RNA–Protein interactions for RNA: ENST00000555425.5

SEC23A-210, Transcript of Sec23 homolog A, coat complex II component, humanhuman

TSL 5

Gene SEC23A, Length 547 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC23A-210ENST00000555425 SAMD7Q7Z3H4 446 aa8.39□□□□□ -1.07
SEC23A-210ENST00000555425 ZNF516Q92618 1163 aa8.39□□□□□ -1.07
SEC23A-210ENST00000555425 TMUB1Q9BVT8 246 aa8.39□□□□□ -1.07
SEC23A-210ENST00000555425 FGD5Q6ZNL6 1462 aa8.38□□□□□ -1.07
SEC23A-210ENST00000555425 DNAJC5Q9H3Z4 198 aa8.38□□□□□ -1.07
SEC23A-210ENST00000555425 WRNQ14191 1432 aaPredicted RBP eCLIP8.37□□□□□ -1.07
SEC23A-210ENST00000555425 LCE2AQ5TA79 106 aaPredicted RBP8.36□□□□□ -1.07
SEC23A-210ENST00000555425 TSKSQ9UJT2 592 aa8.36□□□□□ -1.07
SEC23A-210ENST00000555425 SOGA1O94964 1423 aa8.36□□□□□ -1.07
SEC23A-210ENST00000555425 POTECB2RU33 542 aa8.35□□□□□ -1.07
SEC23A-210ENST00000555425 TRIM67Q6ZTA4 783 aa8.35□□□□□ -1.07
SEC23A-210ENST00000555425 RBM33Q96EV2 1170 aaKnown RBP8.35□□□□□ -1.07
SEC23A-210ENST00000555425 STK17AQ9UEE5 414 aa8.35□□□□□ -1.07
SEC23A-210ENST00000555425 SYNJ1O43426 1573 aa8.35□□□□□ -1.07
SEC23A-210ENST00000555425 ABCA10Q8WWZ4 1543 aa8.34□□□□□ -1.07
SEC23A-210ENST00000555425 PBRM1Q86U86 1689 aa8.34□□□□□ -1.07
SEC23A-210ENST00000555425 ABCA5Q8WWZ7 1642 aa8.34□□□□□ -1.07
SEC23A-210ENST00000555425 NKX1-1Q15270 411 aaPredicted RBP8.34□□□□□ -1.07
SEC23A-210ENST00000555425 NECTIN2Q92692 538 aa8.34□□□□□ -1.07
SEC23A-210ENST00000555425 PRR20EP86478 221 aa8.33□□□□□ -1.08
SEC23A-210ENST00000555425 PRR20CP86479 221 aa8.33□□□□□ -1.08
SEC23A-210ENST00000555425 PRR20DP86480 221 aa8.33□□□□□ -1.08
SEC23A-210ENST00000555425 PRR20BP86481 221 aa8.33□□□□□ -1.08
SEC23A-210ENST00000555425 PRR20AP86496 221 aa8.33□□□□□ -1.08
SEC23A-210ENST00000555425 NKX2-3Q8TAU0 364 aa8.33□□□□□ -1.08
SEC23A-210ENST00000555425 ZNF608Q9ULD9 1512 aaPredicted RBP8.33□□□□□ -1.08
SEC23A-210ENST00000555425 MAGI1Q96QZ7 1491 aaPredicted RBP8.32□□□□□ -1.08
SEC23A-210ENST00000555425 SLC19A1P41440 591 aa8.31□□□□□ -1.08
SEC23A-210ENST00000555425 APLP1P51693 650 aa8.31□□□□□ -1.08
SEC23A-210ENST00000555425 HDGFP51858 240 aaKnown RBP8.31□□□□□ -1.08
SEC23A-210ENST00000555425 CHD1O14646 1710 aa8.3□□□□□ -1.08
