RNA–Protein interactions for RNA: ENST00000554306.1

KTN1-213, Transcript of kinectin 1, humanhuman

TSL 3

Gene KTN1, Length 476 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KTN1-213ENST00000554306 AEBP2Q6ZN18 517 aaPredicted RBP28.14■■■□□ 2.1
KTN1-213ENST00000554306 CHIC1Q5VXU3 224 aa27.1■■□□□ 1.93
KTN1-213ENST00000554306 SENP3Q9H4L4 574 aaPredicted RBP24.06■■□□□ 1.44
KTN1-213ENST00000554306 PHF23Q9BUL5 403 aaPredicted RBP23.74■■□□□ 1.39
KTN1-213ENST00000554306 FOXD1Q16676 465 aa22.31■■□□□ 1.16
KTN1-213ENST00000554306 PLPPR3Q6T4P5 718 aa21.84■■□□□ 1.09
KTN1-213ENST00000554306 PPP6R1Q9UPN7 881 aa21.07■□□□□ 0.96
KTN1-213ENST00000554306 ADRA2BP18089 450 aa21.04■□□□□ 0.96
KTN1-213ENST00000554306 PIAS4Q8N2W9 510 aaPredicted RBP20.97■□□□□ 0.95
KTN1-213ENST00000554306 MSH5O43196 834 aa20.85■□□□□ 0.93
KTN1-213ENST00000554306 POTEDQ86YR6 584 aa19.72■□□□□ 0.75
KTN1-213ENST00000554306 SCAF1Q9H7N4 1312 aaKnown RBP19.38■□□□□ 0.69
KTN1-213ENST00000554306 MAPK8IP2Q13387 824 aaPredicted RBP19.21■□□□□ 0.67
KTN1-213ENST00000554306 PPP4R3CPQ6ZMV5 832 aa19.15■□□□□ 0.66
KTN1-213ENST00000554306 DMRT2Q9Y5R5 561 aa19.1■□□□□ 0.65
KTN1-213ENST00000554306 CNKSR2Q8WXI2 1034 aa18.75■□□□□ 0.59
KTN1-213ENST00000554306 NCBP3Q53F19 620 aaKnown RBP18.58■□□□□ 0.56
KTN1-213ENST00000554306 HOXD11P31277 338 aaPredicted RBP18.53■□□□□ 0.56
KTN1-213ENST00000554306 RNF216Q9NWF9 866 aaPredicted RBP18.5■□□□□ 0.55
KTN1-213ENST00000554306 DCAF8L1A6NGE4 600 aa18.29■□□□□ 0.52
KTN1-213ENST00000554306 NPM3O75607 178 aaKnown RBP18.22■□□□□ 0.51
KTN1-213ENST00000554306 KCNA4P22459 653 aa18.13■□□□□ 0.49
KTN1-213ENST00000554306 DNAJC5BQ9UF47 199 aa17.9■□□□□ 0.46
KTN1-213ENST00000554306 RNF39Q9H2S5 420 aa17.77■□□□□ 0.44
KTN1-213ENST00000554306 CACNB1Q02641 598 aaPredicted RBP17.66■□□□□ 0.42
KTN1-213ENST00000554306 GRWD1Q9BQ67 446 aaKnown RBP eCLIP17.66■□□□□ 0.424e-7■□□□□ 10
KTN1-213ENST00000554306 C1QBPQ07021 282 aaKnown RBP17.57■□□□□ 0.4
KTN1-213ENST00000554306 SLC4A2P04920 1241 aa17.29■□□□□ 0.36
KTN1-213ENST00000554306 U3KPZ7 1027 aaPredicted RBP17.28■□□□□ 0.36
KTN1-213ENST00000554306 SLC4A1APQ9BWU0 796 aaKnown RBP17.23■□□□□ 0.35
KTN1-213ENST00000554306 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP17.02■□□□□ 0.32
