RNA–Protein interactions for RNA: ENST00000554233.1

IFT43-207, Transcript of intraflagellar transport 43, humanhuman

TSL 3

Gene IFT43, Length 635 nt, Biotype retained intron, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IFT43-207ENST00000554233 HPS5Q9UPZ3 1129 aa8.41□□□□□ -1.06
IFT43-207ENST00000554233 MRC2Q9UBG0 1479 aa8.4□□□□□ -1.06
IFT43-207ENST00000554233 SAMD7Q7Z3H4 446 aa8.4□□□□□ -1.06
IFT43-207ENST00000554233 RBM27Q9P2N5 1060 aaKnown RBP8.4□□□□□ -1.06
IFT43-207ENST00000554233 FANCD2Q9BXW9 1451 aa8.39□□□□□ -1.07
IFT43-207ENST00000554233 CEP164Q9UPV0 1460 aa8.39□□□□□ -1.07
IFT43-207ENST00000554233 NUTM2FA1L443 756 aa8.39□□□□□ -1.07
IFT43-207ENST00000554233 TSR3Q9UJK0 312 aaKnown RBP8.39□□□□□ -1.07
IFT43-207ENST00000554233 KDM2AQ9Y2K7 1162 aa8.38□□□□□ -1.07
IFT43-207ENST00000554233 TTC13Q8NBP0 860 aa8.37□□□□□ -1.07
IFT43-207ENST00000554233 RNF40O75150 1001 aa8.36□□□□□ -1.07
IFT43-207ENST00000554233 PPP4CP60510 307 aa8.36□□□□□ -1.07
IFT43-207ENST00000554233 PTGDRQ13258 359 aa8.36□□□□□ -1.07
IFT43-207ENST00000554233 NYAP1Q6ZVC0 841 aa8.36□□□□□ -1.07
IFT43-207ENST00000554233 URB2Q14146 1524 aaKnown RBP8.34□□□□□ -1.07
IFT43-207ENST00000554233 HDGFP51858 240 aaKnown RBP8.34□□□□□ -1.07
IFT43-207ENST00000554233 IFFO2Q5TF58 517 aa8.34□□□□□ -1.07
IFT43-207ENST00000554233 TESPA1A2RU30 521 aaPredicted RBP8.33□□□□□ -1.08
IFT43-207ENST00000554233 ITGBL1O95965 494 aaPredicted RBP8.33□□□□□ -1.08
IFT43-207ENST00000554233 ABCC8Q09428 1581 aa8.32□□□□□ -1.08
IFT43-207ENST00000554233 SWT1Q5T5J6 900 aaKnown RBP8.32□□□□□ -1.08
IFT43-207ENST00000554233 RBM26Q5T8P6 1007 aaKnown RBP8.32□□□□□ -1.08
IFT43-207ENST00000554233 EYA1Q99502 592 aa8.32□□□□□ -1.08
IFT43-207ENST00000554233 FAM161AQ3B820 660 aa8.31□□□□□ -1.08
IFT43-207ENST00000554233 DNMBPQ6XZF7 1577 aa8.31□□□□□ -1.08
IFT43-207ENST00000554233 A0A0G2JS52 829 aa8.3□□□□□ -1.08
IFT43-207ENST00000554233 FCHSD2O94868 740 aa8.3□□□□□ -1.08
IFT43-207ENST00000554233 SMYD5Q6GMV2 418 aa8.3□□□□□ -1.08
IFT43-207ENST00000554233 KCNC4Q03721 635 aa8.29□□□□□ -1.08
IFT43-207ENST00000554233 TOPBP1Q92547 1522 aa8.29□□□□□ -1.08
IFT43-207ENST00000554233 VSIG10Q8N0Z9 540 aa8.28□□□□□ -1.08
IFT43-207ENST00000554233 ADGRG1Q9Y653 693 aa8.28□□□□□ -1.08
IFT43-207ENST00000554233 SLF2Q8IX21 1173 aa8.27□□□□□ -1.09
IFT43-207ENST00000554233 RBM46Q8TBY0 533 aaKnown RBP8.27□□□□□ -1.09
IFT43-207ENST00000554233 TARBP1Q13395 1621 aaKnown RBP8.27□□□□□ -1.09
IFT43-207ENST00000554233 APLP1P51693 650 aa8.26□□□□□ -1.09
IFT43-207ENST00000554233 WDR97A6NE52 1622 aa8.25□□□□□ -1.09
IFT43-207ENST00000554233 DNAJB2P25686 324 aa8.25□□□□□ -1.09
IFT43-207ENST00000554233 SLC4A3P48751 1232 aa8.25□□□□□ -1.09
IFT43-207ENST00000554233 RCCD1A6NED2 376 aa8.24□□□□□ -1.09
IFT43-207ENST00000554233 HIC1Q14526 733 aa8.24□□□□□ -1.09
IFT43-207ENST00000554233 TJAP1Q5JTD0 557 aa8.24□□□□□ -1.09
IFT43-207ENST00000554233 MTRQ99707 1265 aa8.24□□□□□ -1.09
IFT43-207ENST00000554233 IFT140Q96RY7 1462 aa8.24□□□□□ -1.09
IFT43-207ENST00000554233 FECHP22830 423 aa8.23□□□□□ -1.09
IFT43-207ENST00000554233 NECTIN2Q92692 538 aa8.23□□□□□ -1.09
IFT43-207ENST00000554233 TMEM134Q9H6X4 195 aa8.22□□□□□ -1.09
IFT43-207ENST00000554233 CUX1P39880 1505 aa8.22□□□□□ -1.09
IFT43-207ENST00000554233 BIVM-ERCC5R4GMW8 1640 aa8.21□□□□□ -1.09
