RNA–Protein interactions for RNA: ENST00000556203.1

ACTN1-217, Transcript of actinin alpha 1, humanhuman

TSL 3

Gene ACTN1, Length 564 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN1-217ENST00000556203 HDGFP51858 240 aaKnown RBP22.58■■□□□ 1.21
ACTN1-217ENST00000556203 PPP1R15AO75807 674 aaPredicted RBP22.57■■□□□ 1.2
ACTN1-217ENST00000556203 NUTM2DQ5VT03 806 aaPredicted RBP22.56■■□□□ 1.2
ACTN1-217ENST00000556203 ABCF1Q8NE71 845 aaKnown RBP eCLIP22.55■■□□□ 1.2
ACTN1-217ENST00000556203 BCANQ96GW7 911 aa22.55■■□□□ 1.2
ACTN1-217ENST00000556203 CLTCL1P53675 1640 aa22.55■■□□□ 1.2
ACTN1-217ENST00000556203 MYO5BQ9ULV0 1848 aa22.54■■□□□ 1.2
ACTN1-217ENST00000556203 SENP3Q9H4L4 574 aaPredicted RBP22.54■■□□□ 1.2
ACTN1-217ENST00000556203 ZNF326Q5BKZ1 582 aaKnown RBP22.53■■□□□ 1.2
ACTN1-217ENST00000556203 SLC26A8Q96RN1 970 aa22.53■■□□□ 1.2
ACTN1-217ENST00000556203 PLEKHG1Q9ULL1 1385 aa22.52■■□□□ 1.2
ACTN1-217ENST00000556203 CPS1P31327 1500 aa22.52■■□□□ 1.19
ACTN1-217ENST00000556203 IQSEC2Q5JU85 1478 aa22.5■■□□□ 1.19
ACTN1-217ENST00000556203 HRCP23327 699 aa22.49■■□□□ 1.19
ACTN1-217ENST00000556203 CCDC144AA2RUR9 1427 aa22.47■■□□□ 1.19
ACTN1-217ENST00000556203 KCNA6P17658 529 aa22.43■■□□□ 1.18
ACTN1-217ENST00000556203 ADAMTS13Q76LX8 1427 aa22.42■■□□□ 1.18
ACTN1-217ENST00000556203 TBX22Q9Y458 520 aa22.42■■□□□ 1.18
ACTN1-217ENST00000556203 STRCP1A6NGW2 1772 aa22.42■■□□□ 1.18
ACTN1-217ENST00000556203 NEXMIFQ5QGS0 1516 aa22.41■■□□□ 1.18
ACTN1-217ENST00000556203 LRRC7Q96NW7 1537 aa22.41■■□□□ 1.18
ACTN1-217ENST00000556203 KIF1BO60333 1816 aa22.41■■□□□ 1.18
ACTN1-217ENST00000556203 RPGRIP1LQ68CZ1 1315 aa22.39■■□□□ 1.18
ACTN1-217ENST00000556203 UBAP1LF5GYI3 381 aa22.39■■□□□ 1.17
ACTN1-217ENST00000556203 RGL3Q3MIN7 710 aa22.37■■□□□ 1.17
ACTN1-217ENST00000556203 VGFO15240 615 aaPredicted RBP22.36■■□□□ 1.17
ACTN1-217ENST00000556203 SPATA31E1Q6ZUB1 1445 aa22.36■■□□□ 1.17
ACTN1-217ENST00000556203 DIP2AQ14689 1571 aa22.36■■□□□ 1.17
ACTN1-217ENST00000556203 SETBP1Q9Y6X0 1596 aa22.35■■□□□ 1.17
ACTN1-217ENST00000556203 NWD1Q149M9 1564 aa22.34■■□□□ 1.17
ACTN1-217ENST00000556203 ANKRD30BQ9BXX2 1392 aa22.34■■□□□ 1.17
