RNA–Protein interactions for RNA: ENST00000554350.5

ATXN3-226, Transcript of ataxin 3, humanhuman

TSL 1 (best)

Gene ATXN3, Length 943 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-226ENST00000554350 A0A0G2JS52 829 aa10.92□□□□□ -0.66
ATXN3-226ENST00000554350 SNAPC4Q5SXM2 1469 aa10.92□□□□□ -0.66
ATXN3-226ENST00000554350 PRDM2Q13029 1718 aa10.92□□□□□ -0.66
ATXN3-226ENST00000554350 PACS2Q86VP3 889 aa10.91□□□□□ -0.66
ATXN3-226ENST00000554350 SMAPO00193 183 aa10.9□□□□□ -0.66
ATXN3-226ENST00000554350 TARBP1Q13395 1621 aaKnown RBP10.9□□□□□ -0.66
ATXN3-226ENST00000554350 CERKQ8TCT0 537 aa10.89□□□□□ -0.67
ATXN3-226ENST00000554350 KCNV2Q8TDN2 545 aa10.89□□□□□ -0.67
ATXN3-226ENST00000554350 NPDC1Q9NQX5 325 aaPredicted RBP10.89□□□□□ -0.67
ATXN3-226ENST00000554350 CDKN2AIPQ9NXV6 580 aaPredicted RBP10.89□□□□□ -0.67
ATXN3-226ENST00000554350 ABCC8Q09428 1581 aa10.89□□□□□ -0.67
ATXN3-226ENST00000554350 TDRD9Q8NDG6 1382 aaKnown RBP10.89□□□□□ -0.67
ATXN3-226ENST00000554350 FBXO41Q8TF61 875 aa10.88□□□□□ -0.67
ATXN3-226ENST00000554350 ERCC6L2Q5T890 1561 aa10.87□□□□□ -0.67
ATXN3-226ENST00000554350 DNMBPQ6XZF7 1577 aa10.87□□□□□ -0.67
ATXN3-226ENST00000554350 KIF13AQ9H1H9 1805 aa10.87□□□□□ -0.67
ATXN3-226ENST00000554350 NYAP1Q6ZVC0 841 aa10.87□□□□□ -0.67
ATXN3-226ENST00000554350 TTC13Q8NBP0 860 aa10.87□□□□□ -0.67
ATXN3-226ENST00000554350 LRCH3Q96II8 777 aa10.87□□□□□ -0.67
ATXN3-226ENST00000554350 HPS5Q9UPZ3 1129 aa10.87□□□□□ -0.67
ATXN3-226ENST00000554350 TATDN2Q93075 761 aa10.86□□□□□ -0.67
ATXN3-226ENST00000554350 TSR3Q9UJK0 312 aaKnown RBP10.86□□□□□ -0.67
ATXN3-226ENST00000554350 LMTK3Q96Q04 1460 aa10.86□□□□□ -0.67
ATXN3-226ENST00000554350 MLLT3P42568 568 aaPredicted RBP10.85□□□□□ -0.67
ATXN3-226ENST00000554350 ARHGEF1Q92888 912 aaKnown RBP10.85□□□□□ -0.67
ATXN3-226ENST00000554350 RBM27Q9P2N5 1060 aaKnown RBP10.85□□□□□ -0.67
ATXN3-226ENST00000554350 HECW2Q9P2P5 1572 aa10.85□□□□□ -0.67
ATXN3-226ENST00000554350 FAM69CQ0P6D2 419 aa10.84□□□□□ -0.67
ATXN3-226ENST00000554350 SAMD7Q7Z3H4 446 aa10.84□□□□□ -0.67
ATXN3-226ENST00000554350 RAD54L2Q9Y4B4 1467 aa10.83□□□□□ -0.68
ATXN3-226ENST00000554350 RGS20O76081 388 aa10.83□□□□□ -0.68
