RNA–Protein interactions for RNA: ENST00000556536.5

TUBB3-211, Transcript of tubulin beta 3 class III, humanhuman

TSL 3

Gene TUBB3, Length 925 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TUBB3-211ENST00000556536 NCKAP5LQ9HCH0 1330 aa25.26■■□□□ 1.63
TUBB3-211ENST00000556536 ZNF335Q9H4Z2 1342 aaPredicted RBP25.25■■□□□ 1.63
TUBB3-211ENST00000556536 UBAP1LF5GYI3 381 aa25.23■■□□□ 1.63
TUBB3-211ENST00000556536 TMEM2Q9UHN6 1383 aa25.22■■□□□ 1.63
TUBB3-211ENST00000556536 KIF1BO60333 1816 aa25.22■■□□□ 1.63
TUBB3-211ENST00000556536 KDM5AP29375 1690 aaKnown RBP25.22■■□□□ 1.63
TUBB3-211ENST00000556536 NEURL4Q96JN8 1562 aa25.22■■□□□ 1.63
TUBB3-211ENST00000556536 RIMS2Q9UQ26 1411 aa25.2■■□□□ 1.62
TUBB3-211ENST00000556536 ARHGAP23Q9P227 1491 aa25.19■■□□□ 1.62
TUBB3-211ENST00000556536 MYO5BQ9ULV0 1848 aa25.19■■□□□ 1.62
TUBB3-211ENST00000556536 RPGRIP1LQ68CZ1 1315 aa25.18■■□□□ 1.62
TUBB3-211ENST00000556536 NUTM2DQ5VT03 806 aaPredicted RBP25.18■■□□□ 1.62
TUBB3-211ENST00000556536 L3MBTL2Q969R5 705 aa25.18■■□□□ 1.62
TUBB3-211ENST00000556536 ZFYVE9O95405 1425 aa25.18■■□□□ 1.62
TUBB3-211ENST00000556536 SLIT1O75093 1534 aa25.17■■□□□ 1.62
TUBB3-211ENST00000556536 LTKP29376 864 aa25.16■■□□□ 1.62
TUBB3-211ENST00000556536 NEXMIFQ5QGS0 1516 aa25.16■■□□□ 1.62
TUBB3-211ENST00000556536 TONSLQ96HA7 1378 aa25.16■■□□□ 1.62
TUBB3-211ENST00000556536 DCAF11Q8TEB1 546 aa25.15■■□□□ 1.62
TUBB3-211ENST00000556536 TXNDC2Q86VQ3 553 aa25.14■■□□□ 1.62
TUBB3-211ENST00000556536 KDM2AQ9Y2K7 1162 aa25.13■■□□□ 1.61
TUBB3-211ENST00000556536 ANKLE2Q86XL3 938 aa25.12■■□□□ 1.61
TUBB3-211ENST00000556536 ABCF1Q8NE71 845 aaKnown RBP eCLIP25.12■■□□□ 1.61
TUBB3-211ENST00000556536 EID1Q9Y6B2 187 aa25.12■■□□□ 1.61
TUBB3-211ENST00000556536 PPP1R15AO75807 674 aaPredicted RBP25.1■■□□□ 1.61
TUBB3-211ENST00000556536 HDGFP51858 240 aaKnown RBP25.1■■□□□ 1.61
TUBB3-211ENST00000556536 ADGRF5Q8IZF2 1346 aa25.1■■□□□ 1.61
TUBB3-211ENST00000556536 SCAF11Q99590 1463 aaKnown RBP25.09■■□□□ 1.61
TUBB3-211ENST00000556536 SENP3Q9H4L4 574 aaPredicted RBP25.09■■□□□ 1.61
TUBB3-211ENST00000556536 VGFO15240 615 aaPredicted RBP25.08■■□□□ 1.61
TUBB3-211ENST00000556536 TIMELESSQ9UNS1 1208 aa25.08■■□□□ 1.61
