RNA–Protein interactions for RNA: ENST00000556742.1

IFT43-212, Transcript of intraflagellar transport 43, humanhuman

TSL 2 BASIC

Gene IFT43, Length 848 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IFT43-212ENST00000556742 SETD5Q9C0A6 1442 aa16.08■□□□□ 0.16
IFT43-212ENST00000556742 TRIM52Q96A61 297 aa16.07■□□□□ 0.16
IFT43-212ENST00000556742 ILDR1Q86SU0 546 aaPredicted RBP16.06■□□□□ 0.16
IFT43-212ENST00000556742 SLC4A1APQ9BWU0 796 aaKnown RBP16.04■□□□□ 0.16
IFT43-212ENST00000556742 RIMS2Q9UQ26 1411 aa16.03■□□□□ 0.16
IFT43-212ENST00000556742 HDGFP51858 240 aaKnown RBP16.03■□□□□ 0.16
IFT43-212ENST00000556742 CHD2O14647 1828 aaKnown RBP16.02■□□□□ 0.16
IFT43-212ENST00000556742 ABCF1Q8NE71 845 aaKnown RBP eCLIP16.01■□□□□ 0.15
IFT43-212ENST00000556742 XIRP1Q702N8 1843 aaKnown RBP16.01■□□□□ 0.15
IFT43-212ENST00000556742 RAB3GAP2Q9H2M9 1393 aa16■□□□□ 0.15
IFT43-212ENST00000556742 PLEKHG1Q9ULL1 1385 aa16■□□□□ 0.15
IFT43-212ENST00000556742 DIP2AQ14689 1571 aa16■□□□□ 0.15
IFT43-212ENST00000556742 CHGAP10645 457 aaKnown RBP15.99■□□□□ 0.15
IFT43-212ENST00000556742 NWD1Q149M9 1564 aa15.99■□□□□ 0.15
IFT43-212ENST00000556742 PPLO60437 1756 aa15.98■□□□□ 0.15
IFT43-212ENST00000556742 MPHOSPH9Q99550 1183 aa15.98■□□□□ 0.15
IFT43-212ENST00000556742 NEXMIFQ5QGS0 1516 aa15.98■□□□□ 0.15
IFT43-212ENST00000556742 HRCP23327 699 aa15.97■□□□□ 0.15
IFT43-212ENST00000556742 LRRC7Q96NW7 1537 aa15.96■□□□□ 0.15
IFT43-212ENST00000556742 PPP1R15AO75807 674 aaPredicted RBP15.96■□□□□ 0.15
IFT43-212ENST00000556742 NRXN3Q9Y4C0 1643 aa15.96■□□□□ 0.15
IFT43-212ENST00000556742 IFT172Q9UG01 1749 aa15.96■□□□□ 0.15
IFT43-212ENST00000556742 SETBP1Q9Y6X0 1596 aa15.96■□□□□ 0.14
IFT43-212ENST00000556742 NKTRP30414 1462 aaKnown RBP15.94■□□□□ 0.14
IFT43-212ENST00000556742 CCDC144AA2RUR9 1427 aa15.94■□□□□ 0.14
IFT43-212ENST00000556742 SLC26A8Q96RN1 970 aa15.93■□□□□ 0.14
IFT43-212ENST00000556742 ADAMTS13Q76LX8 1427 aa15.93■□□□□ 0.14
IFT43-212ENST00000556742 ZNF326Q5BKZ1 582 aaKnown RBP15.92■□□□□ 0.14
IFT43-212ENST00000556742 TBX22Q9Y458 520 aa15.92■□□□□ 0.14
IFT43-212ENST00000556742 PIK3R4Q99570 1358 aa15.91■□□□□ 0.14
IFT43-212ENST00000556742 KCNA6P17658 529 aa15.91■□□□□ 0.14
