RNA–Protein interactions for RNA: ENST00000557358.1

VPS33B-206, Transcript of VPS33B, late endosome and lysosome associated, humanhuman

TSL 4

Gene VPS33B, Length 561 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS33B-206ENST00000557358 MYO5BQ9ULV0 1848 aa20.49■□□□□ 0.87
VPS33B-206ENST00000557358 ZNF326Q5BKZ1 582 aaKnown RBP20.49■□□□□ 0.87
VPS33B-206ENST00000557358 RIMS2Q9UQ26 1411 aa20.49■□□□□ 0.87
VPS33B-206ENST00000557358 TRPM2O94759 1503 aa20.46■□□□□ 0.87
VPS33B-206ENST00000557358 MPHOSPH9Q99550 1183 aa20.44■□□□□ 0.86
VPS33B-206ENST00000557358 PLEKHG1Q9ULL1 1385 aa20.44■□□□□ 0.86
VPS33B-206ENST00000557358 ZFYVE9O95405 1425 aa20.44■□□□□ 0.86
VPS33B-206ENST00000557358 KIF1BO60333 1816 aa20.43■□□□□ 0.86
VPS33B-206ENST00000557358 UBAP1LF5GYI3 381 aa20.43■□□□□ 0.86
VPS33B-206ENST00000557358 SLC26A8Q96RN1 970 aa20.43■□□□□ 0.86
VPS33B-206ENST00000557358 TOM1O60784 492 aa20.41■□□□□ 0.86
VPS33B-206ENST00000557358 NUTM2DQ5VT03 806 aaPredicted RBP20.4■□□□□ 0.86
VPS33B-206ENST00000557358 RAB3GAP2Q9H2M9 1393 aa20.4■□□□□ 0.86
VPS33B-206ENST00000557358 KCNA6P17658 529 aa20.39■□□□□ 0.85
VPS33B-206ENST00000557358 CLTCL1P53675 1640 aa20.38■□□□□ 0.85
VPS33B-206ENST00000557358 CCDC144AA2RUR9 1427 aa20.38■□□□□ 0.85
VPS33B-206ENST00000557358 SENP3Q9H4L4 574 aaPredicted RBP20.38■□□□□ 0.85
VPS33B-206ENST00000557358 HRCP23327 699 aa20.37■□□□□ 0.85
VPS33B-206ENST00000557358 TBX22Q9Y458 520 aa20.37■□□□□ 0.85
VPS33B-206ENST00000557358 RPGRIP1LQ68CZ1 1315 aa20.35■□□□□ 0.85
VPS33B-206ENST00000557358 VGFO15240 615 aaPredicted RBP20.35■□□□□ 0.85
VPS33B-206ENST00000557358 FOXD1Q16676 465 aa20.35■□□□□ 0.85
VPS33B-206ENST00000557358 DIP2AQ14689 1571 aa20.34■□□□□ 0.85
VPS33B-206ENST00000557358 SCAF1Q9H7N4 1312 aaKnown RBP20.34■□□□□ 0.85
VPS33B-206ENST00000557358 PROSER2Q86WR7 435 aaPredicted RBP20.34■□□□□ 0.85
VPS33B-206ENST00000557358 LRRC7Q96NW7 1537 aa20.33■□□□□ 0.85
VPS33B-206ENST00000557358 STRCP1A6NGW2 1772 aa20.32■□□□□ 0.84
VPS33B-206ENST00000557358 PIK3R4Q99570 1358 aa20.32■□□□□ 0.84
VPS33B-206ENST00000557358 NKTRP30414 1462 aaKnown RBP20.3■□□□□ 0.84
VPS33B-206ENST00000557358 PIP4K2BP78356 416 aa20.29■□□□□ 0.84
VPS33B-206ENST00000557358 CHD2O14647 1828 aaKnown RBP20.27■□□□□ 0.84