TUBB3-211ENST00000556536 IFT172Q9UG01 1749 aa25.06■■□□□ 1.6
TUBB3-211ENST00000556536 PPLO60437 1756 aa25.06■■□□□ 1.6
TUBB3-211ENST00000556536 MYOM2P54296 1465 aa25.06■■□□□ 1.6
TUBB3-211ENST00000556536 PLEKHG1Q9ULL1 1385 aa25.04■■□□□ 1.6
TUBB3-211ENST00000556536 STAC3Q96MF2 364 aa25.03■■□□□ 1.6
TUBB3-211ENST00000556536 NRXN1Q9ULB1 1477 aa25.02■■□□□ 1.6
TUBB3-211ENST00000556536 CPS1P31327 1500 aa25.02■■□□□ 1.6
TUBB3-211ENST00000556536 BCANQ96GW7 911 aa25■■□□□ 1.59
TUBB3-211ENST00000556536 SCAF1Q9H7N4 1312 aaKnown RBP25■■□□□ 1.59
TUBB3-211ENST00000556536 NPHP4O75161 1426 aaPredicted RBP25■■□□□ 1.59
TUBB3-211ENST00000556536 MED14O60244 1454 aa25■■□□□ 1.59
TUBB3-211ENST00000556536 POLR1AO95602 1720 aaPredicted RBP25■■□□□ 1.59
TUBB3-211ENST00000556536 TOM1O60784 492 aa24.99■■□□□ 1.59
TUBB3-211ENST00000556536 PIK3C2GO75747 1445 aa24.99■■□□□ 1.59
TUBB3-211ENST00000556536 NBPF8Q3BBV2 869 aa24.99■■□□□ 1.59
TUBB3-211ENST00000556536 PRAG1Q86YV5 1406 aa24.99■■□□□ 1.59
TUBB3-211ENST00000556536 MED1Q15648 1581 aaPredicted RBP24.98■■□□□ 1.59
TUBB3-211ENST00000556536 HSPA1LP34931 641 aa24.98■■□□□ 1.59
TUBB3-211ENST00000556536 PIP4K2BP78356 416 aa24.97■■□□□ 1.59
TUBB3-211ENST00000556536 SLC26A8Q96RN1 970 aa24.96■■□□□ 1.59
TUBB3-211ENST00000556536 ADAMTS13Q76LX8 1427 aa24.95■■□□□ 1.59
TUBB3-211ENST00000556536 SETBP1Q9Y6X0 1596 aa24.95■■□□□ 1.58
TUBB3-211ENST00000556536 CFAP70Q5T0N1 1121 aa24.94■■□□□ 1.58
TUBB3-211ENST00000556536 NRXN3Q9Y4C0 1643 aa24.94■■□□□ 1.58
TUBB3-211ENST00000556536 C14orf93Q9H972 538 aaKnown RBP24.93■■□□□ 1.58
TUBB3-211ENST00000556536 IQGAP1P46940 1657 aa24.91■■□□□ 1.58
TUBB3-211ENST00000556536 ALKQ9UM73 1620 aa24.9■■□□□ 1.58
TUBB3-211ENST00000556536 TBX22Q9Y458 520 aa24.9■■□□□ 1.58
TUBB3-211ENST00000556536 NBPF1Q3BBV0 1214 aa24.88■■□□□ 1.57
TUBB3-211ENST00000556536 METP08581 1390 aa24.88■■□□□ 1.57
TUBB3-211ENST00000556536 TMEM132EQ6IEE7 984 aa24.86■■□□□ 1.57
TUBB3-211ENST00000556536 ZEB1P37275 1124 aaPredicted RBP24.84■■□□□ 1.57
TUBB3-211ENST00000556536 ASXL1Q8IXJ9 1541 aa24.84■■□□□ 1.57
TUBB3-211ENST00000556536 DIP2AQ14689 1571 aa24.84■■□□□ 1.57
TUBB3-211ENST00000556536 SETD1AO15047 1707 aaKnown RBP24.82■■□□□ 1.56