KTN1-213ENST00000554306 HNRNPUL2Q1KMD3 747 aaKnown RBP17.02■□□□□ 0.32
KTN1-213ENST00000554306 APLP2Q06481 763 aa16.98■□□□□ 0.31
KTN1-213ENST00000554306 CAPN15O75808 1086 aa16.93■□□□□ 0.3
KTN1-213ENST00000554306 SPINK5Q9NQ38 1064 aaPredicted RBP16.92■□□□□ 0.3
KTN1-213ENST00000554306 MYCNP04198 464 aaPredicted RBP16.91■□□□□ 0.3
KTN1-213ENST00000554306 SAMD1Q6SPF0 538 aaPredicted RBP16.91■□□□□ 0.3
KTN1-213ENST00000554306 FOXD4L1Q9NU39 408 aa16.88■□□□□ 0.29
KTN1-213ENST00000554306 ZNF219Q9P2Y4 722 aaPredicted RBP16.76■□□□□ 0.27
KTN1-213ENST00000554306 DSG3P32926 999 aa16.74■□□□□ 0.27
KTN1-213ENST00000554306 TRHP20396 242 aaPredicted RBP16.72■□□□□ 0.27
KTN1-213ENST00000554306 ZBTB22O15209 634 aa16.64■□□□□ 0.25
KTN1-213ENST00000554306 ABCB7O75027 752 aa16.52■□□□□ 0.24
KTN1-213ENST00000554306 ATF5Q9Y2D1 282 aaPredicted RBP16.39■□□□□ 0.21
KTN1-213ENST00000554306 ATXN8OSP0DMR3 200 aa16.38■□□□□ 0.21
KTN1-213ENST00000554306 POLA2Q14181 598 aa16.35■□□□□ 0.21
KTN1-213ENST00000554306 CSRNP3Q8WYN3 585 aa16.19■□□□□ 0.18
KTN1-213ENST00000554306 EHMT2Q96KQ7 1210 aa16.16■□□□□ 0.18
KTN1-213ENST00000554306 ZBTB12Q9Y330 459 aaPredicted RBP16.13■□□□□ 0.17
KTN1-213ENST00000554306 RBM42Q9BTD8 480 aaKnown RBP16.04■□□□□ 0.16
KTN1-213ENST00000554306 FBLN2P98095 1184 aa15.85■□□□□ 0.13
KTN1-213ENST00000554306 OSCARQ8IYS5 282 aa15.8■□□□□ 0.12
KTN1-213ENST00000554306 AKT1S1Q96B36 256 aa15.71■□□□□ 0.11
KTN1-213ENST00000554306 MKRN4PQ13434 485 aaPredicted RBP15.66■□□□□ 0.1
KTN1-213ENST00000554306 SPDYE2BA6NHP3 402 aa15.62■□□□□ 0.09
KTN1-213ENST00000554306 SPDYE6P0CI01 402 aa15.62■□□□□ 0.09
KTN1-213ENST00000554306 SPDYE2Q495Y8 402 aa15.62■□□□□ 0.09
KTN1-213ENST00000554306 POTEHQ6S545 545 aa15.54■□□□□ 0.08
KTN1-213ENST00000554306 REM2Q8IYK8 340 aaPredicted RBP15.52■□□□□ 0.08
KTN1-213ENST00000554306 CHRDL2Q6WN34 429 aa15.5■□□□□ 0.07
KTN1-213ENST00000554306 NISCHQ9Y2I1 1504 aa15.48■□□□□ 0.07
KTN1-213ENST00000554306 ZNF692Q9BU19 519 aaPredicted RBP15.46■□□□□ 0.07
KTN1-213ENST00000554306 SSUH2Q9Y2M2 353 aa15.41■□□□□ 0.06
KTN1-213ENST00000554306 PITPNM1O00562 1244 aa15.34■□□□□ 0.05
KTN1-213ENST00000554306 SPDYE1Q8NFV5 336 aaPredicted RBP15.27■□□□□ 0.04
KTN1-213ENST00000554306 PABPN1Q86U42 306 aaKnown RBP eCLIP15.23■□□□□ 0.03