ACTN1-217ENST00000556203 PROSER2Q86WR7 435 aaPredicted RBP22.33■■□□□ 1.17
ACTN1-217ENST00000556203 PIK3R4Q99570 1358 aa22.33■■□□□ 1.17
ACTN1-217ENST00000556203 NRXN3Q9Y4C0 1643 aa22.32■■□□□ 1.16
ACTN1-217ENST00000556203 TOM1O60784 492 aa22.32■■□□□ 1.16
ACTN1-217ENST00000556203 TMEM94Q12767 1356 aa22.32■■□□□ 1.16
ACTN1-217ENST00000556203 NKTRP30414 1462 aaKnown RBP22.32■■□□□ 1.16
ACTN1-217ENST00000556203 RBM33Q96EV2 1170 aaKnown RBP22.31■■□□□ 1.16
ACTN1-217ENST00000556203 TRIM26Q12899 539 aaPredicted RBP22.3■■□□□ 1.16
ACTN1-217ENST00000556203 METP08581 1390 aa22.29■■□□□ 1.16
ACTN1-217ENST00000556203 AMOTL2Q9Y2J4 779 aa22.28■■□□□ 1.16
ACTN1-217ENST00000556203 PTPRUQ92729 1446 aa22.28■■□□□ 1.16
ACTN1-217ENST00000556203 ADGRF5Q8IZF2 1346 aa22.28■■□□□ 1.16
ACTN1-217ENST00000556203 PIP4K2BP78356 416 aa22.27■■□□□ 1.16
ACTN1-217ENST00000556203 PPLO60437 1756 aa22.27■■□□□ 1.16
ACTN1-217ENST00000556203 SCAF1Q9H7N4 1312 aaKnown RBP22.27■■□□□ 1.16
ACTN1-217ENST00000556203 CHD2O14647 1828 aaKnown RBP22.26■■□□□ 1.15
ACTN1-217ENST00000556203 ALKQ9UM73 1620 aa22.23■■□□□ 1.15
ACTN1-217ENST00000556203 XIRP1Q702N8 1843 aaKnown RBP22.22■■□□□ 1.15
ACTN1-217ENST00000556203 C14orf37Q86TY3 774 aa22.2■■□□□ 1.14
ACTN1-217ENST00000556203 MSH6P52701 1360 aa22.2■■□□□ 1.14
ACTN1-217ENST00000556203 IFT172Q9UG01 1749 aa22.18■■□□□ 1.14
ACTN1-217ENST00000556203 PIK3C2GO75747 1445 aa22.18■■□□□ 1.14
ACTN1-217ENST00000556203 NCOA3Q9Y6Q9 1424 aa22.18■■□□□ 1.14
ACTN1-217ENST00000556203 XRN1Q8IZH2 1706 aaKnown RBP22.17■■□□□ 1.14
ACTN1-217ENST00000556203 MYOM2P54296 1465 aa22.16■■□□□ 1.14
ACTN1-217ENST00000556203 SETD1AO15047 1707 aaKnown RBP22.15■■□□□ 1.14
ACTN1-217ENST00000556203 NRXN1Q9ULB1 1477 aa22.14■■□□□ 1.13
ACTN1-217ENST00000556203 DCAF11Q8TEB1 546 aa22.13■■□□□ 1.13
ACTN1-217ENST00000556203 C19orf44Q9H6X5 657 aa22.13■■□□□ 1.13
ACTN1-217ENST00000556203 KDM2AQ9Y2K7 1162 aa22.13■■□□□ 1.13
ACTN1-217ENST00000556203 HSPA1LP34931 641 aa22.12■■□□□ 1.13
ACTN1-217ENST00000556203 ROBO2Q9HCK4 1378 aa22.12■■□□□ 1.13
ACTN1-217ENST00000556203 C14orf93Q9H972 538 aaKnown RBP22.11■■□□□ 1.13
ACTN1-217ENST00000556203 PTCH1Q13635 1447 aa22.11■■□□□ 1.13
ACTN1-217ENST00000556203 DHX57Q6P158 1386 aaKnown RBP22.11■■□□□ 1.13
