RNA–Protein interactions for RNA: ENST00000556761.1

ZFYVE1-209, Transcript of zinc finger FYVE-type containing 1, humanhuman

TSL 4

Gene ZFYVE1, Length 545 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZFYVE1-209ENST00000556761 SPHKAPQ2M3C7 1700 aa28.77■■■□□ 2.2
ZFYVE1-209ENST00000556761 CHGAP10645 457 aaKnown RBP28.76■■■□□ 2.19
ZFYVE1-209ENST00000556761 KCNA6P17658 529 aa28.76■■■□□ 2.19
ZFYVE1-209ENST00000556761 HDGFP51858 240 aaKnown RBP28.76■■■□□ 2.19
ZFYVE1-209ENST00000556761 ABCF1Q8NE71 845 aaKnown RBP eCLIP28.74■■■□□ 2.19
ZFYVE1-209ENST00000556761 XIRP1Q702N8 1843 aaKnown RBP28.73■■■□□ 2.19
ZFYVE1-209ENST00000556761 NWD1Q149M9 1564 aa28.71■■■□□ 2.19
ZFYVE1-209ENST00000556761 PPP1R15AO75807 674 aaPredicted RBP28.7■■■□□ 2.18
ZFYVE1-209ENST00000556761 TRPM2O94759 1503 aa28.69■■■□□ 2.18
ZFYVE1-209ENST00000556761 PIP4K2BP78356 416 aa28.69■■■□□ 2.18
ZFYVE1-209ENST00000556761 TBX22Q9Y458 520 aa28.69■■■□□ 2.18
ZFYVE1-209ENST00000556761 ADAMTS13Q76LX8 1427 aa28.69■■■□□ 2.18
ZFYVE1-209ENST00000556761 TRIM52Q96A61 297 aa28.68■■■□□ 2.18
ZFYVE1-209ENST00000556761 CLTCL1P53675 1640 aa28.66■■■□□ 2.18
ZFYVE1-209ENST00000556761 NUTM2DQ5VT03 806 aaPredicted RBP28.66■■■□□ 2.18
ZFYVE1-209ENST00000556761 BCANQ96GW7 911 aa28.66■■■□□ 2.18
ZFYVE1-209ENST00000556761 TMEM94Q12767 1356 aa28.65■■■□□ 2.18
ZFYVE1-209ENST00000556761 NKTRP30414 1462 aaKnown RBP28.65■■■□□ 2.18
ZFYVE1-209ENST00000556761 SENP3Q9H4L4 574 aaPredicted RBP28.64■■■□□ 2.18
ZFYVE1-209ENST00000556761 HSPA1LP34931 641 aa28.63■■■□□ 2.17
ZFYVE1-209ENST00000556761 CHD2O14647 1828 aaKnown RBP28.63■■■□□ 2.17
ZFYVE1-209ENST00000556761 SCAF1Q9H7N4 1312 aaKnown RBP28.63■■■□□ 2.17
ZFYVE1-209ENST00000556761 SLC4A1APQ9BWU0 796 aaKnown RBP28.62■■■□□ 2.17
ZFYVE1-209ENST00000556761 PROSER2Q86WR7 435 aaPredicted RBP28.61■■■□□ 2.17
ZFYVE1-209ENST00000556761 DIP2AQ14689 1571 aa28.6■■■□□ 2.17
ZFYVE1-209ENST00000556761 PIK3R4Q99570 1358 aa28.58■■■□□ 2.17
ZFYVE1-209ENST00000556761 RBM33Q96EV2 1170 aaKnown RBP28.56■■■□□ 2.16
ZFYVE1-209ENST00000556761 NRXN3Q9Y4C0 1643 aa28.55■■■□□ 2.16
ZFYVE1-209ENST00000556761 NEXMIFQ5QGS0 1516 aa28.55■■■□□ 2.16
ZFYVE1-209ENST00000556761 SETBP1Q9Y6X0 1596 aa28.54■■■□□ 2.16
ZFYVE1-209ENST00000556761 ZNF326Q5BKZ1 582 aaKnown RBP28.54■■■□□ 2.16
