RNA–Protein interactions for RNA: ENST00000555436.1

CBLN3-202, Transcript of cerebellin 3 precursor, humanhuman

TSL 3 BASIC

Gene CBLN3, Length 718 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBLN3-202ENST00000555436 SCAF1Q9H7N4 1312 aaKnown RBP29.39■■■□□ 2.3
CBLN3-202ENST00000555436 PLEKHG1Q9ULL1 1385 aa29.39■■■□□ 2.29
CBLN3-202ENST00000555436 PPP1R15AO75807 674 aaPredicted RBP29.38■■■□□ 2.29
CBLN3-202ENST00000555436 KCNA6P17658 529 aa29.38■■■□□ 2.29
CBLN3-202ENST00000555436 ABCF1Q8NE71 845 aaKnown RBP eCLIP29.37■■■□□ 2.29
CBLN3-202ENST00000555436 BCANQ96GW7 911 aa29.37■■■□□ 2.29
CBLN3-202ENST00000555436 ALKQ9UM73 1620 aa29.35■■■□□ 2.29
CBLN3-202ENST00000555436 MYO5BQ9ULV0 1848 aa29.35■■■□□ 2.29
CBLN3-202ENST00000555436 HSPA1LP34931 641 aa29.3■■■□□ 2.28
CBLN3-202ENST00000555436 SENP3Q9H4L4 574 aaPredicted RBP29.3■■■□□ 2.28
CBLN3-202ENST00000555436 TMEM94Q12767 1356 aa29.28■■■□□ 2.28
CBLN3-202ENST00000555436 NUTM2DQ5VT03 806 aaPredicted RBP29.28■■■□□ 2.28
CBLN3-202ENST00000555436 TRIM52Q96A61 297 aa29.28■■■□□ 2.28
CBLN3-202ENST00000555436 SPHKAPQ2M3C7 1700 aa29.28■■■□□ 2.28
CBLN3-202ENST00000555436 TBX22Q9Y458 520 aa29.27■■■□□ 2.28
CBLN3-202ENST00000555436 DISP3Q9P2K9 1392 aa29.26■■■□□ 2.28
CBLN3-202ENST00000555436 NWD1Q149M9 1564 aa29.26■■■□□ 2.28
CBLN3-202ENST00000555436 NKTRP30414 1462 aaKnown RBP29.26■■■□□ 2.27
CBLN3-202ENST00000555436 PROSER2Q86WR7 435 aaPredicted RBP29.26■■■□□ 2.27
CBLN3-202ENST00000555436 ADAMTS13Q76LX8 1427 aa29.23■■■□□ 2.27
CBLN3-202ENST00000555436 TRPM2O94759 1503 aa29.23■■■□□ 2.27
CBLN3-202ENST00000555436 XIRP1Q702N8 1843 aaKnown RBP29.22■■■□□ 2.27
CBLN3-202ENST00000555436 SLC4A1APQ9BWU0 796 aaKnown RBP29.21■■■□□ 2.27
CBLN3-202ENST00000555436 ZNF326Q5BKZ1 582 aaKnown RBP29.19■■■□□ 2.26
CBLN3-202ENST00000555436 RBM33Q96EV2 1170 aaKnown RBP29.19■■■□□ 2.26
CBLN3-202ENST00000555436 DIP2AQ14689 1571 aa29.18■■■□□ 2.26
CBLN3-202ENST00000555436 CLTCL1P53675 1640 aa29.18■■■□□ 2.26
CBLN3-202ENST00000555436 PIK3R4Q99570 1358 aa29.17■■■□□ 2.26
CBLN3-202ENST00000555436 CHD2O14647 1828 aaKnown RBP29.14■■■□□ 2.26
CBLN3-202ENST00000555436 MSH6P52701 1360 aa29.11■■■□□ 2.25
CBLN3-202ENST00000555436 FAM135BQ49AJ0 1406 aa29.11■■■□□ 2.25
