RNA–Protein interactions for RNA: ENST00000554233.1

IFT43-207, Transcript of intraflagellar transport 43, humanhuman

TSL 3

Gene IFT43, Length 635 nt, Biotype retained intron, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IFT43-207ENST00000554233 AEBP2Q6ZN18 517 aaPredicted RBP20.71■□□□□ 0.91
IFT43-207ENST00000554233 CHIC1Q5VXU3 224 aa19.85■□□□□ 0.77
IFT43-207ENST00000554233 SENP3Q9H4L4 574 aaPredicted RBP17.6■□□□□ 0.41
IFT43-207ENST00000554233 PHF23Q9BUL5 403 aaPredicted RBP17.44■□□□□ 0.38
IFT43-207ENST00000554233 FOXD1Q16676 465 aa16.4■□□□□ 0.22
IFT43-207ENST00000554233 PLPPR3Q6T4P5 718 aa15.96■□□□□ 0.15
IFT43-207ENST00000554233 PPP6R1Q9UPN7 881 aa15.51■□□□□ 0.07
IFT43-207ENST00000554233 ADRA2BP18089 450 aa15.5■□□□□ 0.07
IFT43-207ENST00000554233 PIAS4Q8N2W9 510 aaPredicted RBP15.39■□□□□ 0.05
IFT43-207ENST00000554233 MSH5O43196 834 aa15.23■□□□□ 0.03
IFT43-207ENST00000554233 POTEDQ86YR6 584 aa14.53□□□□□ -0.08
IFT43-207ENST00000554233 MAPK8IP2Q13387 824 aaPredicted RBP14.18□□□□□ -0.14
IFT43-207ENST00000554233 SCAF1Q9H7N4 1312 aaKnown RBP14.14□□□□□ -0.15
IFT43-207ENST00000554233 PPP4R3CPQ6ZMV5 832 aa14.05□□□□□ -0.16
IFT43-207ENST00000554233 DMRT2Q9Y5R5 561 aa13.99□□□□□ -0.17
IFT43-207ENST00000554233 CNKSR2Q8WXI2 1034 aa13.71□□□□□ -0.21
IFT43-207ENST00000554233 HOXD11P31277 338 aaPredicted RBP13.55□□□□□ -0.24
IFT43-207ENST00000554233 NCBP3Q53F19 620 aaKnown RBP13.55□□□□□ -0.24
IFT43-207ENST00000554233 RNF216Q9NWF9 866 aaPredicted RBP13.52□□□□□ -0.25
IFT43-207ENST00000554233 DCAF8L1A6NGE4 600 aa13.48□□□□□ -0.25
IFT43-207ENST00000554233 NPM3O75607 178 aaKnown RBP13.37□□□□□ -0.27
IFT43-207ENST00000554233 KCNA4P22459 653 aa13.33□□□□□ -0.28
IFT43-207ENST00000554233 RNF39Q9H2S5 420 aa13.03□□□□□ -0.32
IFT43-207ENST00000554233 CACNB1Q02641 598 aaPredicted RBP12.99□□□□□ -0.33
IFT43-207ENST00000554233 DNAJC5BQ9UF47 199 aa12.99□□□□□ -0.33
IFT43-207ENST00000554233 GRWD1Q9BQ67 446 aaKnown RBP eCLIP12.96□□□□□ -0.33
IFT43-207ENST00000554233 C1QBPQ07021 282 aaKnown RBP12.83□□□□□ -0.36
IFT43-207ENST00000554233 SLC4A2P04920 1241 aa12.71□□□□□ -0.37
IFT43-207ENST00000554233 U3KPZ7 1027 aaPredicted RBP12.71□□□□□ -0.37
IFT43-207ENST00000554233 SLC4A1APQ9BWU0 796 aaKnown RBP12.62□□□□□ -0.39
IFT43-207ENST00000554233 SPINK5Q9NQ38 1064 aaPredicted RBP12.48□□□□□ -0.41
IFT43-207ENST00000554233 CAPN15O75808 1086 aa12.45□□□□□ -0.42
IFT43-207ENST00000554233 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP12.38□□□□□ -0.43
