RNA–Protein interactions for RNA: ENST00000557437.1

SEC23A-214, Transcript of Sec23 homolog A, coat complex II component, humanhuman

TSL 4

Gene SEC23A, Length 575 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC23A-214ENST00000557437 HDGFP51858 240 aaKnown RBP22.63■■□□□ 1.21
SEC23A-214ENST00000557437 SLC26A8Q96RN1 970 aa22.63■■□□□ 1.21
SEC23A-214ENST00000557437 KCNA6P17658 529 aa22.61■■□□□ 1.21
SEC23A-214ENST00000557437 ABCF1Q8NE71 845 aaKnown RBP eCLIP22.61■■□□□ 1.21
SEC23A-214ENST00000557437 XIRP1Q702N8 1843 aaKnown RBP22.6■■□□□ 1.21
SEC23A-214ENST00000557437 CHGAP10645 457 aaKnown RBP22.6■■□□□ 1.21
SEC23A-214ENST00000557437 NWD1Q149M9 1564 aa22.59■■□□□ 1.21
SEC23A-214ENST00000557437 TRPM2O94759 1503 aa22.58■■□□□ 1.21
SEC23A-214ENST00000557437 NKTRP30414 1462 aaKnown RBP22.56■■□□□ 1.2
SEC23A-214ENST00000557437 PPP1R15AO75807 674 aaPredicted RBP22.56■■□□□ 1.2
SEC23A-214ENST00000557437 PIP4K2BP78356 416 aa22.56■■□□□ 1.2
SEC23A-214ENST00000557437 TBX22Q9Y458 520 aa22.56■■□□□ 1.2
SEC23A-214ENST00000557437 ADAMTS13Q76LX8 1427 aa22.55■■□□□ 1.2
SEC23A-214ENST00000557437 CLTCL1P53675 1640 aa22.54■■□□□ 1.2
SEC23A-214ENST00000557437 TMEM94Q12767 1356 aa22.53■■□□□ 1.2
SEC23A-214ENST00000557437 CHD2O14647 1828 aaKnown RBP22.53■■□□□ 1.2
SEC23A-214ENST00000557437 TRIM52Q96A61 297 aa22.53■■□□□ 1.2
SEC23A-214ENST00000557437 BCANQ96GW7 911 aa22.53■■□□□ 1.2
SEC23A-214ENST00000557437 DIP2AQ14689 1571 aa22.52■■□□□ 1.2
SEC23A-214ENST00000557437 SCAF1Q9H7N4 1312 aaKnown RBP22.52■■□□□ 1.2
SEC23A-214ENST00000557437 HSPA1LP34931 641 aa22.51■■□□□ 1.19
SEC23A-214ENST00000557437 NUTM2DQ5VT03 806 aaPredicted RBP22.51■■□□□ 1.19
SEC23A-214ENST00000557437 SLC4A1APQ9BWU0 796 aaKnown RBP22.5■■□□□ 1.19
SEC23A-214ENST00000557437 SENP3Q9H4L4 574 aaPredicted RBP22.5■■□□□ 1.19
SEC23A-214ENST00000557437 PROSER2Q86WR7 435 aaPredicted RBP22.49■■□□□ 1.19
SEC23A-214ENST00000557437 PIK3R4Q99570 1358 aa22.49■■□□□ 1.19
SEC23A-214ENST00000557437 NRXN3Q9Y4C0 1643 aa22.47■■□□□ 1.19
SEC23A-214ENST00000557437 NEXMIFQ5QGS0 1516 aa22.47■■□□□ 1.19
SEC23A-214ENST00000557437 SETBP1Q9Y6X0 1596 aa22.46■■□□□ 1.19
SEC23A-214ENST00000557437 KIF1BO60333 1816 aa22.45■■□□□ 1.18
SEC23A-214ENST00000557437 ZNF326Q5BKZ1 582 aaKnown RBP22.44■■□□□ 1.18