VPS33B-206ENST00000557358 NEXMIFQ5QGS0 1516 aa20.27■□□□□ 0.83
VPS33B-206ENST00000557358 ADAMTS13Q76LX8 1427 aa20.27■□□□□ 0.83
VPS33B-206ENST00000557358 NWD1Q149M9 1564 aa20.26■□□□□ 0.83
VPS33B-206ENST00000557358 TMEM94Q12767 1356 aa20.26■□□□□ 0.83
VPS33B-206ENST00000557358 RGL3Q3MIN7 710 aa20.26■□□□□ 0.83
VPS33B-206ENST00000557358 C14orf37Q86TY3 774 aa20.26■□□□□ 0.83
VPS33B-206ENST00000557358 SETBP1Q9Y6X0 1596 aa20.25■□□□□ 0.83
VPS33B-206ENST00000557358 MSH6P52701 1360 aa20.24■□□□□ 0.83
VPS33B-206ENST00000557358 ANKRD30BQ9BXX2 1392 aa20.22■□□□□ 0.83
VPS33B-206ENST00000557358 AMOTL2Q9Y2J4 779 aa20.22■□□□□ 0.83
VPS33B-206ENST00000557358 NCOA3Q9Y6Q9 1424 aa20.2■□□□□ 0.82
VPS33B-206ENST00000557358 PPLO60437 1756 aa20.2■□□□□ 0.82
VPS33B-206ENST00000557358 XIRP1Q702N8 1843 aaKnown RBP20.18■□□□□ 0.82
VPS33B-206ENST00000557358 SPATA31E1Q6ZUB1 1445 aa20.18■□□□□ 0.82
VPS33B-206ENST00000557358 RBM33Q96EV2 1170 aaKnown RBP20.17■□□□□ 0.82
VPS33B-206ENST00000557358 NRXN3Q9Y4C0 1643 aa20.16■□□□□ 0.82
VPS33B-206ENST00000557358 ATF3P18847 181 aa20.15■□□□□ 0.82
VPS33B-206ENST00000557358 METP08581 1390 aa20.14■□□□□ 0.81
VPS33B-206ENST00000557358 CADPS2Q86UW7 1296 aa20.14■□□□□ 0.81
VPS33B-206ENST00000557358 C19orf44Q9H6X5 657 aa20.14■□□□□ 0.81
VPS33B-206ENST00000557358 ALKQ9UM73 1620 aa20.13■□□□□ 0.81
VPS33B-206ENST00000557358 PTPRUQ92729 1446 aa20.11■□□□□ 0.81
VPS33B-206ENST00000557358 ADGRF5Q8IZF2 1346 aa20.11■□□□□ 0.81
VPS33B-206ENST00000557358 HSPA1LP34931 641 aa20.11■□□□□ 0.81
VPS33B-206ENST00000557358 TRIM26Q12899 539 aaPredicted RBP20.11■□□□□ 0.81
VPS33B-206ENST00000557358 STAC3Q96MF2 364 aa20.11■□□□□ 0.81
VPS33B-206ENST00000557358 SLAIN2Q9P270 581 aa20.1■□□□□ 0.81
VPS33B-206ENST00000557358 XRN1Q8IZH2 1706 aaKnown RBP20.1■□□□□ 0.81
VPS33B-206ENST00000557358 IFT172Q9UG01 1749 aa20.1■□□□□ 0.81
VPS33B-206ENST00000557358 FAM135BQ49AJ0 1406 aa20.09■□□□□ 0.81
VPS33B-206ENST00000557358 MYOM2P54296 1465 aa20.05■□□□□ 0.8
VPS33B-206ENST00000557358 PIK3C2GO75747 1445 aa20.05■□□□□ 0.8
VPS33B-206ENST00000557358 DCCP43146 1447 aa20.05■□□□□ 0.8
VPS33B-206ENST00000557358 PTCH1Q13635 1447 aa20.05■□□□□ 0.8
VPS33B-206ENST00000557358 DCAF11Q8TEB1 546 aa20.04■□□□□ 0.8