SEC23A-210ENST00000555425 RNF40O75150 1001 aa8.3□□□□□ -1.08
SEC23A-210ENST00000555425 GRIN2BQ13224 1484 aa8.3□□□□□ -1.08
SEC23A-210ENST00000555425 RAD54L2Q9Y4B4 1467 aa8.3□□□□□ -1.08
SEC23A-210ENST00000555425 FAM187AA6NFU0 413 aa8.29□□□□□ -1.08
SEC23A-210ENST00000555425 NBPF26B4DH59 902 aa8.29□□□□□ -1.08
SEC23A-210ENST00000555425 SMAPO00193 183 aa8.29□□□□□ -1.08
SEC23A-210ENST00000555425 ERICH3Q5RHP9 1530 aa8.29□□□□□ -1.08
SEC23A-210ENST00000555425 GAPVD1Q14C86 1478 aa8.28□□□□□ -1.08
SEC23A-210ENST00000555425 EN1Q05925 392 aaPredicted RBP8.28□□□□□ -1.08
SEC23A-210ENST00000555425 ZNF598Q86UK7 904 aaKnown RBP8.28□□□□□ -1.08
SEC23A-210ENST00000555425 AQRO60306 1485 aaKnown RBP eCLIP8.27□□□□□ -1.092e-7■■■■□ 21.3
SEC23A-210ENST00000555425 MAP3K7O43318 606 aa8.27□□□□□ -1.09
SEC23A-210ENST00000555425 WFS1O76024 890 aa8.27□□□□□ -1.09
SEC23A-210ENST00000555425 COPS2P61201 443 aa8.27□□□□□ -1.09
SEC23A-210ENST00000555425 INSM1Q01101 510 aaPredicted RBP8.27□□□□□ -1.09
SEC23A-210ENST00000555425 SPRYD7Q5W111 196 aa8.27□□□□□ -1.09
SEC23A-210ENST00000555425 CDCA7LQ96GN5 454 aa8.27□□□□□ -1.09
SEC23A-210ENST00000555425 DDX12PQ92771 950 aa8.26□□□□□ -1.09
SEC23A-210ENST00000555425 SYNJ2O15056 1496 aa8.26□□□□□ -1.09
SEC23A-210ENST00000555425 TDRD9Q8NDG6 1382 aaKnown RBP8.25□□□□□ -1.09
SEC23A-210ENST00000555425 ZPR1O75312 459 aa8.25□□□□□ -1.09
SEC23A-210ENST00000555425 PRSS12P56730 875 aa8.25□□□□□ -1.09
SEC23A-210ENST00000555425 TSR1Q2NL82 804 aaKnown RBP8.25□□□□□ -1.09
SEC23A-210ENST00000555425 CERKQ8TCT0 537 aa8.25□□□□□ -1.09
SEC23A-210ENST00000555425 TATDN2Q93075 761 aa8.25□□□□□ -1.09
SEC23A-210ENST00000555425 PNMA3Q9UL41 463 aa8.25□□□□□ -1.09
SEC23A-210ENST00000555425 CUL7Q14999 1698 aa8.24□□□□□ -1.09
SEC23A-210ENST00000555425 RNF223E7ERA6 249 aa8.24□□□□□ -1.09
SEC23A-210ENST00000555425 NBR1Q14596 966 aa8.24□□□□□ -1.09
SEC23A-210ENST00000555425 AAASQ9NRG9 546 aa8.24□□□□□ -1.09
SEC23A-210ENST00000555425 ADAMTS12P58397 1594 aa8.23□□□□□ -1.09
SEC23A-210ENST00000555425 DPYSL4O14531 572 aa8.23□□□□□ -1.09
SEC23A-210ENST00000555425 WIPF1O43516 503 aa8.23□□□□□ -1.09
SEC23A-210ENST00000555425 SNAPC4Q5SXM2 1469 aa8.23□□□□□ -1.09
SEC23A-210ENST00000555425 LOC100996750A0A140TA64 210 aa8.22□□□□□ -1.09
