RNA–Protein interactions for RNA: ENST00000555244.1

CPSF2-204, Transcript of cleavage and polyadenylation specific factor 2, humanhuman

TSL 3

Gene CPSF2, Length 806 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF2-204ENST00000555244 PRIM1P49642 420 aaKnown RBP7.36□□□□□ -1.23
CPSF2-204ENST00000555244 PLA2G2EQ9NZK7 142 aa7.36□□□□□ -1.23
CPSF2-204ENST00000555244 SEPT9Q9UHD8 586 aaPredicted RBP7.36□□□□□ -1.23
CPSF2-204ENST00000555244 MINK1Q8N4C8 1332 aaPredicted RBP7.35□□□□□ -1.23
CPSF2-204ENST00000555244 SUPT5HO00267 1087 aaKnown RBP7.35□□□□□ -1.23
CPSF2-204ENST00000555244 GPR37O15354 613 aa7.35□□□□□ -1.23
CPSF2-204ENST00000555244 NEUROD2Q15784 382 aa7.35□□□□□ -1.23
CPSF2-204ENST00000555244 THSD4Q6ZMP0 1018 aa7.35□□□□□ -1.23
CPSF2-204ENST00000555244 POLA1P09884 1462 aaPredicted RBP7.35□□□□□ -1.23
CPSF2-204ENST00000555244 TARBP1Q13395 1621 aaKnown RBP7.34□□□□□ -1.23
CPSF2-204ENST00000555244 ZNF608Q9ULD9 1512 aaPredicted RBP7.34□□□□□ -1.23
CPSF2-204ENST00000555244 TRIM6-TRIM34B2RNG4 842 aa7.34□□□□□ -1.23
CPSF2-204ENST00000555244 MAP2K5Q13163 448 aa7.34□□□□□ -1.23
CPSF2-204ENST00000555244 PTGDRQ13258 359 aa7.34□□□□□ -1.23
CPSF2-204ENST00000555244 BRPF1P55201 1214 aaPredicted RBP7.33□□□□□ -1.24
CPSF2-204ENST00000555244 CDHR5Q9HBB8 845 aa7.33□□□□□ -1.24
CPSF2-204ENST00000555244 CUX1P39880 1505 aa7.32□□□□□ -1.24
CPSF2-204ENST00000555244 WDR97A6NE52 1622 aa7.32□□□□□ -1.24
CPSF2-204ENST00000555244 BCAMP50895 628 aa7.32□□□□□ -1.24
CPSF2-204ENST00000555244 ANKK1Q8NFD2 765 aa7.32□□□□□ -1.24
CPSF2-204ENST00000555244 CERKQ8TCT0 537 aa7.32□□□□□ -1.24
CPSF2-204ENST00000555244 TSKSQ9UJT2 592 aa7.32□□□□□ -1.24
CPSF2-204ENST00000555244 SOGA1O94964 1423 aa7.32□□□□□ -1.24
CPSF2-204ENST00000555244 IRF6O14896 467 aa7.31□□□□□ -1.24
CPSF2-204ENST00000555244 TMEM132AQ24JP5 1023 aa7.31□□□□□ -1.24
CPSF2-204ENST00000555244 ZFRQ96KR1 1074 aaKnown RBP7.31□□□□□ -1.24
CPSF2-204ENST00000555244 DAXXQ9UER7 740 aaPredicted RBP7.31□□□□□ -1.24
CPSF2-204ENST00000555244 SMAPO00193 183 aa7.3□□□□□ -1.24
CPSF2-204ENST00000555244 TRIM66O15016 1216 aa7.3□□□□□ -1.24
CPSF2-204ENST00000555244 ONECUT3O60422 494 aaPredicted RBP7.3□□□□□ -1.24
CPSF2-204ENST00000555244 PACS2Q86VP3 889 aa7.3□□□□□ -1.24