ATXN3-226ENST00000554350 PNMA3Q9UL41 463 aa10.83□□□□□ -0.68
ATXN3-226ENST00000554350 POLA1P09884 1462 aaPredicted RBP10.82□□□□□ -0.68
ATXN3-226ENST00000554350 NBPF26B4DH59 902 aa10.82□□□□□ -0.68
ATXN3-226ENST00000554350 KDM6BO15054 1643 aa10.82□□□□□ -0.68
ATXN3-226ENST00000554350 MAGI1Q96QZ7 1491 aaPredicted RBP10.81□□□□□ -0.68
ATXN3-226ENST00000554350 TOP2AP11388 1531 aaKnown RBP10.81□□□□□ -0.68
ATXN3-226ENST00000554350 NUDT18Q6ZVK8 323 aa10.81□□□□□ -0.68
ATXN3-226ENST00000554350 SYNJ2O15056 1496 aa10.81□□□□□ -0.68
ATXN3-226ENST00000554350 PADI6Q6TGC4 694 aa10.8□□□□□ -0.68
ATXN3-226ENST00000554350 SOGA1O94964 1423 aa10.8□□□□□ -0.68
ATXN3-226ENST00000554350 ADGRL1O94910 1474 aa10.77□□□□□ -0.69
ATXN3-226ENST00000554350 PPP4CP60510 307 aa10.77□□□□□ -0.69
ATXN3-226ENST00000554350 KCNC4Q03721 635 aa10.77□□□□□ -0.69
ATXN3-226ENST00000554350 GRIN2BQ13224 1484 aa10.76□□□□□ -0.69
ATXN3-226ENST00000554350 SOCS7O14512 581 aa10.75□□□□□ -0.69
ATXN3-226ENST00000554350 TJAP1Q5JTD0 557 aa10.75□□□□□ -0.69
ATXN3-226ENST00000554350 EYA1Q99502 592 aa10.74□□□□□ -0.69
ATXN3-226ENST00000554350 PTGDRQ13258 359 aa10.73□□□□□ -0.69
ATXN3-226ENST00000554350 ABCC10Q5T3U5 1492 aa10.73□□□□□ -0.69
ATXN3-226ENST00000554350 TSPOAP1O95153 1857 aa10.72□□□□□ -0.69
ATXN3-226ENST00000554350 WDR97A6NE52 1622 aa10.71□□□□□ -0.69
ATXN3-226ENST00000554350 APLP1P51693 650 aa10.71□□□□□ -0.69
ATXN3-226ENST00000554350 SWT1Q5T5J6 900 aaKnown RBP10.71□□□□□ -0.69
ATXN3-226ENST00000554350 CEP170Q5SW79 1584 aa10.7□□□□□ -0.7
ATXN3-226ENST00000554350 CCDC88BA6NC98 1476 aa10.7□□□□□ -0.7
ATXN3-226ENST00000554350 ILDR2Q71H61 639 aa10.7□□□□□ -0.7
ATXN3-226ENST00000554350 SEMA3EO15041 775 aa10.69□□□□□ -0.7
ATXN3-226ENST00000554350 MTRQ99707 1265 aa10.69□□□□□ -0.7
ATXN3-226ENST00000554350 DISP3Q9P2K9 1392 aa10.68□□□□□ -0.7
ATXN3-226ENST00000554350 PLCB2Q00722 1185 aa10.68□□□□□ -0.7
ATXN3-226ENST00000554350 DIP2BQ9P265 1576 aa10.68□□□□□ -0.7
ATXN3-226ENST00000554350 FGD5Q6ZNL6 1462 aa10.68□□□□□ -0.7
ATXN3-226ENST00000554350 P3H3Q8IVL6 736 aa10.67□□□□□ -0.7
ATXN3-226ENST00000554350 PBRM1Q86U86 1689 aa10.66□□□□□ -0.7
ATXN3-226ENST00000554350 RNF40O75150 1001 aa10.66□□□□□ -0.7