IFT43-212ENST00000556742 FOXD1Q16676 465 aa15.91■□□□□ 0.14
IFT43-212ENST00000556742 BCANQ96GW7 911 aa15.91■□□□□ 0.14
IFT43-212ENST00000556742 SETD1AO15047 1707 aaKnown RBP15.91■□□□□ 0.14
IFT43-212ENST00000556742 RPGRIP1LQ68CZ1 1315 aa15.9■□□□□ 0.14
IFT43-212ENST00000556742 SPATA31E1Q6ZUB1 1445 aa15.88■□□□□ 0.13
IFT43-212ENST00000556742 ALKQ9UM73 1620 aa15.88■□□□□ 0.13
IFT43-212ENST00000556742 NUTM2DQ5VT03 806 aaPredicted RBP15.88■□□□□ 0.13
IFT43-212ENST00000556742 XRN1Q8IZH2 1706 aaKnown RBP15.88■□□□□ 0.13
IFT43-212ENST00000556742 UBAP1LF5GYI3 381 aa15.87■□□□□ 0.13
IFT43-212ENST00000556742 VGFO15240 615 aaPredicted RBP15.85■□□□□ 0.13
IFT43-212ENST00000556742 TOM1O60784 492 aa15.85■□□□□ 0.13
IFT43-212ENST00000556742 TMEM94Q12767 1356 aa15.83■□□□□ 0.12
IFT43-212ENST00000556742 ANKRD30BQ9BXX2 1392 aa15.83■□□□□ 0.12
IFT43-212ENST00000556742 NCOA3Q9Y6Q9 1424 aa15.83■□□□□ 0.12
IFT43-212ENST00000556742 PROSER2Q86WR7 435 aaPredicted RBP15.81■□□□□ 0.12
IFT43-212ENST00000556742 LAMC1P11047 1609 aa15.8■□□□□ 0.12
IFT43-212ENST00000556742 PTPRUQ92729 1446 aa15.8■□□□□ 0.12
IFT43-212ENST00000556742 SIPA1L2Q9P2F8 1722 aaPredicted RBP15.8■□□□□ 0.12
IFT43-212ENST00000556742 MYOM2P54296 1465 aa15.78■□□□□ 0.12
IFT43-212ENST00000556742 PRAG1Q86YV5 1406 aa15.78■□□□□ 0.12
IFT43-212ENST00000556742 METP08581 1390 aa15.78■□□□□ 0.12
IFT43-212ENST00000556742 RGL3Q3MIN7 710 aa15.77■□□□□ 0.12
IFT43-212ENST00000556742 AMOTL2Q9Y2J4 779 aa15.77■□□□□ 0.12
IFT43-212ENST00000556742 KNDC1Q76NI1 1749 aa15.77■□□□□ 0.11
IFT43-212ENST00000556742 PIK3C2GO75747 1445 aa15.77■□□□□ 0.11
IFT43-212ENST00000556742 MSH6P52701 1360 aa15.76■□□□□ 0.11
IFT43-212ENST00000556742 NRXN1Q9ULB1 1477 aa15.76■□□□□ 0.11
IFT43-212ENST00000556742 NALCNQ8IZF0 1738 aa15.75■□□□□ 0.11
IFT43-212ENST00000556742 ROBO1Q9Y6N7 1651 aa15.75■□□□□ 0.11
IFT43-212ENST00000556742 PTCH1Q13635 1447 aa15.75■□□□□ 0.11
IFT43-212ENST00000556742 ADGRF5Q8IZF2 1346 aa15.74■□□□□ 0.11
IFT43-212ENST00000556742 PIP4K2BP78356 416 aa15.74■□□□□ 0.11
IFT43-212ENST00000556742 SCAF1Q9H7N4 1312 aaKnown RBP15.73■□□□□ 0.11
IFT43-212ENST00000556742 DCCP43146 1447 aa15.73■□□□□ 0.11
IFT43-212ENST00000556742 FAM135BQ49AJ0 1406 aa15.72■□□□□ 0.11