CPSF2-204ENST00000555244 CDCA7LQ96GN5 454 aa7.3□□□□□ -1.24
CPSF2-204ENST00000555244 FGD5Q6ZNL6 1462 aa7.3□□□□□ -1.24
CPSF2-204ENST00000555244 LAPTM4BQ86VI4 370 aa7.29□□□□□ -1.24
CPSF2-204ENST00000555244 CCDC102AQ96A19 550 aa7.29□□□□□ -1.24
CPSF2-204ENST00000555244 NPDC1Q9NQX5 325 aaPredicted RBP7.29□□□□□ -1.24
CPSF2-204ENST00000555244 AQRO60306 1485 aaKnown RBP eCLIP7.29□□□□□ -1.24
CPSF2-204ENST00000555244 RAD54L2Q9Y4B4 1467 aa7.29□□□□□ -1.24
CPSF2-204ENST00000555244 EIF4G3O43432 1585 aaKnown RBP7.29□□□□□ -1.24
CPSF2-204ENST00000555244 PRSS12P56730 875 aa7.28□□□□□ -1.24
CPSF2-204ENST00000555244 PDE4DQ08499 809 aa7.28□□□□□ -1.24
CPSF2-204ENST00000555244 ABCA10Q8WWZ4 1543 aa7.27□□□□□ -1.25
CPSF2-204ENST00000555244 SOWAHBA6NEL2 793 aa7.27□□□□□ -1.25
CPSF2-204ENST00000555244 FECHP22830 423 aa7.27□□□□□ -1.25
CPSF2-204ENST00000555244 FAM98CQ17RN3 349 aaKnown RBP7.27□□□□□ -1.25
CPSF2-204ENST00000555244 FAM198AQ9UFP1 575 aa7.27□□□□□ -1.25
CPSF2-204ENST00000555244 TDRD9Q8NDG6 1382 aaKnown RBP7.26□□□□□ -1.25
CPSF2-204ENST00000555244 C3orf80F5H4A9 247 aa7.26□□□□□ -1.25
CPSF2-204ENST00000555244 PNMA3Q9UL41 463 aa7.26□□□□□ -1.25
CPSF2-204ENST00000555244 LRCH3Q96II8 777 aa7.25□□□□□ -1.25
CPSF2-204ENST00000555244 WBP1LQ9NX94 342 aa7.25□□□□□ -1.25
CPSF2-204ENST00000555244 CDKN2AIPQ9NXV6 580 aaPredicted RBP7.25□□□□□ -1.25
CPSF2-204ENST00000555244 RBM27Q9P2N5 1060 aaKnown RBP7.25□□□□□ -1.25
CPSF2-204ENST00000555244 WRNQ14191 1432 aaPredicted RBP eCLIP7.25□□□□□ -1.25
CPSF2-204ENST00000555244 GRIN2BQ13224 1484 aa7.24□□□□□ -1.25
CPSF2-204ENST00000555244 MAGI1Q96QZ7 1491 aaPredicted RBP7.24□□□□□ -1.25
CPSF2-204ENST00000555244 TOP2BQ02880 1626 aa7.24□□□□□ -1.25
CPSF2-204ENST00000555244 BIVM-ERCC5R4GMW8 1640 aa7.24□□□□□ -1.25
CPSF2-204ENST00000555244 AMHR2Q16671 573 aa7.24□□□□□ -1.25
CPSF2-204ENST00000555244 PADI6Q6TGC4 694 aa7.24□□□□□ -1.25
CPSF2-204ENST00000555244 NUDT18Q6ZVK8 323 aa7.24□□□□□ -1.25
CPSF2-204ENST00000555244 TATDN2Q93075 761 aa7.24□□□□□ -1.25
CPSF2-204ENST00000555244 KDM4CQ9H3R0 1056 aa7.24□□□□□ -1.25
CPSF2-204ENST00000555244 HPS5Q9UPZ3 1129 aa7.24□□□□□ -1.25
CPSF2-204ENST00000555244 NBPF26B4DH59 902 aa7.23□□□□□ -1.25
CPSF2-204ENST00000555244 OATP04181 439 aa7.23□□□□□ -1.25