ZFYVE1-209ENST00000556761 KIF1BO60333 1816 aa28.53■■■□□ 2.16
ZFYVE1-209ENST00000556761 PTPRUQ92729 1446 aa28.52■■■□□ 2.16
ZFYVE1-209ENST00000556761 MPHOSPH9Q99550 1183 aa28.51■■■□□ 2.15
ZFYVE1-209ENST00000556761 DISP3Q9P2K9 1392 aa28.5■■■□□ 2.15
ZFYVE1-209ENST00000556761 FOXD1Q16676 465 aa28.5■■■□□ 2.15
ZFYVE1-209ENST00000556761 SETD5Q9C0A6 1442 aa28.5■■■□□ 2.15
ZFYVE1-209ENST00000556761 FAM135BQ49AJ0 1406 aa28.49■■■□□ 2.15
ZFYVE1-209ENST00000556761 NCOA3Q9Y6Q9 1424 aa28.49■■■□□ 2.15
ZFYVE1-209ENST00000556761 ACIN1Q9UKV3 1341 aaKnown RBP28.45■■■□□ 2.15
ZFYVE1-209ENST00000556761 AMOTL2Q9Y2J4 779 aa28.45■■■□□ 2.14
ZFYVE1-209ENST00000556761 MSH6P52701 1360 aa28.45■■■□□ 2.14
ZFYVE1-209ENST00000556761 RPGRIP1LQ68CZ1 1315 aa28.44■■■□□ 2.14
ZFYVE1-209ENST00000556761 METP08581 1390 aa28.43■■■□□ 2.14
ZFYVE1-209ENST00000556761 XRN1Q8IZH2 1706 aaKnown RBP28.42■■■□□ 2.14
ZFYVE1-209ENST00000556761 RAB3GAP2Q9H2M9 1393 aa28.39■■■□□ 2.14
ZFYVE1-209ENST00000556761 VGFO15240 615 aaPredicted RBP28.39■■■□□ 2.14
ZFYVE1-209ENST00000556761 SPATA31E1Q6ZUB1 1445 aa28.38■■■□□ 2.13
ZFYVE1-209ENST00000556761 SLAIN2Q9P270 581 aa28.38■■■□□ 2.13
ZFYVE1-209ENST00000556761 CCDC144AA2RUR9 1427 aa28.37■■■□□ 2.13
ZFYVE1-209ENST00000556761 PPLO60437 1756 aa28.37■■■□□ 2.13
ZFYVE1-209ENST00000556761 ILDR2Q71H61 639 aa28.36■■■□□ 2.13
ZFYVE1-209ENST00000556761 ROBO1Q9Y6N7 1651 aa28.35■■■□□ 2.13
ZFYVE1-209ENST00000556761 C19orf44Q9H6X5 657 aa28.35■■■□□ 2.13
ZFYVE1-209ENST00000556761 SETD1AO15047 1707 aaKnown RBP28.35■■■□□ 2.13
ZFYVE1-209ENST00000556761 MED1Q15648 1581 aaPredicted RBP28.34■■■□□ 2.13
ZFYVE1-209ENST00000556761 SIPA1L2Q9P2F8 1722 aaPredicted RBP28.33■■■□□ 2.13
ZFYVE1-209ENST00000556761 C14orf37Q86TY3 774 aa28.29■■■□□ 2.12
ZFYVE1-209ENST00000556761 CADPS2Q86UW7 1296 aa28.29■■■□□ 2.12
ZFYVE1-209ENST00000556761 HRCP23327 699 aa28.28■■■□□ 2.12
ZFYVE1-209ENST00000556761 DCCP43146 1447 aa28.26■■■□□ 2.12
ZFYVE1-209ENST00000556761 PRAG1Q86YV5 1406 aa28.26■■■□□ 2.12
ZFYVE1-209ENST00000556761 ADGRF5Q8IZF2 1346 aa28.26■■■□□ 2.11
ZFYVE1-209ENST00000556761 RGL3Q3MIN7 710 aa28.26■■■□□ 2.11
ZFYVE1-209ENST00000556761 ATF3P18847 181 aa28.25■■■□□ 2.11
ZFYVE1-209ENST00000556761 IFT172Q9UG01 1749 aa28.25■■■□□ 2.11