KTN1-213ENST00000554306 PIP4P2Q8N4L2 257 aa15.19■□□□□ 0.02
KTN1-213ENST00000554306 CLEC11AQ9Y240 323 aa15.19■□□□□ 0.02
KTN1-213ENST00000554306 FXR2P51116 673 aaKnown RBP eCLIP15.17■□□□□ 0.022e-10■■□□□ 13
KTN1-213ENST00000554306 SPDYE4A6NLX3 237 aa15.14■□□□□ 0.01
KTN1-213ENST00000554306 PRR29P0C7W0 189 aa15.01□□□□□ -0.01
KTN1-213ENST00000554306 PRKAR2AP13861 404 aaKnown RBP14.97□□□□□ -0.01
KTN1-213ENST00000554306 STAG3Q9UJ98 1225 aa14.96□□□□□ -0.01
KTN1-213ENST00000554306 HAX1O00165 279 aa14.84□□□□□ -0.03
KTN1-213ENST00000554306 CHADLQ6NUI6 762 aa14.82□□□□□ -0.04
KTN1-213ENST00000554306 PROM2Q8N271 834 aa14.82□□□□□ -0.04
KTN1-213ENST00000554306 SP7Q8TDD2 431 aaPredicted RBP14.73□□□□□ -0.05
KTN1-213ENST00000554306 FKBP8Q14318 412 aa14.7□□□□□ -0.06
KTN1-213ENST00000554306 FARP1Q9Y4F1 1045 aaPredicted RBP14.69□□□□□ -0.06
KTN1-213ENST00000554306 C19orf67A6NJJ6 358 aa14.67□□□□□ -0.06
KTN1-213ENST00000554306 CREBZFQ9NS37 354 aa14.67□□□□□ -0.06
KTN1-213ENST00000554306 EVX2Q03828 476 aa14.6□□□□□ -0.07
KTN1-213ENST00000554306 CD44P16070 742 aaKnown RBP14.52□□□□□ -0.09
KTN1-213ENST00000554306 NPM1P06748 294 aaKnown RBP eCLIP14.49□□□□□ -0.09
KTN1-213ENST00000554306 PLEKHG5O94827 1062 aa14.46□□□□□ -0.09
KTN1-213ENST00000554306 MNX1P50219 401 aaPredicted RBP14.45□□□□□ -0.1
KTN1-213ENST00000554306 MIER1Q8N108 512 aa14.42□□□□□ -0.1
KTN1-213ENST00000554306 PAK3O75914 559 aaPredicted RBP14.38□□□□□ -0.11
KTN1-213ENST00000554306 FBXO3Q9UK99 471 aa14.38□□□□□ -0.11
KTN1-213ENST00000554306 CLCN6P51797 869 aa14.37□□□□□ -0.11
KTN1-213ENST00000554306 GABBR2O75899 941 aa14.36□□□□□ -0.11
KTN1-213ENST00000554306 PLCD3Q8N3E9 789 aa14.36□□□□□ -0.11
KTN1-213ENST00000554306 ZRANB1Q9UGI0 708 aa14.36□□□□□ -0.11
KTN1-213ENST00000554306 ZNF579Q8NAF0 562 aaKnown RBP14.32□□□□□ -0.12
KTN1-213ENST00000554306 ZBTB47Q9UFB7 747 aaPredicted RBP14.29□□□□□ -0.12
KTN1-213ENST00000554306 TSPYL2Q9H2G4 693 aaPredicted RBP14.17□□□□□ -0.14
KTN1-213ENST00000554306 PHF12Q96QT6 1004 aa14.15□□□□□ -0.14
KTN1-213ENST00000554306 VASPP50552 380 aaPredicted RBP14.14□□□□□ -0.15
KTN1-213ENST00000554306 RASEFQ8IZ41 740 aa14.11□□□□□ -0.15
KTN1-213ENST00000554306 CCDC61Q9Y6R9 512 aa14.09□□□□□ -0.15
Retrieved 100 of 20,778 RNA–protein pairs in 68.6 ms