SEC23A-210ENST00000555425 ST8SIA5O15466 376 aa8.22□□□□□ -1.09
SEC23A-210ENST00000555425 GTPBP6O43824 516 aaPredicted RBP8.22□□□□□ -1.09
SEC23A-210ENST00000555425 ZNF697Q5TEC3 545 aa8.22□□□□□ -1.09
SEC23A-210ENST00000555425 KRTAP4-6Q9BYQ5 205 aa8.22□□□□□ -1.09
SEC23A-210ENST00000555425 KIF27Q86VH2 1401 aa8.21□□□□□ -1.09
SEC23A-210ENST00000555425 CAMK2BQ13554 666 aa8.21□□□□□ -1.1
SEC23A-210ENST00000555425 ANKLE1Q8NAG6 615 aa8.21□□□□□ -1.1
SEC23A-210ENST00000555425 EMID1Q96A84 441 aaPredicted RBP8.21□□□□□ -1.1
SEC23A-210ENST00000555425 PRR14Q9BWN1 585 aa8.21□□□□□ -1.1
SEC23A-210ENST00000555425 FAM198AQ9UFP1 575 aa8.21□□□□□ -1.1
SEC23A-210ENST00000555425 CLASP1Q7Z460 1538 aa8.2□□□□□ -1.1
SEC23A-210ENST00000555425 TNFRSF10AO00220 468 aa8.2□□□□□ -1.1
SEC23A-210ENST00000555425 SLF2Q8IX21 1173 aa8.2□□□□□ -1.1
SEC23A-210ENST00000555425 FHAD1B1AJZ9 1412 aa8.2□□□□□ -1.1
SEC23A-210ENST00000555425 GDF9O60383 454 aa8.19□□□□□ -1.1
SEC23A-210ENST00000555425 SLC4A3P48751 1232 aa8.19□□□□□ -1.1
SEC23A-210ENST00000555425 GRIN2AQ12879 1464 aa8.19□□□□□ -1.1
SEC23A-210ENST00000555425 C3orf80F5H4A9 247 aa8.17□□□□□ -1.1
SEC23A-210ENST00000555425 NUDT18Q6ZVK8 323 aa8.17□□□□□ -1.1
SEC23A-210ENST00000555425 CRIPAKQ8N1N5 446 aa8.17□□□□□ -1.1
SEC23A-210ENST00000555425 CHMP7Q8WUX9 453 aaPredicted RBP8.17□□□□□ -1.1
SEC23A-210ENST00000555425 PCDHB3Q9Y5E6 796 aa8.17□□□□□ -1.1
SEC23A-210ENST00000555425 NFX1Q12986 1120 aaKnown RBP8.16□□□□□ -1.1
SEC23A-210ENST00000555425 SHROOM2Q13796 1616 aa8.16□□□□□ -1.1
SEC23A-210ENST00000555425 RIMBP3CA6NJZ7 1639 aa8.15□□□□□ -1.1
SEC23A-210ENST00000555425 RIMBP3BA6NNM3 1639 aa8.15□□□□□ -1.1
SEC23A-210ENST00000555425 RIMBP3Q9UFD9 1639 aa8.15□□□□□ -1.1
SEC23A-210ENST00000555425 NUP160Q12769 1436 aa8.15□□□□□ -1.1
SEC23A-210ENST00000555425 LIAT1Q6ZQX7 453 aa8.15□□□□□ -1.1
SEC23A-210ENST00000555425 BBXQ8WY36 941 aaPredicted RBP8.15□□□□□ -1.1
SEC23A-210ENST00000555425 RBM27Q9P2N5 1060 aaKnown RBP8.15□□□□□ -1.1
SEC23A-210ENST00000555425 ARHGEF11O15085 1522 aa8.14□□□□□ -1.11
SEC23A-210ENST00000555425 C11orf95C9JLR9 678 aaPredicted RBP8.14□□□□□ -1.11
SEC23A-210ENST00000555425 SWT1Q5T5J6 900 aaKnown RBP8.14□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 19.5 ms