IFT43-212ENST00000556742 TRIM26Q12899 539 aaPredicted RBP15.72■□□□□ 0.11
IFT43-212ENST00000556742 RBM33Q96EV2 1170 aaKnown RBP15.72■□□□□ 0.11
IFT43-212ENST00000556742 STAC3Q96MF2 364 aa15.71■□□□□ 0.11
IFT43-212ENST00000556742 C19orf44Q9H6X5 657 aa15.71■□□□□ 0.11
IFT43-212ENST00000556742 ASXL1Q8IXJ9 1541 aa15.71■□□□□ 0.11
IFT43-212ENST00000556742 TECPR2O15040 1411 aa15.69■□□□□ 0.1
IFT43-212ENST00000556742 ADGRL3Q9HAR2 1447 aa15.68■□□□□ 0.1
IFT43-212ENST00000556742 C14orf37Q86TY3 774 aa15.68■□□□□ 0.1
IFT43-212ENST00000556742 CADPS2Q86UW7 1296 aa15.68■□□□□ 0.1
IFT43-212ENST00000556742 HSPA1LP34931 641 aa15.67■□□□□ 0.1
IFT43-212ENST00000556742 SLAIN2Q9P270 581 aa15.67■□□□□ 0.1
IFT43-212ENST00000556742 KIAA1210Q9ULL0 1709 aa15.67■□□□□ 0.1
IFT43-212ENST00000556742 PHLPP1O60346 1717 aa15.66■□□□□ 0.1
IFT43-212ENST00000556742 ROBO2Q9HCK4 1378 aa15.66■□□□□ 0.1
IFT43-212ENST00000556742 C14orf93Q9H972 538 aaKnown RBP15.66■□□□□ 0.1
IFT43-212ENST00000556742 LRPPRCP42704 1394 aaKnown RBP15.65■□□□□ 0.1
IFT43-212ENST00000556742 DHX57Q6P158 1386 aaKnown RBP15.65■□□□□ 0.1
IFT43-212ENST00000556742 ABCC11Q96J66 1382 aa15.65■□□□□ 0.1
IFT43-212ENST00000556742 ATF3P18847 181 aa15.65■□□□□ 0.1
IFT43-212ENST00000556742 CDC42BPGQ6DT37 1551 aa15.64■□□□□ 0.09
IFT43-212ENST00000556742 YTHDC2Q9H6S0 1430 aaKnown RBP15.64■□□□□ 0.09
IFT43-212ENST00000556742 ADGRB1O14514 1584 aa15.63■□□□□ 0.09
IFT43-212ENST00000556742 DCAF11Q8TEB1 546 aa15.63■□□□□ 0.09
IFT43-212ENST00000556742 MST1RQ04912 1400 aa15.62■□□□□ 0.09
IFT43-212ENST00000556742 NHSL1Q5SYE7 1610 aa15.62■□□□□ 0.09
IFT43-212ENST00000556742 AHDC1Q5TGY3 1603 aaPredicted RBP15.62■□□□□ 0.09
IFT43-212ENST00000556742 DLC1Q96QB1 1528 aa15.62■□□□□ 0.09
IFT43-212ENST00000556742 CFAP70Q5T0N1 1121 aa15.61■□□□□ 0.09
IFT43-212ENST00000556742 COL16A1Q07092 1604 aaPredicted RBP15.61■□□□□ 0.09
IFT43-212ENST00000556742 TMEM132EQ6IEE7 984 aa15.6■□□□□ 0.09
IFT43-212ENST00000556742 SIRT1Q96EB6 747 aa15.6■□□□□ 0.09
IFT43-212ENST00000556742 ARHGEF28Q8N1W1 1705 aaKnown RBP15.59■□□□□ 0.09
IFT43-212ENST00000556742 FMN2Q9NZ56 1722 aa15.59■□□□□ 0.09
IFT43-212ENST00000556742 KDM2AQ9Y2K7 1162 aa15.58■□□□□ 0.08
Retrieved 100 of 20,778 RNA–protein pairs in 23.4 ms