RNA–Protein interactions for RNA: ENST00000557349.5

TVP23C-CDRT4-204, Transcript of TVP23C-CDRT4 readthrough, humanhuman

TSL 2

Gene TVP23C-CDRT4, Length 1,005 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TVP23C-CDRT4-204ENST00000557349 CERKQ8TCT0 537 aa24.78■■□□□ 1.56
TVP23C-CDRT4-204ENST00000557349 HDGFP51858 240 aaKnown RBP24.77■■□□□ 1.56
TVP23C-CDRT4-204ENST00000557349 KIF1BO60333 1816 aa24.76■■□□□ 1.55
TVP23C-CDRT4-204ENST00000557349 ZNF326Q5BKZ1 582 aaKnown RBP24.74■■□□□ 1.55
TVP23C-CDRT4-204ENST00000557349 ABCF1Q8NE71 845 aaKnown RBP eCLIP24.74■■□□□ 1.55
TVP23C-CDRT4-204ENST00000557349 BCANQ96GW7 911 aa24.74■■□□□ 1.55
TVP23C-CDRT4-204ENST00000557349 CCDC144AA2RUR9 1427 aa24.73■■□□□ 1.55
TVP23C-CDRT4-204ENST00000557349 PLEKHG1Q9ULL1 1385 aa24.71■■□□□ 1.55
TVP23C-CDRT4-204ENST00000557349 HRCP23327 699 aa24.71■■□□□ 1.55
TVP23C-CDRT4-204ENST00000557349 NUTM2DQ5VT03 806 aaPredicted RBP24.71■■□□□ 1.55
TVP23C-CDRT4-204ENST00000557349 SENP3Q9H4L4 574 aaPredicted RBP24.71■■□□□ 1.55
TVP23C-CDRT4-204ENST00000557349 CPS1P31327 1500 aa24.71■■□□□ 1.55
TVP23C-CDRT4-204ENST00000557349 SLC26A8Q96RN1 970 aa24.67■■□□□ 1.54
TVP23C-CDRT4-204ENST00000557349 IQSEC2Q5JU85 1478 aa24.66■■□□□ 1.54
TVP23C-CDRT4-204ENST00000557349 NEXMIFQ5QGS0 1516 aa24.66■■□□□ 1.54
TVP23C-CDRT4-204ENST00000557349 FBXO41Q8TF61 875 aa24.64■■□□□ 1.54
TVP23C-CDRT4-204ENST00000557349 STRCP1A6NGW2 1772 aa24.62■■□□□ 1.53
TVP23C-CDRT4-204ENST00000557349 DIP2AQ14689 1571 aa24.62■■□□□ 1.53
TVP23C-CDRT4-204ENST00000557349 TRIM26Q12899 539 aaPredicted RBP24.61■■□□□ 1.53
TVP23C-CDRT4-204ENST00000557349 ILDR1Q86SU0 546 aaPredicted RBP24.61■■□□□ 1.53
TVP23C-CDRT4-204ENST00000557349 ADAMTS13Q76LX8 1427 aa24.58■■□□□ 1.53
TVP23C-CDRT4-204ENST00000557349 SPATA31E1Q6ZUB1 1445 aa24.57■■□□□ 1.52
TVP23C-CDRT4-204ENST00000557349 SETBP1Q9Y6X0 1596 aa24.57■■□□□ 1.52
TVP23C-CDRT4-204ENST00000557349 RPGRIP1LQ68CZ1 1315 aa24.57■■□□□ 1.52
TVP23C-CDRT4-204ENST00000557349 NWD1Q149M9 1564 aa24.56■■□□□ 1.52
TVP23C-CDRT4-204ENST00000557349 PPLO60437 1756 aa24.56■■□□□ 1.52
TVP23C-CDRT4-204ENST00000557349 LRRC7Q96NW7 1537 aa24.56■■□□□ 1.52
TVP23C-CDRT4-204ENST00000557349 NRXN3Q9Y4C0 1643 aa24.55■■□□□ 1.52
TVP23C-CDRT4-204ENST00000557349 RGL3Q3MIN7 710 aa24.55■■□□□ 1.52
TVP23C-CDRT4-204ENST00000557349 TBX22Q9Y458 520 aa24.55■■□□□ 1.52
TVP23C-CDRT4-204ENST00000557349 ANKRD30BQ9BXX2 1392 aa24.54■■□□□ 1.52