SEC23A-214ENST00000557437 RBM33Q96EV2 1170 aaKnown RBP22.44■■□□□ 1.18
SEC23A-214ENST00000557437 NCOA3Q9Y6Q9 1424 aa22.43■■□□□ 1.18
SEC23A-214ENST00000557437 DISP3Q9P2K9 1392 aa22.43■■□□□ 1.18
SEC23A-214ENST00000557437 FAM135BQ49AJ0 1406 aa22.41■■□□□ 1.18
SEC23A-214ENST00000557437 PTPRUQ92729 1446 aa22.41■■□□□ 1.18
SEC23A-214ENST00000557437 ACIN1Q9UKV3 1341 aaKnown RBP22.4■■□□□ 1.18
SEC23A-214ENST00000557437 MPHOSPH9Q99550 1183 aa22.4■■□□□ 1.18
SEC23A-214ENST00000557437 SETD5Q9C0A6 1442 aa22.4■■□□□ 1.18
SEC23A-214ENST00000557437 MSH6P52701 1360 aa22.38■■□□□ 1.17
SEC23A-214ENST00000557437 FOXD1Q16676 465 aa22.38■■□□□ 1.17
SEC23A-214ENST00000557437 AMOTL2Q9Y2J4 779 aa22.37■■□□□ 1.17
SEC23A-214ENST00000557437 XRN1Q8IZH2 1706 aaKnown RBP22.37■■□□□ 1.17
SEC23A-214ENST00000557437 RPGRIP1LQ68CZ1 1315 aa22.36■■□□□ 1.17
SEC23A-214ENST00000557437 METP08581 1390 aa22.36■■□□□ 1.17
SEC23A-214ENST00000557437 VGFO15240 615 aaPredicted RBP22.33■■□□□ 1.17
SEC23A-214ENST00000557437 ROBO1Q9Y6N7 1651 aa22.33■■□□□ 1.16
SEC23A-214ENST00000557437 CCDC144AA2RUR9 1427 aa22.32■■□□□ 1.16
SEC23A-214ENST00000557437 SPATA31E1Q6ZUB1 1445 aa22.31■■□□□ 1.16
SEC23A-214ENST00000557437 PPLO60437 1756 aa22.31■■□□□ 1.16
SEC23A-214ENST00000557437 MED1Q15648 1581 aaPredicted RBP22.31■■□□□ 1.16
SEC23A-214ENST00000557437 RAB3GAP2Q9H2M9 1393 aa22.31■■□□□ 1.16
SEC23A-214ENST00000557437 SLAIN2Q9P270 581 aa22.31■■□□□ 1.16
SEC23A-214ENST00000557437 ILDR2Q71H61 639 aa22.3■■□□□ 1.16
SEC23A-214ENST00000557437 C19orf44Q9H6X5 657 aa22.3■■□□□ 1.16
SEC23A-214ENST00000557437 SETD1AO15047 1707 aaKnown RBP22.3■■□□□ 1.16
SEC23A-214ENST00000557437 SIPA1L2Q9P2F8 1722 aaPredicted RBP22.29■■□□□ 1.16
SEC23A-214ENST00000557437 CADPS2Q86UW7 1296 aa22.26■■□□□ 1.15
SEC23A-214ENST00000557437 DCCP43146 1447 aa22.25■■□□□ 1.15
SEC23A-214ENST00000557437 PRAG1Q86YV5 1406 aa22.25■■□□□ 1.15
SEC23A-214ENST00000557437 C14orf37Q86TY3 774 aa22.25■■□□□ 1.15
SEC23A-214ENST00000557437 IFT172Q9UG01 1749 aa22.23■■□□□ 1.15
SEC23A-214ENST00000557437 ATF3P18847 181 aa22.22■■□□□ 1.15
SEC23A-214ENST00000557437 HRCP23327 699 aa22.22■■□□□ 1.15
SEC23A-214ENST00000557437 ANKRD30BQ9BXX2 1392 aa22.22■■□□□ 1.15
SEC23A-214ENST00000557437 PTCH1Q13635 1447 aa22.22■■□□□ 1.15
