2 1170 aaKnown RBP23.34■■□□□ 1.33
PIF1-203ENST00000558380 MPHOSPH9Q99550 1183 aa23.32■■□□□ 1.32
PIF1-203ENST00000558380 RPGRIP1LQ68CZ1 1315 aa23.32■■□□□ 1.32
PIF1-203ENST00000558380 AMOTL2Q9Y2J4 779 aa23.3■■□□□ 1.32
PIF1-203ENST00000558380 METP08581 1390 aa23.29■■□□□ 1.32
PIF1-203ENST00000558380 CCDC144AA2RUR9 1427 aa23.29■■□□□ 1.32
PIF1-203ENST00000558380 ROBO1Q9Y6N7 1651 aa23.28■■□□□ 1.32
PIF1-203ENST00000558380 MED1Q15648 1581 aaPredicted RBP23.28■■□□□ 1.32
PIF1-203ENST00000558380 VGFO15240 615 aaPredicted RBP23.28■■□□□ 1.32
PIF1-203ENST00000558380 FOXD1Q16676 465 aa23.28■■□□□ 1.32
PIF1-203ENST00000558380 SPATA31E1Q6ZUB1 1445 aa23.27■■□□□ 1.32
PIF1-203ENST00000558380 PPLO60437 1756 aa23.27■■□□□ 1.32
PIF1-203ENST00000558380 SETD1AO15047 1707 aaKnown RBP23.26■■□□□ 1.31
PIF1-203ENST00000558380 RAB3GAP2Q9H2M9 1393 aa23.26■■□□□ 1.31
PIF1-203ENST00000558380 DCCP43146 1447 aa23.25■■□□□ 1.31
PIF1-203ENST00000558380 PRAG1Q86YV5 1406 aa23.25■■□□□ 1.31
PIF1-203ENST00000558380 SIPA1L2Q9P2F8 1722 aaPredicted RBP23.24■■□□□ 1.31
PIF1-203ENST00000558380 C19orf44Q9H6X5 657 aa23.23■■□□□ 1.31
PIF1-203ENST00000558380 SLAIN2Q9P270 581 aa23.23■■□□□ 1.31
PIF1-203ENST00000558380 PTCH1Q13635 1447 aa23.2■■□□□ 1.3
PIF1-203ENST00000558380 ILDR2Q71H61 639 aa23.2■■□□□ 1.3
PIF1-203ENST00000558380 CADPS2Q86UW7 1296 aa23.2■■□□□ 1.3
PIF1-203ENST00000558380 IFT172Q9UG01 1749 aa23.19■■□□□ 1.3
PIF1-203ENST00000558380 C14orf37Q86TY3 774 aa23.18■■□□□ 1.3
PIF1-203ENST00000558380 ANKRD30BQ9BXX2 1392 aa23.17■■□□□ 1.3
PIF1-203ENST00000558380 HRCP23327 699 aa23.17■■□□□ 1.3
PIF1-203ENST00000558380 ADGRL3Q9HAR2 1447 aa23.16■■□□□ 1.3
PIF1-203ENST00000558380 ATF3P18847 181 aa23.16■■□□□ 1.3
PIF1-203ENST00000558380 AHDC1Q5TGY3 1603 aaPredicted RBP23.13■■□□□ 1.29
PIF1-203ENST00000558380 ADGRF5Q8IZF2 1346 aa23.12■■□□□ 1.29
PIF1-203ENST00000558380 PIK3C2GO75747 1445 aa23.12■■□□□ 1.29
PIF1-203ENST00000558380 NALCNQ8IZF0 1738 aa23.12■■□□□ 1.29
PIF1-203ENST00000558380 COL16A1Q07092 1604 aaPredicted RBP23.11■■□□□ 1.29
PIF1-203ENST00000558380 PHLPP1O60346 1717 aa23.11■■□□□ 1.29
PIF1-203ENST00000558380 MST1RQ04912 1400 aa23.11■■□□□ 1.29
PIF1-203ENST00000558380 ROBO2Q9HCK4 1378 aa23.11■■□□□ 1.29
PIF1-203ENST00000558380 RGL3Q3MIN7 710 aa23.1■■□□□ 1.29
PIF1-203ENST00000558380 NRXN1Q9ULB1 1477 aa23.09■■□□□ 1.29
PIF1-203ENST00000558380 MYOM2P54296 1465 aa23.08■■□□□ 1.29
PIF1-203ENST00000558380 TECPR2O15040 1411 aa23.08■■□□□ 1.28
PIF1-203ENST00000558380 ASXL1Q8IXJ9 1541 aa23.07■■□□□ 1.28
PIF1-203ENST00000558380 BRINP3Q76B58 766 aa23.06■■□□□ 1.28
PIF1-203ENST00000558380 JCADQ9P266 1359 aa23.05■■□□□ 1.28
PIF1-203ENST00000558380 SOCS7O14512 581 aa23.03■■□□□ 1.28
PIF1-203ENST00000558380 LRPPRCP42704 1394 aaKnown RBP23.02■■□□□ 1.28
PIF1-203ENST00000558380 KNDC1Q76NI1 1749 aa23.02■■□□□ 1.28
PIF1-203ENST00000558380 NHSL1Q5SYE7 1610 aa23.02■■□□□ 1.28
PIF1-203ENST00000558380 PHF23Q9BUL5 403 aaPredicted RBP23.02■■□□□ 1.28
PIF1-203ENST00000558380 LAMC1P11047 1609 aa23.01■■□□□ 1.27
PIF1-203ENST00000558380 ABCC11Q96J66 1382 aa23.01■■□□□ 1.27
PIF1-203ENST00000558380 C1orf167Q5SNV9 1468 aa22.99■■□□□ 1.27
PIF1-203ENST00000558380 CDC42BPGQ6DT37 1551 aa22.99■■□□□ 1.27
PIF1-203ENST00000558380 SHPRHQ149N8 1683 aa22.99■■□□□ 1.27
PIF1-203ENST00000558380 C14orf93Q9H972 538 aaKnown RBP22.97■■□□□ 1.27
PIF1-203ENST00000558380 YTHDC2Q9H6S0 1430 aaKnown RBP22.97■■□□□ 1.27
PIF1-203ENST00000558380 RGS17Q9UGC6 210 aaPredicted RBP22.96■■□□□ 1.27
PIF1-203ENST00000558380 SPATA31A6Q5VVP1 1343 aa22.96■■□□□ 1.27
PIF1-203ENST00000558380 TMEM132EQ6IEE7 984 aa22.93■■□□□ 1.26
PIF1-203ENST00000558380 SIRT1Q96EB6 747 aa22.93■■□□□ 1.26
PIF1-203ENST00000558380 STAC3Q96MF2 364 aa22.92■■□□□ 1.26
PIF1-203ENST00000558380 LRP6O75581 1613 aa22.92■■□□□ 1.26
Retrieved 100 of 20,778 RNA–protein pairs in 13.6 ms