TUBB3-211ENST00000556536 RALGAPBQ86X10 1494 aa24.82■■□□□ 1.56
TUBB3-211ENST00000556536 ADGRB1O14514 1584 aa24.81■■□□□ 1.56
TUBB3-211ENST00000556536 PHF23Q9BUL5 403 aaPredicted RBP24.81■■□□□ 1.56
TUBB3-211ENST00000556536 TRPM1Q7Z4N2 1603 aa24.81■■□□□ 1.56
TUBB3-211ENST00000556536 PTPRUQ92729 1446 aa24.8■■□□□ 1.56
TUBB3-211ENST00000556536 LAMC1P11047 1609 aa24.8■■□□□ 1.56
TUBB3-211ENST00000556536 ROCK2O75116 1388 aaKnown RBP24.8■■□□□ 1.56
TUBB3-211ENST00000556536 KIAA1210Q9ULL0 1709 aa24.78■■□□□ 1.56
TUBB3-211ENST00000556536 PIK3R4Q99570 1358 aa24.78■■□□□ 1.56
TUBB3-211ENST00000556536 STK26Q9P289 416 aa24.77■■□□□ 1.56
TUBB3-211ENST00000556536 GPRASP1Q5JY77 1395 aa24.77■■□□□ 1.56
TUBB3-211ENST00000556536 AMOTL2Q9Y2J4 779 aa24.76■■□□□ 1.55
TUBB3-211ENST00000556536 YTHDC2Q9H6S0 1430 aaKnown RBP24.76■■□□□ 1.55
TUBB3-211ENST00000556536 LRPPRCP42704 1394 aaKnown RBP24.75■■□□□ 1.55
TUBB3-211ENST00000556536 KCNA6P17658 529 aa24.74■■□□□ 1.55
TUBB3-211ENST00000556536 CARD11Q9BXL7 1154 aa24.74■■□□□ 1.55
TUBB3-211ENST00000556536 TRAK1Q9UPV9 953 aa24.72■■□□□ 1.55
TUBB3-211ENST00000556536 LRRC7Q96NW7 1537 aa24.71■■□□□ 1.55
TUBB3-211ENST00000556536 ABCC11Q96J66 1382 aa24.71■■□□□ 1.55
TUBB3-211ENST00000556536 STRCP1A6NGW2 1772 aa24.69■■□□□ 1.54
TUBB3-211ENST00000556536 NWD1Q149M9 1564 aa24.68■■□□□ 1.54
TUBB3-211ENST00000556536 TECPR2O15040 1411 aa24.68■■□□□ 1.54
TUBB3-211ENST00000556536 ROBO2Q9HCK4 1378 aa24.67■■□□□ 1.54
TUBB3-211ENST00000556536 XRN1Q8IZH2 1706 aaKnown RBP24.67■■□□□ 1.54
TUBB3-211ENST00000556536 CHD2O14647 1828 aaKnown RBP24.66■■□□□ 1.54
TUBB3-211ENST00000556536 WAPLQ7Z5K2 1190 aa24.64■■□□□ 1.54
TUBB3-211ENST00000556536 PTCH1Q13635 1447 aa24.63■■□□□ 1.53
TUBB3-211ENST00000556536 RBM33Q96EV2 1170 aaKnown RBP24.63■■□□□ 1.53
TUBB3-211ENST00000556536 PRAM1Q96QH2 718 aa24.63■■□□□ 1.53
TUBB3-211ENST00000556536 PLEKHH1Q9ULM0 1364 aa24.63■■□□□ 1.53
TUBB3-211ENST00000556536 DLC1Q96QB1 1528 aa24.62■■□□□ 1.53
TUBB3-211ENST00000556536 SIRT1Q96EB6 747 aa24.62■■□□□ 1.53
TUBB3-211ENST00000556536 NKTRP30414 1462 aaKnown RBP24.62■■□□□ 1.53
TUBB3-211ENST00000556536 PROSER2Q86WR7 435 aaPredicted RBP24.61■■□□□ 1.53
Retrieved 100 of 20,778 RNA–protein pairs in 127.5 ms