ATXN3-226ENST00000554350 ZNF516Q92618 1163 aa10.66□□□□□ -0.7
ATXN3-226ENST00000554350 IRX2Q9BZI1 471 aaPredicted RBP10.66□□□□□ -0.7
ATXN3-226ENST00000554350 IL21Q9HBE4 155 aa10.65□□□□□ -0.7
ATXN3-226ENST00000554350 ADGRG1Q9Y653 693 aa10.65□□□□□ -0.7
ATXN3-226ENST00000554350 HDGFP51858 240 aaKnown RBP10.63□□□□□ -0.71
ATXN3-226ENST00000554350 FAM161AQ3B820 660 aa10.63□□□□□ -0.71
ATXN3-226ENST00000554350 SLF2Q8IX21 1173 aa10.63□□□□□ -0.71
ATXN3-226ENST00000554350 NUTM2FA1L443 756 aa10.62□□□□□ -0.71
ATXN3-226ENST00000554350 MAPKBP1O60336 1514 aa10.62□□□□□ -0.71
ATXN3-226ENST00000554350 GRIN2AQ12879 1464 aa10.61□□□□□ -0.71
ATXN3-226ENST00000554350 PRG4Q92954 1404 aaPredicted RBP10.6□□□□□ -0.71
ATXN3-226ENST00000554350 TESPA1A2RU30 521 aaPredicted RBP10.6□□□□□ -0.71
ATXN3-226ENST00000554350 NKX2-3Q8TAU0 364 aa10.6□□□□□ -0.71
ATXN3-226ENST00000554350 TMEM134Q9H6X4 195 aa10.6□□□□□ -0.71
ATXN3-226ENST00000554350 DNAJB2P25686 324 aa10.59□□□□□ -0.71
ATXN3-226ENST00000554350 SHROOM2Q13796 1616 aa10.58□□□□□ -0.72
ATXN3-226ENST00000554350 PPP1R18Q6NYC8 613 aa10.58□□□□□ -0.72
ATXN3-226ENST00000554350 NUP160Q12769 1436 aa10.58□□□□□ -0.72
ATXN3-226ENST00000554350 RCCD1A6NED2 376 aa10.57□□□□□ -0.72
ATXN3-226ENST00000554350 FCHSD2O94868 740 aa10.57□□□□□ -0.72
ATXN3-226ENST00000554350 RBM46Q8TBY0 533 aaKnown RBP10.57□□□□□ -0.72
ATXN3-226ENST00000554350 NECTIN2Q92692 538 aa10.57□□□□□ -0.72
ATXN3-226ENST00000554350 COPS2P61201 443 aa10.56□□□□□ -0.72
ATXN3-226ENST00000554350 RBM26Q5T8P6 1007 aaKnown RBP10.56□□□□□ -0.72
ATXN3-226ENST00000554350 GPR37O15354 613 aa10.55□□□□□ -0.72
ATXN3-226ENST00000554350 ADCY10Q96PN6 1610 aa10.54□□□□□ -0.72
ATXN3-226ENST00000554350 CUX1P39880 1505 aa10.53□□□□□ -0.72
ATXN3-226ENST00000554350 KDM2AQ9Y2K7 1162 aa10.53□□□□□ -0.72
ATXN3-226ENST00000554350 TOP2BQ02880 1626 aa10.52□□□□□ -0.73
ATXN3-226ENST00000554350 ZPR1O75312 459 aa10.52□□□□□ -0.73
ATXN3-226ENST00000554350 SLC10A3P09131 477 aa10.52□□□□□ -0.73
ATXN3-226ENST00000554350 FECHP22830 423 aa10.52□□□□□ -0.73
ATXN3-226ENST00000554350 PXYLP1Q8TE99 480 aa10.52□□□□□ -0.73
ATXN3-226ENST00000554350 EIF4ENIF1Q9NRA8 985 aaKnown RBP10.52□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 80 ms