CPSF2-204ENST00000555244 GPBP1L1Q9HC44 474 aaPredicted RBP7.23□□□□□ -1.25
CPSF2-204ENST00000555244 GAPVD1Q14C86 1478 aa7.23□□□□□ -1.25
CPSF2-204ENST00000555244 RNF40O75150 1001 aa7.22□□□□□ -1.25
CPSF2-204ENST00000555244 TTLL12Q14166 644 aaPredicted RBP7.22□□□□□ -1.25
CPSF2-204ENST00000555244 SAMD7Q7Z3H4 446 aa7.22□□□□□ -1.25
CPSF2-204ENST00000555244 ABCA5Q8WWZ7 1642 aa7.22□□□□□ -1.25
CPSF2-204ENST00000555244 TSR3Q9UJK0 312 aaKnown RBP7.21□□□□□ -1.26
CPSF2-204ENST00000555244 SYNJ2O15056 1496 aa7.21□□□□□ -1.26
CPSF2-204ENST00000555244 SNAPC4Q5SXM2 1469 aa7.21□□□□□ -1.26
CPSF2-204ENST00000555244 SYNJ1O43426 1573 aa7.2□□□□□ -1.26
CPSF2-204ENST00000555244 PPP4CP60510 307 aa7.2□□□□□ -1.26
CPSF2-204ENST00000555244 CLCN1P35523 988 aa7.19□□□□□ -1.26
CPSF2-204ENST00000555244 TTC13Q8NBP0 860 aa7.19□□□□□ -1.26
CPSF2-204ENST00000555244 RBM46Q8TBY0 533 aaKnown RBP7.19□□□□□ -1.26
CPSF2-204ENST00000555244 CHD1O14646 1710 aa7.18□□□□□ -1.26
CPSF2-204ENST00000555244 ARHGEF11O15085 1522 aa7.18□□□□□ -1.26
CPSF2-204ENST00000555244 CLASP1Q7Z460 1538 aa7.18□□□□□ -1.26
CPSF2-204ENST00000555244 HDGFP51858 240 aaKnown RBP7.18□□□□□ -1.26
CPSF2-204ENST00000555244 PARP9Q8IXQ6 854 aa7.18□□□□□ -1.26
CPSF2-204ENST00000555244 CHMP7Q8WUX9 453 aaPredicted RBP7.18□□□□□ -1.26
CPSF2-204ENST00000555244 DDRGK1Q96HY6 314 aa7.18□□□□□ -1.26
CPSF2-204ENST00000555244 ADGRG1Q9Y653 693 aa7.18□□□□□ -1.26
CPSF2-204ENST00000555244 ERICH3Q5RHP9 1530 aa7.17□□□□□ -1.26
CPSF2-204ENST00000555244 RIMBP3CA6NJZ7 1639 aa7.17□□□□□ -1.26
CPSF2-204ENST00000555244 RIMBP3BA6NNM3 1639 aa7.17□□□□□ -1.26
CPSF2-204ENST00000555244 RIMBP3Q9UFD9 1639 aa7.17□□□□□ -1.26
CPSF2-204ENST00000555244 METTL3Q86U44 580 aaKnown RBP7.17□□□□□ -1.26
CPSF2-204ENST00000555244 IL27Q8NEV9 243 aa7.17□□□□□ -1.26
CPSF2-204ENST00000555244 GPCPD1Q9NPB8 672 aa7.17□□□□□ -1.26
CPSF2-204ENST00000555244 GTF3C3Q9Y5Q9 886 aa7.17□□□□□ -1.26
CPSF2-204ENST00000555244 FAM161AQ3B820 660 aa7.16□□□□□ -1.26
CPSF2-204ENST00000555244 GIGYF2Q6Y7W6 1299 aaKnown RBP7.16□□□□□ -1.26
CPSF2-204ENST00000555244 NYAP1Q6ZVC0 841 aa7.16□□□□□ -1.26
CPSF2-204ENST00000555244 PXYLP1Q8TE99 480 aa7.16□□□□□ -1.26
Retrieved 100 of 20,778 RNA–protein pairs in 18.3 ms