SEC23A-214ENST00000557437 ADGRF5Q8IZF2 1346 aa22.21■■□□□ 1.15
SEC23A-214ENST00000557437 RGL3Q3MIN7 710 aa22.2■■□□□ 1.14
SEC23A-214ENST00000557437 ADGRL3Q9HAR2 1447 aa22.2■■□□□ 1.14
SEC23A-214ENST00000557437 ROBO2Q9HCK4 1378 aa22.17■■□□□ 1.14
SEC23A-214ENST00000557437 PHLPP1O60346 1717 aa22.17■■□□□ 1.14
SEC23A-214ENST00000557437 NALCNQ8IZF0 1738 aa22.17■■□□□ 1.14
SEC23A-214ENST00000557437 MST1RQ04912 1400 aa22.16■■□□□ 1.14
SEC23A-214ENST00000557437 COL16A1Q07092 1604 aaPredicted RBP22.16■■□□□ 1.14
SEC23A-214ENST00000557437 PIK3C2GO75747 1445 aa22.15■■□□□ 1.14
SEC23A-214ENST00000557437 AHDC1Q5TGY3 1603 aaPredicted RBP22.15■■□□□ 1.14
SEC23A-214ENST00000557437 BRINP3Q76B58 766 aa22.13■■□□□ 1.13
SEC23A-214ENST00000557437 NRXN1Q9ULB1 1477 aa22.13■■□□□ 1.13
SEC23A-214ENST00000557437 ASXL1Q8IXJ9 1541 aa22.11■■□□□ 1.13
SEC23A-214ENST00000557437 TECPR2O15040 1411 aa22.11■■□□□ 1.13
SEC23A-214ENST00000557437 JCADQ9P266 1359 aa22.11■■□□□ 1.13
SEC23A-214ENST00000557437 MYOM2P54296 1465 aa22.1■■□□□ 1.13
SEC23A-214ENST00000557437 SOCS7O14512 581 aa22.1■■□□□ 1.13
SEC23A-214ENST00000557437 PHF23Q9BUL5 403 aaPredicted RBP22.08■■□□□ 1.13
SEC23A-214ENST00000557437 LRPPRCP42704 1394 aaKnown RBP22.08■■□□□ 1.12
SEC23A-214ENST00000557437 ABCC11Q96J66 1382 aa22.07■■□□□ 1.12
SEC23A-214ENST00000557437 C14orf93Q9H972 538 aaKnown RBP22.06■■□□□ 1.12
SEC23A-214ENST00000557437 RGS17Q9UGC6 210 aaPredicted RBP22.06■■□□□ 1.12
SEC23A-214ENST00000557437 NHSL1Q5SYE7 1610 aa22.06■■□□□ 1.12
SEC23A-214ENST00000557437 C1orf167Q5SNV9 1468 aa22.05■■□□□ 1.12
SEC23A-214ENST00000557437 KNDC1Q76NI1 1749 aa22.05■■□□□ 1.12
SEC23A-214ENST00000557437 TMEM132EQ6IEE7 984 aa22.04■■□□□ 1.12
SEC23A-214ENST00000557437 YTHDC2Q9H6S0 1430 aaKnown RBP22.03■■□□□ 1.12
SEC23A-214ENST00000557437 LAMC1P11047 1609 aa22.02■■□□□ 1.12
SEC23A-214ENST00000557437 SHPRHQ149N8 1683 aa22.02■■□□□ 1.12
SEC23A-214ENST00000557437 CDC42BPGQ6DT37 1551 aa22.02■■□□□ 1.12
SEC23A-214ENST00000557437 STK26Q9P289 416 aa22.01■■□□□ 1.11
SEC23A-214ENST00000557437 SPATA31A6Q5VVP1 1343 aa22.01■■□□□ 1.11
SEC23A-214ENST00000557437 CFAP70Q5T0N1 1121 aa22■■□□□ 1.11
SEC23A-214ENST00000557437 SIRT1Q96EB6 747 aa22■■□□□ 1.11
Retrieved 100 of 20,778 RNA–protein pairs in 66.6 ms