CBLN3-202ENST00000555436 SETBP1Q9Y6X0 1596 aa29.09■■■□□ 2.25
CBLN3-202ENST00000555436 NCOA3Q9Y6Q9 1424 aa29.09■■■□□ 2.25
CBLN3-202ENST00000555436 NEXMIFQ5QGS0 1516 aa29.08■■■□□ 2.25
CBLN3-202ENST00000555436 AMOTL2Q9Y2J4 779 aa29.06■■■□□ 2.24
CBLN3-202ENST00000555436 NRXN3Q9Y4C0 1643 aa29.05■■■□□ 2.24
CBLN3-202ENST00000555436 PTPRUQ92729 1446 aa29.05■■■□□ 2.24
CBLN3-202ENST00000555436 FOXD1Q16676 465 aa29.04■■■□□ 2.24
CBLN3-202ENST00000555436 ILDR2Q71H61 639 aa29.04■■■□□ 2.24
CBLN3-202ENST00000555436 MPHOSPH9Q99550 1183 aa29.04■■■□□ 2.24
CBLN3-202ENST00000555436 ACIN1Q9UKV3 1341 aaKnown RBP29.03■■■□□ 2.24
CBLN3-202ENST00000555436 KIF1BO60333 1816 aa29.03■■■□□ 2.24
CBLN3-202ENST00000555436 SLAIN2Q9P270 581 aa29.01■■■□□ 2.23
CBLN3-202ENST00000555436 SETD5Q9C0A6 1442 aa29.01■■■□□ 2.23
CBLN3-202ENST00000555436 METP08581 1390 aa29.01■■■□□ 2.23
CBLN3-202ENST00000555436 RPGRIP1LQ68CZ1 1315 aa29■■■□□ 2.23
CBLN3-202ENST00000555436 VGFO15240 615 aaPredicted RBP29■■■□□ 2.23
CBLN3-202ENST00000555436 C14orf37Q86TY3 774 aa29■■■□□ 2.23
CBLN3-202ENST00000555436 MED1Q15648 1581 aaPredicted RBP28.99■■■□□ 2.23
CBLN3-202ENST00000555436 C19orf44Q9H6X5 657 aa28.98■■■□□ 2.23
CBLN3-202ENST00000555436 CCDC144AA2RUR9 1427 aa28.96■■■□□ 2.23
CBLN3-202ENST00000555436 ROBO1Q9Y6N7 1651 aa28.95■■■□□ 2.22
CBLN3-202ENST00000555436 XRN1Q8IZH2 1706 aaKnown RBP28.94■■■□□ 2.22
CBLN3-202ENST00000555436 CADPS2Q86UW7 1296 aa28.94■■■□□ 2.22
CBLN3-202ENST00000555436 ATF3P18847 181 aa28.91■■■□□ 2.22
CBLN3-202ENST00000555436 RAB3GAP2Q9H2M9 1393 aa28.89■■■□□ 2.22
CBLN3-202ENST00000555436 SPATA31E1Q6ZUB1 1445 aa28.88■■■□□ 2.21
CBLN3-202ENST00000555436 SIPA1L2Q9P2F8 1722 aaPredicted RBP28.88■■■□□ 2.21
CBLN3-202ENST00000555436 DCCP43146 1447 aa28.86■■■□□ 2.21
CBLN3-202ENST00000555436 PPLO60437 1756 aa28.84■■■□□ 2.21
CBLN3-202ENST00000555436 RGL3Q3MIN7 710 aa28.84■■■□□ 2.21
CBLN3-202ENST00000555436 PHF23Q9BUL5 403 aaPredicted RBP28.83■■■□□ 2.21
CBLN3-202ENST00000555436 ANKRD30BQ9BXX2 1392 aa28.81■■■□□ 2.2
CBLN3-202ENST00000555436 SOCS7O14512 581 aa28.81■■■□□ 2.2
CBLN3-202ENST00000555436 SETD1AO15047 1707 aaKnown RBP28.8■■■□□ 2.2
CBLN3-202ENST00000555436 PTCH1Q13635 1447 aa28.8■■■□□ 2.2
