RNA–Protein interactions for RNA: ENST00000554306.1

KTN1-213, Transcript of kinectin 1, humanhuman

TSL 3

Gene KTN1, Length 476 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KTN1-213ENST00000554306 SMYD5Q6GMV2 418 aa11.43□□□□□ -0.58
KTN1-213ENST00000554306 SAMD7Q7Z3H4 446 aa11.43□□□□□ -0.58
KTN1-213ENST00000554306 NUTM2FA1L443 756 aa11.42□□□□□ -0.58
KTN1-213ENST00000554306 PPP4CP60510 307 aa11.42□□□□□ -0.58
KTN1-213ENST00000554306 CFTRP13569 1480 aa11.42□□□□□ -0.58
KTN1-213ENST00000554306 NESP48681 1621 aa11.4□□□□□ -0.58
KTN1-213ENST00000554306 TESPA1A2RU30 521 aaPredicted RBP11.4□□□□□ -0.58
KTN1-213ENST00000554306 ITGBL1O95965 494 aaPredicted RBP11.4□□□□□ -0.58
KTN1-213ENST00000554306 VSIG10Q8N0Z9 540 aa11.4□□□□□ -0.58
KTN1-213ENST00000554306 KDM2AQ9Y2K7 1162 aa11.4□□□□□ -0.58
KTN1-213ENST00000554306 FCHSD2O94868 740 aa11.37□□□□□ -0.59
KTN1-213ENST00000554306 NECTIN2Q92692 538 aa11.37□□□□□ -0.59
KTN1-213ENST00000554306 PDS5BQ9NTI5 1447 aa11.36□□□□□ -0.59
KTN1-213ENST00000554306 SLC4A3P48751 1232 aa11.36□□□□□ -0.59
KTN1-213ENST00000554306 EYA1Q99502 592 aa11.36□□□□□ -0.59
KTN1-213ENST00000554306 A0A0G2JS52 829 aa11.34□□□□□ -0.59
KTN1-213ENST00000554306 RNF40O75150 1001 aa11.34□□□□□ -0.59
KTN1-213ENST00000554306 SLF2Q8IX21 1173 aa11.34□□□□□ -0.59
KTN1-213ENST00000554306 RBM46Q8TBY0 533 aaKnown RBP11.34□□□□□ -0.59
KTN1-213ENST00000554306 KCNC4Q03721 635 aa11.33□□□□□ -0.6
KTN1-213ENST00000554306 KIF21AQ7Z4S6 1674 aa11.33□□□□□ -0.6
KTN1-213ENST00000554306 FANCD2Q9BXW9 1451 aa11.32□□□□□ -0.6
KTN1-213ENST00000554306 RGS20O76081 388 aa11.32□□□□□ -0.6
KTN1-213ENST00000554306 SWT1Q5T5J6 900 aaKnown RBP11.32□□□□□ -0.6
KTN1-213ENST00000554306 HIC1Q14526 733 aa11.31□□□□□ -0.6
KTN1-213ENST00000554306 RBM26Q5T8P6 1007 aaKnown RBP11.31□□□□□ -0.6
KTN1-213ENST00000554306 ADGRG1Q9Y653 693 aa11.31□□□□□ -0.6
KTN1-213ENST00000554306 ERCC6Q03468 1493 aa11.31□□□□□ -0.6
KTN1-213ENST00000554306 DNAJB2P25686 324 aa11.3□□□□□ -0.6
KTN1-213ENST00000554306 CEP164Q9UPV0 1460 aa11.3□□□□□ -0.6
KTN1-213ENST00000554306 OATP04181 439 aa11.26□□□□□ -0.61
KTN1-213ENST00000554306 TMEM134Q9H6X4 195 aa11.26□□□□□ -0.61
KTN1-213ENST00000554306 GNPATO15228 680 aa11.25□□□□□ -0.61
KTN1-213ENST00000554306 PRR14Q9BWN1 585 aa11.25□□□□□ -0.61
KTN1-213ENST00000554306 ABCC8Q09428 1581 aa11.24□□□□□ -0.61
KTN1-213ENST00000554306 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP11.24□□□□□ -0.61
KTN1-213ENST00000554306 RCCD1A6NED2 376 aa11.24□□□□□ -0.61
KTN1-213ENST00000554306 TJAP1Q5JTD0 557 aa11.24□□□□□ -0.61
KTN1-213ENST00000554306 TULP1O00294 542 aaPredicted RBP11.23□□□□□ -0.61
KTN1-213ENST00000554306 APLP1P51693 650 aa11.23□□□□□ -0.61
KTN1-213ENST00000554306 FAM161AQ3B820 660 aa11.23□□□□□ -0.61
KTN1-213ENST00000554306 MTRQ99707 1265 aa11.23□□□□□ -0.61
KTN1-213ENST00000554306 IL21Q9HBE4 155 aa11.23□□□□□ -0.61
KTN1-213ENST00000554306 WRNQ14191 1432 aaPredicted RBP eCLIP11.22□□□□□ -0.61
KTN1-213ENST00000554306 MRC2Q9UBG0 1479 aa11.21□□□□□ -0.61
KTN1-213ENST00000554306 GPIHBP1Q8IV16 184 aa11.21□□□□□ -0.61
KTN1-213ENST00000554306 PXYLP1Q8TE99 480 aa11.21□□□□□ -0.61
KTN1-213ENST00000554306 GPR37O15354 613 aa11.2□□□□□ -0.62
KTN1-213ENST00000554306 DNMBPQ6XZF7 1577 aa11.2□□□□□ -0.62