ZFYVE1-209ENST00000556761 ANKRD30BQ9BXX2 1392 aa28.24■■■□□ 2.11
ZFYVE1-209ENST00000556761 PTCH1Q13635 1447 aa28.23■■■□□ 2.11
ZFYVE1-209ENST00000556761 ADGRL3Q9HAR2 1447 aa28.21■■■□□ 2.11
ZFYVE1-209ENST00000556761 ROBO2Q9HCK4 1378 aa28.21■■■□□ 2.11
ZFYVE1-209ENST00000556761 MST1RQ04912 1400 aa28.18■■■□□ 2.1
ZFYVE1-209ENST00000556761 PHLPP1O60346 1717 aa28.16■■■□□ 2.1
ZFYVE1-209ENST00000556761 NALCNQ8IZF0 1738 aa28.16■■■□□ 2.1
ZFYVE1-209ENST00000556761 PIK3C2GO75747 1445 aa28.16■■■□□ 2.1
ZFYVE1-209ENST00000556761 COL16A1Q07092 1604 aaPredicted RBP28.15■■■□□ 2.1
ZFYVE1-209ENST00000556761 BRINP3Q76B58 766 aa28.15■■■□□ 2.1
ZFYVE1-209ENST00000556761 AHDC1Q5TGY3 1603 aaPredicted RBP28.14■■■□□ 2.1
ZFYVE1-209ENST00000556761 NRXN1Q9ULB1 1477 aa28.13■■■□□ 2.09
ZFYVE1-209ENST00000556761 ASXL1Q8IXJ9 1541 aa28.12■■■□□ 2.09
ZFYVE1-209ENST00000556761 TECPR2O15040 1411 aa28.1■■■□□ 2.09
ZFYVE1-209ENST00000556761 MYOM2P54296 1465 aa28.09■■■□□ 2.09
ZFYVE1-209ENST00000556761 LRPPRCP42704 1394 aaKnown RBP28.09■■■□□ 2.09
ZFYVE1-209ENST00000556761 JCADQ9P266 1359 aa28.09■■■□□ 2.09
ZFYVE1-209ENST00000556761 SOCS7O14512 581 aa28.08■■■□□ 2.09
ZFYVE1-209ENST00000556761 C14orf93Q9H972 538 aaKnown RBP28.07■■■□□ 2.08
ZFYVE1-209ENST00000556761 RGS17Q9UGC6 210 aaPredicted RBP28.07■■■□□ 2.08
ZFYVE1-209ENST00000556761 ABCC11Q96J66 1382 aa28.07■■■□□ 2.08
ZFYVE1-209ENST00000556761 TMEM132EQ6IEE7 984 aa28.05■■■□□ 2.08
ZFYVE1-209ENST00000556761 PHF23Q9BUL5 403 aaPredicted RBP28.05■■■□□ 2.08
ZFYVE1-209ENST00000556761 C1orf167Q5SNV9 1468 aa28.04■■■□□ 2.08
ZFYVE1-209ENST00000556761 NHSL1Q5SYE7 1610 aa28.02■■■□□ 2.08
ZFYVE1-209ENST00000556761 KNDC1Q76NI1 1749 aa28.01■■■□□ 2.07
ZFYVE1-209ENST00000556761 STK26Q9P289 416 aa28.01■■■□□ 2.07
ZFYVE1-209ENST00000556761 YTHDC2Q9H6S0 1430 aaKnown RBP28.01■■■□□ 2.07
ZFYVE1-209ENST00000556761 CFAP70Q5T0N1 1121 aa28■■■□□ 2.07
ZFYVE1-209ENST00000556761 WAPLQ7Z5K2 1190 aa27.99■■■□□ 2.07
ZFYVE1-209ENST00000556761 SIRT1Q96EB6 747 aa27.99■■■□□ 2.07
ZFYVE1-209ENST00000556761 CDC42BPGQ6DT37 1551 aa27.97■■■□□ 2.07
ZFYVE1-209ENST00000556761 PLEKHH1Q9ULM0 1364 aa27.97■■■□□ 2.07
ZFYVE1-209ENST00000556761 SHPRHQ149N8 1683 aa27.97■■■□□ 2.07
Retrieved 100 of 20,778 RNA–protein pairs in 315.7 ms