ACTN1-217ENST00000556203 CFAP70Q5T0N1 1121 aa22.1■■□□□ 1.13
ACTN1-217ENST00000556203 TMEM132EQ6IEE7 984 aa22.1■■□□□ 1.13
ACTN1-217ENST00000556203 PRAG1Q86YV5 1406 aa22.09■■□□□ 1.13
ACTN1-217ENST00000556203 ATF3P18847 181 aa22.09■■□□□ 1.13
ACTN1-217ENST00000556203 CADPS2Q86UW7 1296 aa22.09■■□□□ 1.13
ACTN1-217ENST00000556203 SLAIN2Q9P270 581 aa22.09■■□□□ 1.13
ACTN1-217ENST00000556203 STK26Q9P289 416 aa22.09■■□□□ 1.13
ACTN1-217ENST00000556203 FAM135BQ49AJ0 1406 aa22.07■■□□□ 1.12
ACTN1-217ENST00000556203 ASXL1Q8IXJ9 1541 aa22.07■■□□□ 1.12
ACTN1-217ENST00000556203 STAC3Q96MF2 364 aa22.07■■□□□ 1.12
ACTN1-217ENST00000556203 LRPPRCP42704 1394 aaKnown RBP22.07■■□□□ 1.12
ACTN1-217ENST00000556203 ADGRL3Q9HAR2 1447 aa22.05■■□□□ 1.12
ACTN1-217ENST00000556203 ABCC11Q96J66 1382 aa22.04■■□□□ 1.12
ACTN1-217ENST00000556203 SIPA1L2Q9P2F8 1722 aaPredicted RBP22.04■■□□□ 1.12
ACTN1-217ENST00000556203 SIN3AQ96ST3 1273 aa22.04■■□□□ 1.12
ACTN1-217ENST00000556203 DCCP43146 1447 aa22.04■■□□□ 1.12
ACTN1-217ENST00000556203 YTHDC2Q9H6S0 1430 aaKnown RBP22.04■■□□□ 1.12
ACTN1-217ENST00000556203 TECPR2O15040 1411 aa22.03■■□□□ 1.12
ACTN1-217ENST00000556203 NEUROD1Q13562 356 aa22.01■■□□□ 1.11
ACTN1-217ENST00000556203 LAMC1P11047 1609 aa22.01■■□□□ 1.11
ACTN1-217ENST00000556203 WAPLQ7Z5K2 1190 aa22■■□□□ 1.11
ACTN1-217ENST00000556203 ROBO1Q9Y6N7 1651 aa21.99■■□□□ 1.11
ACTN1-217ENST00000556203 PLEKHH1Q9ULM0 1364 aa21.98■■□□□ 1.11
ACTN1-217ENST00000556203 NALCNQ8IZF0 1738 aa21.97■■□□□ 1.11
ACTN1-217ENST00000556203 MST1RQ04912 1400 aa21.97■■□□□ 1.11
ACTN1-217ENST00000556203 ADGRB1O14514 1584 aa21.96■■□□□ 1.11
ACTN1-217ENST00000556203 L3MBTL2Q969R5 705 aa21.96■■□□□ 1.11
ACTN1-217ENST00000556203 SIRT1Q96EB6 747 aa21.96■■□□□ 1.11
ACTN1-217ENST00000556203 PCGF6Q9BYE7 350 aa21.96■■□□□ 1.11
ACTN1-217ENST00000556203 KNDC1Q76NI1 1749 aa21.95■■□□□ 1.1
ACTN1-217ENST00000556203 BRINP3Q76B58 766 aa21.94■■□□□ 1.1
ACTN1-217ENST00000556203 PRAM1Q96QH2 718 aa21.92■■□□□ 1.1
ACTN1-217ENST00000556203 TRAK1Q9UPV9 953 aa21.92■■□□□ 1.1
ACTN1-217ENST00000556203 C1orf167Q5SNV9 1468 aa21.9■■□□□ 1.1
Retrieved 100 of 20,778 RNA–protein pairs in 41.3 ms