TVP23C-CDRT4-204ENST00000557349 KCNA6P17658 529 aa24.54■■□□□ 1.52
TVP23C-CDRT4-204ENST00000557349 NKTRP30414 1462 aaKnown RBP24.53■■□□□ 1.52
TVP23C-CDRT4-204ENST00000557349 VGFO15240 615 aaPredicted RBP24.53■■□□□ 1.52
TVP23C-CDRT4-204ENST00000557349 PIK3R4Q99570 1358 aa24.5■■□□□ 1.51
TVP23C-CDRT4-204ENST00000557349 IFT172Q9UG01 1749 aa24.49■■□□□ 1.51
TVP23C-CDRT4-204ENST00000557349 CHD2O14647 1828 aaKnown RBP24.49■■□□□ 1.51
TVP23C-CDRT4-204ENST00000557349 UBAP1LF5GYI3 381 aa24.49■■□□□ 1.51
TVP23C-CDRT4-204ENST00000557349 TMEM94Q12767 1356 aa24.45■■□□□ 1.5
TVP23C-CDRT4-204ENST00000557349 PROSER2Q86WR7 435 aaPredicted RBP24.45■■□□□ 1.5
TVP23C-CDRT4-204ENST00000557349 XIRP1Q702N8 1843 aaKnown RBP24.43■■□□□ 1.5
TVP23C-CDRT4-204ENST00000557349 METP08581 1390 aa24.42■■□□□ 1.5
TVP23C-CDRT4-204ENST00000557349 ADGRF5Q8IZF2 1346 aa24.42■■□□□ 1.5
TVP23C-CDRT4-204ENST00000557349 PTPRUQ92729 1446 aa24.42■■□□□ 1.5
TVP23C-CDRT4-204ENST00000557349 ALKQ9UM73 1620 aa24.42■■□□□ 1.5
TVP23C-CDRT4-204ENST00000557349 XRN1Q8IZH2 1706 aaKnown RBP24.41■■□□□ 1.5
TVP23C-CDRT4-204ENST00000557349 TOM1O60784 492 aa24.41■■□□□ 1.5
TVP23C-CDRT4-204ENST00000557349 AMOTL2Q9Y2J4 779 aa24.41■■□□□ 1.5
TVP23C-CDRT4-204ENST00000557349 SETD1AO15047 1707 aaKnown RBP24.41■■□□□ 1.5
TVP23C-CDRT4-204ENST00000557349 MYOM2P54296 1465 aa24.4■■□□□ 1.5
TVP23C-CDRT4-204ENST00000557349 RBM33Q96EV2 1170 aaKnown RBP24.4■■□□□ 1.5
TVP23C-CDRT4-204ENST00000557349 SCAF1Q9H7N4 1312 aaKnown RBP24.39■■□□□ 1.5
TVP23C-CDRT4-204ENST00000557349 PIK3C2GO75747 1445 aa24.38■■□□□ 1.49
TVP23C-CDRT4-204ENST00000557349 PIP4K2BP78356 416 aa24.36■■□□□ 1.49
TVP23C-CDRT4-204ENST00000557349 C14orf37Q86TY3 774 aa24.36■■□□□ 1.49
TVP23C-CDRT4-204ENST00000557349 MSH6P52701 1360 aa24.35■■□□□ 1.49
TVP23C-CDRT4-204ENST00000557349 DHX57Q6P158 1386 aaKnown RBP24.34■■□□□ 1.49
TVP23C-CDRT4-204ENST00000557349 NRXN1Q9ULB1 1477 aa24.33■■□□□ 1.49
TVP23C-CDRT4-204ENST00000557349 LAMC1P11047 1609 aa24.32■■□□□ 1.48
TVP23C-CDRT4-204ENST00000557349 NCOA3Q9Y6Q9 1424 aa24.32■■□□□ 1.48
TVP23C-CDRT4-204ENST00000557349 DCAF11Q8TEB1 546 aa24.31■■□□□ 1.48
TVP23C-CDRT4-204ENST00000557349 PTCH1Q13635 1447 aa24.29■■□□□ 1.48
TVP23C-CDRT4-204ENST00000557349 KDM2AQ9Y2K7 1162 aa24.29■■□□□ 1.48
TVP23C-CDRT4-204ENST00000557349 ASXL1Q8IXJ9 1541 aa24.28■■□□□ 1.48
TVP23C-CDRT4-204ENST00000557349 PRAG1Q86YV5 1406 aa24.26■■□□□ 1.47
TVP23C-CDRT4-204ENST00000557349 CFAP70Q5T0N1 1121 aa24.24■■□□□ 1.47