CBLN3-202ENST00000555436 ADGRL3Q9HAR2 1447 aa28.8■■■□□ 2.2
CBLN3-202ENST00000555436 ADGRF5Q8IZF2 1346 aa28.8■■■□□ 2.2
CBLN3-202ENST00000555436 PRAG1Q86YV5 1406 aa28.79■■■□□ 2.2
CBLN3-202ENST00000555436 ROBO2Q9HCK4 1378 aa28.76■■■□□ 2.2
CBLN3-202ENST00000555436 BRINP3Q76B58 766 aa28.76■■■□□ 2.19
CBLN3-202ENST00000555436 PHLPP1O60346 1717 aa28.76■■■□□ 2.19
CBLN3-202ENST00000555436 MST1RQ04912 1400 aa28.75■■■□□ 2.19
CBLN3-202ENST00000555436 HRCP23327 699 aa28.74■■■□□ 2.19
CBLN3-202ENST00000555436 JCADQ9P266 1359 aa28.74■■■□□ 2.19
CBLN3-202ENST00000555436 AHDC1Q5TGY3 1603 aaPredicted RBP28.72■■■□□ 2.19
CBLN3-202ENST00000555436 COL16A1Q07092 1604 aaPredicted RBP28.72■■■□□ 2.19
CBLN3-202ENST00000555436 PIK3C2GO75747 1445 aa28.69■■■□□ 2.18
CBLN3-202ENST00000555436 IFT172Q9UG01 1749 aa28.69■■■□□ 2.18
CBLN3-202ENST00000555436 NALCNQ8IZF0 1738 aa28.69■■■□□ 2.18
CBLN3-202ENST00000555436 ASXL1Q8IXJ9 1541 aa28.68■■■□□ 2.18
CBLN3-202ENST00000555436 RGS17Q9UGC6 210 aaPredicted RBP28.66■■■□□ 2.18
CBLN3-202ENST00000555436 LRPPRCP42704 1394 aaKnown RBP28.64■■■□□ 2.18
CBLN3-202ENST00000555436 TECPR2O15040 1411 aa28.63■■■□□ 2.17
CBLN3-202ENST00000555436 MYOM2P54296 1465 aa28.62■■■□□ 2.17
CBLN3-202ENST00000555436 C1orf167Q5SNV9 1468 aa28.62■■■□□ 2.17
CBLN3-202ENST00000555436 NRXN1Q9ULB1 1477 aa28.62■■■□□ 2.17
CBLN3-202ENST00000555436 TMEM132EQ6IEE7 984 aa28.62■■■□□ 2.17
CBLN3-202ENST00000555436 STK26Q9P289 416 aa28.62■■■□□ 2.17
CBLN3-202ENST00000555436 ABCC11Q96J66 1382 aa28.62■■■□□ 2.17
CBLN3-202ENST00000555436 SPATA31A6Q5VVP1 1343 aa28.61■■■□□ 2.17
CBLN3-202ENST00000555436 C14orf93Q9H972 538 aaKnown RBP28.6■■■□□ 2.17
CBLN3-202ENST00000555436 YTHDC2Q9H6S0 1430 aaKnown RBP28.56■■■□□ 2.16
CBLN3-202ENST00000555436 NHSL1Q5SYE7 1610 aa28.55■■■□□ 2.16
CBLN3-202ENST00000555436 WAPLQ7Z5K2 1190 aa28.55■■■□□ 2.16
CBLN3-202ENST00000555436 CFAP70Q5T0N1 1121 aa28.54■■■□□ 2.16
CBLN3-202ENST00000555436 DDX17Q92841 729 aaKnown RBP28.54■■■□□ 2.16
CBLN3-202ENST00000555436 LRRC59Q96AG4 307 aaKnown RBP28.54■■■□□ 2.16
CBLN3-202ENST00000555436 SHPRHQ149N8 1683 aa28.54■■■□□ 2.16
CBLN3-202ENST00000555436 ORAI2Q96SN7 254 aa28.53■■■□□ 2.16
Retrieved 100 of 20,778 RNA–protein pairs in 14.7 ms