IFT43-207ENST00000554233 GNPATO15228 680 aa8.21□□□□□ -1.1
IFT43-207ENST00000554233 GPR37O15354 613 aa8.21□□□□□ -1.1
IFT43-207ENST00000554233 RGS20O76081 388 aa8.21□□□□□ -1.1
IFT43-207ENST00000554233 ZNF516Q92618 1163 aa8.21□□□□□ -1.1
IFT43-207ENST00000554233 IL21Q9HBE4 155 aa8.21□□□□□ -1.1
IFT43-207ENST00000554233 POLA1P09884 1462 aaPredicted RBP8.2□□□□□ -1.1
IFT43-207ENST00000554233 EIF4G3O43432 1585 aaKnown RBP8.2□□□□□ -1.1
IFT43-207ENST00000554233 COPS2P61201 443 aa8.2□□□□□ -1.1
IFT43-207ENST00000554233 GPIHBP1Q8IV16 184 aa8.2□□□□□ -1.1
IFT43-207ENST00000554233 PXYLP1Q8TE99 480 aa8.2□□□□□ -1.1
IFT43-207ENST00000554233 OATP04181 439 aa8.19□□□□□ -1.1
IFT43-207ENST00000554233 TOP2BQ02880 1626 aa8.18□□□□□ -1.1
IFT43-207ENST00000554233 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP8.18□□□□□ -1.1
IFT43-207ENST00000554233 METTL3Q86U44 580 aaKnown RBP8.18□□□□□ -1.1
IFT43-207ENST00000554233 SUPT5HO00267 1087 aaKnown RBP8.17□□□□□ -1.1
IFT43-207ENST00000554233 ZNF608Q9ULD9 1512 aaPredicted RBP8.17□□□□□ -1.1
IFT43-207ENST00000554233 SLC10A3P09131 477 aa8.16□□□□□ -1.1
IFT43-207ENST00000554233 FGD5Q6ZNL6 1462 aa8.16□□□□□ -1.1
IFT43-207ENST00000554233 NKX2-3Q8TAU0 364 aa8.16□□□□□ -1.1
IFT43-207ENST00000554233 PRR14Q9BWN1 585 aa8.16□□□□□ -1.1
IFT43-207ENST00000554233 PCDHB3Q9Y5E6 796 aa8.16□□□□□ -1.1
IFT43-207ENST00000554233 CFHP08603 1231 aa8.15□□□□□ -1.1
IFT43-207ENST00000554233 NLRP7Q8WX94 980 aa8.15□□□□□ -1.1
IFT43-207ENST00000554233 CHD1O14646 1710 aa8.15□□□□□ -1.11
IFT43-207ENST00000554233 PBRM1Q86U86 1689 aa8.14□□□□□ -1.11
IFT43-207ENST00000554233 ABCA5Q8WWZ7 1642 aa8.14□□□□□ -1.11
IFT43-207ENST00000554233 ABCA10Q8WWZ4 1543 aa8.14□□□□□ -1.11
IFT43-207ENST00000554233 TULP1O00294 542 aaPredicted RBP8.14□□□□□ -1.11
IFT43-207ENST00000554233 KMT5BQ4FZB7 885 aa8.14□□□□□ -1.11
IFT43-207ENST00000554233 PPP1R18Q6NYC8 613 aa8.14□□□□□ -1.11
IFT43-207ENST00000554233 BLOC1S3Q6QNY0 202 aa8.14□□□□□ -1.11
IFT43-207ENST00000554233 ZPR1O75312 459 aa8.13□□□□□ -1.11
IFT43-207ENST00000554233 SYNJ1O43426 1573 aa8.13□□□□□ -1.11
IFT43-207ENST00000554233 SOGA1O94964 1423 aa8.12□□□□□ -1.11
IFT43-207ENST00000554233 ACTN4O43707 911 aaKnown RBP8.12□□□□□ -1.11
IFT43-207ENST00000554233 IRX2Q9BZI1 471 aaPredicted RBP8.12□□□□□ -1.11
IFT43-207ENST00000554233 RAD54L2Q9Y4B4 1467 aa8.12□□□□□ -1.11
IFT43-207ENST00000554233 PHOX2BQ99453 314 aa8.11□□□□□ -1.11
IFT43-207ENST00000554233 WRNQ14191 1432 aaPredicted RBP eCLIP8.11□□□□□ -1.11
IFT43-207ENST00000554233 RDH13Q8NBN7 331 aa8.1□□□□□ -1.11
IFT43-207ENST00000554233 EIF4ENIF1Q9NRA8 985 aaKnown RBP8.1□□□□□ -1.11
IFT43-207ENST00000554233 DAXXQ9UER7 740 aaPredicted RBP8.1□□□□□ -1.11
IFT43-207ENST00000554233 AQRO60306 1485 aaKnown RBP eCLIP8.09□□□□□ -1.11
IFT43-207ENST00000554233 MAGI1Q96QZ7 1491 aaPredicted RBP8.09□□□□□ -1.11
IFT43-207ENST00000554233 DDX11L8A8MPP1 907 aa8.09□□□□□ -1.11
IFT43-207ENST00000554233 TLL1O43897 1013 aa8.09□□□□□ -1.11
IFT43-207ENST00000554233 RSPH4AQ5TD94 716 aa8.09□□□□□ -1.11
IFT43-207ENST00000554233 PRKD2Q9BZL6 878 aa8.08□□□□□ -1.12
IFT43-207ENST00000554233 GRIN2BQ13224 1484 aa8.07□□□□□ -1.12
IFT43-207ENST00000554233 GGCXP38435 758 aa8.07□□□□□ -1.12
IFT43-207ENST00000554233 PUS10Q3MIT2 529 aaKnown RBP8.07□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 33.7 ms