TVP23C-CDRT4-204ENST00000557349 STAC3Q96MF2 364 aa24.24■■□□□ 1.47
TVP23C-CDRT4-204ENST00000557349 PCGF6Q9BYE7 350 aa24.24■■□□□ 1.47
TVP23C-CDRT4-204ENST00000557349 C14orf93Q9H972 538 aaKnown RBP24.24■■□□□ 1.47
TVP23C-CDRT4-204ENST00000557349 ROBO2Q9HCK4 1378 aa24.24■■□□□ 1.47
TVP23C-CDRT4-204ENST00000557349 SIPA1L2Q9P2F8 1722 aaPredicted RBP24.24■■□□□ 1.47
TVP23C-CDRT4-204ENST00000557349 TMEM132EQ6IEE7 984 aa24.23■■□□□ 1.47
TVP23C-CDRT4-204ENST00000557349 STK26Q9P289 416 aa24.23■■□□□ 1.47
TVP23C-CDRT4-204ENST00000557349 LRPPRCP42704 1394 aaKnown RBP24.23■■□□□ 1.47
TVP23C-CDRT4-204ENST00000557349 ADGRL3Q9HAR2 1447 aa24.22■■□□□ 1.47
TVP23C-CDRT4-204ENST00000557349 SIN3AQ96ST3 1273 aa24.22■■□□□ 1.47
TVP23C-CDRT4-204ENST00000557349 C19orf44Q9H6X5 657 aa24.22■■□□□ 1.47
TVP23C-CDRT4-204ENST00000557349 KNDC1Q76NI1 1749 aa24.21■■□□□ 1.47
TVP23C-CDRT4-204ENST00000557349 NALCNQ8IZF0 1738 aa24.21■■□□□ 1.47
TVP23C-CDRT4-204ENST00000557349 YTHDC2Q9H6S0 1430 aaKnown RBP24.21■■□□□ 1.47
TVP23C-CDRT4-204ENST00000557349 ATF3P18847 181 aa24.21■■□□□ 1.47
TVP23C-CDRT4-204ENST00000557349 NEUROD1Q13562 356 aa24.21■■□□□ 1.47
TVP23C-CDRT4-204ENST00000557349 TECPR2O15040 1411 aa24.2■■□□□ 1.46
TVP23C-CDRT4-204ENST00000557349 DCCP43146 1447 aa24.2■■□□□ 1.46
TVP23C-CDRT4-204ENST00000557349 CADPS2Q86UW7 1296 aa24.2■■□□□ 1.46
TVP23C-CDRT4-204ENST00000557349 ROBO1Q9Y6N7 1651 aa24.18■■□□□ 1.46
TVP23C-CDRT4-204ENST00000557349 ABCC11Q96J66 1382 aa24.16■■□□□ 1.46
TVP23C-CDRT4-204ENST00000557349 HSPA1LP34931 641 aa24.16■■□□□ 1.46
TVP23C-CDRT4-204ENST00000557349 SLAIN2Q9P270 581 aa24.16■■□□□ 1.46
TVP23C-CDRT4-204ENST00000557349 FAM135BQ49AJ0 1406 aa24.16■■□□□ 1.46
TVP23C-CDRT4-204ENST00000557349 ADGRB1O14514 1584 aa24.16■■□□□ 1.46
TVP23C-CDRT4-204ENST00000557349 L3MBTL2Q969R5 705 aa24.12■■□□□ 1.45
TVP23C-CDRT4-204ENST00000557349 WAPLQ7Z5K2 1190 aa24.1■■□□□ 1.45
TVP23C-CDRT4-204ENST00000557349 PLEKHH1Q9ULM0 1364 aa24.1■■□□□ 1.45
TVP23C-CDRT4-204ENST00000557349 KIAA1210Q9ULL0 1709 aa24.1■■□□□ 1.45
TVP23C-CDRT4-204ENST00000557349 DLC1Q96QB1 1528 aa24.1■■□□□ 1.45
TVP23C-CDRT4-204ENST00000557349 MST1RQ04912 1400 aa24.1■■□□□ 1.45
TVP23C-CDRT4-204ENST00000557349 CDC42BPGQ6DT37 1551 aa24.09■■□□□ 1.45
TVP23C-CDRT4-204ENST00000557349 TONSLQ96HA7 1378 aa24.08■■□□□ 1.45
TVP23C-CDRT4-204ENST00000557349 TRAK1Q9UPV9 953 aa24.06■■□□□ 1.44
Retrieved 100 of 20,778 RNA–protein pairs in 15.8 ms