VPS33B-206ENST00000557358 KDM2AQ9Y2K7 1162 aa20.04■□□□□ 0.8
VPS33B-206ENST00000557358 SETD1AO15047 1707 aaKnown RBP20.04■□□□□ 0.8
VPS33B-206ENST00000557358 SIPA1L2Q9P2F8 1722 aaPredicted RBP20.04■□□□□ 0.8
VPS33B-206ENST00000557358 STK26Q9P289 416 aa20.03■□□□□ 0.8
VPS33B-206ENST00000557358 LAMC1P11047 1609 aa20.02■□□□□ 0.8
VPS33B-206ENST00000557358 C14orf93Q9H972 538 aaKnown RBP20.02■□□□□ 0.8
VPS33B-206ENST00000557358 ADGRL3Q9HAR2 1447 aa20.02■□□□□ 0.79
VPS33B-206ENST00000557358 ROBO1Q9Y6N7 1651 aa20.01■□□□□ 0.79
VPS33B-206ENST00000557358 DHX57Q6P158 1386 aaKnown RBP20.01■□□□□ 0.79
VPS33B-206ENST00000557358 LRPPRCP42704 1394 aaKnown RBP20■□□□□ 0.79
VPS33B-206ENST00000557358 PRAG1Q86YV5 1406 aa20■□□□□ 0.79
VPS33B-206ENST00000557358 ROBO2Q9HCK4 1378 aa19.99■□□□□ 0.79
VPS33B-206ENST00000557358 TMEM132EQ6IEE7 984 aa19.99■□□□□ 0.79
VPS33B-206ENST00000557358 NRXN1Q9ULB1 1477 aa19.99■□□□□ 0.79
VPS33B-206ENST00000557358 DISP3Q9P2K9 1392 aa19.98■□□□□ 0.79
VPS33B-206ENST00000557358 CFAP70Q5T0N1 1121 aa19.98■□□□□ 0.79
VPS33B-206ENST00000557358 ABCC11Q96J66 1382 aa19.97■□□□□ 0.79
VPS33B-206ENST00000557358 YTHDC2Q9H6S0 1430 aaKnown RBP19.96■□□□□ 0.79
VPS33B-206ENST00000557358 TECPR2O15040 1411 aa19.94■□□□□ 0.78
VPS33B-206ENST00000557358 SIRT1Q96EB6 747 aa19.94■□□□□ 0.78
VPS33B-206ENST00000557358 KNDC1Q76NI1 1749 aa19.93■□□□□ 0.78
VPS33B-206ENST00000557358 NALCNQ8IZF0 1738 aa19.93■□□□□ 0.78
VPS33B-206ENST00000557358 PHLPP1O60346 1717 aa19.93■□□□□ 0.78
VPS33B-206ENST00000557358 POGKQ9P215 609 aa19.92■□□□□ 0.78
VPS33B-206ENST00000557358 PHF23Q9BUL5 403 aaPredicted RBP19.91■□□□□ 0.78
VPS33B-206ENST00000557358 MST1RQ04912 1400 aa19.91■□□□□ 0.78
VPS33B-206ENST00000557358 BRINP3Q76B58 766 aa19.9■□□□□ 0.78
VPS33B-206ENST00000557358 WAPLQ7Z5K2 1190 aa19.9■□□□□ 0.78
VPS33B-206ENST00000557358 NEUROD1Q13562 356 aa19.89■□□□□ 0.77
VPS33B-206ENST00000557358 ASXL1Q8IXJ9 1541 aa19.88■□□□□ 0.77
VPS33B-206ENST00000557358 JCADQ9P266 1359 aa19.87■□□□□ 0.77
VPS33B-206ENST00000557358 PRAM1Q96QH2 718 aa19.86■□□□□ 0.77
VPS33B-206ENST00000557358 TRAK1Q9UPV9 953 aa19.86■□□□□ 0.77
VPS33B-206ENST00000557358 AHDC1Q5TGY3 1603 aaPredicted RBP19.86■□□□□ 0.77
Retrieved 100 of 20,778 RNA–protein pairs in 18.5 ms