KTN1-213ENST00000554306 BIVM-ERCC5R4GMW8 1640 aa11.18□□□□□ -0.62
KTN1-213ENST00000554306 METTL3Q86U44 580 aaKnown RBP11.18□□□□□ -0.62
KTN1-213ENST00000554306 CUX1P39880 1505 aa11.18□□□□□ -0.62
KTN1-213ENST00000554306 SYNJ1O43426 1573 aa11.17□□□□□ -0.62
KTN1-213ENST00000554306 THOC2Q8NI27 1593 aaKnown RBP11.17□□□□□ -0.62
KTN1-213ENST00000554306 URB2Q14146 1524 aaKnown RBP11.17□□□□□ -0.62
KTN1-213ENST00000554306 TOPBP1Q92547 1522 aa11.17□□□□□ -0.62
KTN1-213ENST00000554306 TOP2BQ02880 1626 aa11.17□□□□□ -0.62
KTN1-213ENST00000554306 FECHP22830 423 aa11.16□□□□□ -0.62
KTN1-213ENST00000554306 KMT5BQ4FZB7 885 aa11.16□□□□□ -0.62
KTN1-213ENST00000554306 WDR62O43379 1518 aa11.15□□□□□ -0.62
KTN1-213ENST00000554306 RSPH4AQ5TD94 716 aa11.14□□□□□ -0.63
KTN1-213ENST00000554306 PCDHB3Q9Y5E6 796 aa11.14□□□□□ -0.63
KTN1-213ENST00000554306 COPS2P61201 443 aa11.13□□□□□ -0.63
KTN1-213ENST00000554306 SLC24A1O60721 1099 aa11.12□□□□□ -0.63
KTN1-213ENST00000554306 CFHP08603 1231 aa11.12□□□□□ -0.63
KTN1-213ENST00000554306 ZNF516Q92618 1163 aa11.12□□□□□ -0.63
KTN1-213ENST00000554306 ACTN4O43707 911 aaKnown RBP11.11□□□□□ -0.63
KTN1-213ENST00000554306 FGD5Q6ZNL6 1462 aa11.11□□□□□ -0.63
KTN1-213ENST00000554306 ZPR1O75312 459 aa11.1□□□□□ -0.63
KTN1-213ENST00000554306 SLC10A3P09131 477 aa11.09□□□□□ -0.63
KTN1-213ENST00000554306 DAXXQ9UER7 740 aaPredicted RBP11.09□□□□□ -0.63
KTN1-213ENST00000554306 GGCXP38435 758 aa11.08□□□□□ -0.64
KTN1-213ENST00000554306 PPP1R18Q6NYC8 613 aa11.08□□□□□ -0.64
KTN1-213ENST00000554306 IRX2Q9BZI1 471 aaPredicted RBP11.08□□□□□ -0.64
KTN1-213ENST00000554306 POLA1P09884 1462 aaPredicted RBP11.07□□□□□ -0.64
KTN1-213ENST00000554306 BLOC1S3Q6QNY0 202 aa11.07□□□□□ -0.64
KTN1-213ENST00000554306 SOGA1O94964 1423 aa11.07□□□□□ -0.64
KTN1-213ENST00000554306 MAP2K5Q13163 448 aa11.06□□□□□ -0.64
KTN1-213ENST00000554306 EIF4ENIF1Q9NRA8 985 aaKnown RBP11.06□□□□□ -0.64
KTN1-213ENST00000554306 CUX2O14529 1486 aa11.06□□□□□ -0.64
KTN1-213ENST00000554306 SULF1Q8IWU6 871 aa11.05□□□□□ -0.64
KTN1-213ENST00000554306 NKX2-3Q8TAU0 364 aa11.05□□□□□ -0.64
KTN1-213ENST00000554306 IFT140Q96RY7 1462 aa11.04□□□□□ -0.64
KTN1-213ENST00000554306 RAD54L2Q9Y4B4 1467 aa11.04□□□□□ -0.64
KTN1-213ENST00000554306 RDH13Q8NBN7 331 aa11.03□□□□□ -0.64
KTN1-213ENST00000554306 TMUB1Q9BVT8 246 aa11.03□□□□□ -0.64
KTN1-213ENST00000554306 TARBP1Q13395 1621 aaKnown RBP11.02□□□□□ -0.64
KTN1-213ENST00000554306 DDX11L8A8MPP1 907 aa11.02□□□□□ -0.65
KTN1-213ENST00000554306 NR1I2O75469 434 aa11.02□□□□□ -0.65
KTN1-213ENST00000554306 WDR97A6NE52 1622 aa11.02□□□□□ -0.65
KTN1-213ENST00000554306 DHX30Q7L2E3 1194 aaKnown RBP eCLIP11.01□□□□□ -0.65
KTN1-213ENST00000554306 PHOX2BQ99453 314 aa11.01□□□□□ -0.65
KTN1-213ENST00000554306 MINK1Q8N4C8 1332 aaPredicted RBP11.01□□□□□ -0.65
KTN1-213ENST00000554306 ABCA10Q8WWZ4 1543 aa11□□□□□ -0.65
KTN1-213ENST00000554306 NLRP7Q8WX94 980 aa11□□□□□ -0.65
KTN1-213ENST00000554306 IRF6O14896 467 aa10.99□□□□□ -0.65
KTN1-213ENST00000554306 PRKD2Q9BZL6 878 aa10.99□□□□□ -0.65
KTN1-213ENST00000554306 V9GY48 417 aaPredicted RBP10.99□□□□□ -0.65
KTN1-213ENST00000554306 KIF27Q86VH2 1401 aa10.99□□□□□ -0.65
KTN1-213ENST00000554306 TLL1O43897 1013 aa10.97□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 23.7 ms