IFT43-207ENST00000554233 HNRNPUL2Q1KMD3 747 aaKnown RBP12.38□□□□□ -0.43
IFT43-207ENST00000554233 MYCNP04198 464 aaPredicted RBP12.35□□□□□ -0.43
IFT43-207ENST00000554233 APLP2Q06481 763 aa12.34□□□□□ -0.43
IFT43-207ENST00000554233 FOXD4L1Q9NU39 408 aa12.34□□□□□ -0.43
IFT43-207ENST00000554233 SAMD1Q6SPF0 538 aaPredicted RBP12.33□□□□□ -0.44
IFT43-207ENST00000554233 TRHP20396 242 aaPredicted RBP12.31□□□□□ -0.44
IFT43-207ENST00000554233 DSG3P32926 999 aa12.29□□□□□ -0.44
IFT43-207ENST00000554233 ZBTB22O15209 634 aa12.25□□□□□ -0.45
IFT43-207ENST00000554233 ZNF219Q9P2Y4 722 aaPredicted RBP12.25□□□□□ -0.45
IFT43-207ENST00000554233 ABCB7O75027 752 aa12.19□□□□□ -0.46
IFT43-207ENST00000554233 ATF5Q9Y2D1 282 aaPredicted RBP12.08□□□□□ -0.48
IFT43-207ENST00000554233 POLA2Q14181 598 aa12.01□□□□□ -0.49
IFT43-207ENST00000554233 ATXN8OSP0DMR3 200 aa11.91□□□□□ -0.5
IFT43-207ENST00000554233 EHMT2Q96KQ7 1210 aa11.9□□□□□ -0.5
IFT43-207ENST00000554233 CSRNP3Q8WYN3 585 aa11.89□□□□□ -0.51
IFT43-207ENST00000554233 ZBTB12Q9Y330 459 aaPredicted RBP11.73□□□□□ -0.53
IFT43-207ENST00000554233 RBM42Q9BTD8 480 aaKnown RBP11.7□□□□□ -0.54
IFT43-207ENST00000554233 OSCARQ8IYS5 282 aa11.62□□□□□ -0.55
IFT43-207ENST00000554233 FBLN2P98095 1184 aa11.57□□□□□ -0.56
IFT43-207ENST00000554233 MKRN4PQ13434 485 aaPredicted RBP11.52□□□□□ -0.57
IFT43-207ENST00000554233 AKT1S1Q96B36 256 aa11.49□□□□□ -0.57
IFT43-207ENST00000554233 POTEHQ6S545 545 aa11.42□□□□□ -0.58
IFT43-207ENST00000554233 SPDYE2BA6NHP3 402 aa11.4□□□□□ -0.58
IFT43-207ENST00000554233 SPDYE6P0CI01 402 aa11.4□□□□□ -0.58
IFT43-207ENST00000554233 SPDYE2Q495Y8 402 aa11.4□□□□□ -0.58
IFT43-207ENST00000554233 NISCHQ9Y2I1 1504 aa11.4□□□□□ -0.59
IFT43-207ENST00000554233 REM2Q8IYK8 340 aaPredicted RBP11.39□□□□□ -0.59
IFT43-207ENST00000554233 CHRDL2Q6WN34 429 aa11.38□□□□□ -0.59
IFT43-207ENST00000554233 ZNF692Q9BU19 519 aaPredicted RBP11.34□□□□□ -0.59
IFT43-207ENST00000554233 PITPNM1O00562 1244 aa11.28□□□□□ -0.6
IFT43-207ENST00000554233 SSUH2Q9Y2M2 353 aa11.27□□□□□ -0.61
IFT43-207ENST00000554233 CLEC11AQ9Y240 323 aa11.19□□□□□ -0.62
IFT43-207ENST00000554233 PABPN1Q86U42 306 aaKnown RBP eCLIP11.18□□□□□ -0.62
IFT43-207ENST00000554233 PIP4P2Q8N4L2 257 aa11.16□□□□□ -0.62
IFT43-207ENST00000554233 SPDYE1Q8NFV5 336 aaPredicted RBP11.16□□□□□ -0.62
IFT43-207ENST00000554233 FXR2P51116 673 aaKnown RBP eCLIP11.11□□□□□ -0.63
IFT43-207ENST00000554233 SPDYE4A6NLX3 237 aa11.1□□□□□ -0.63
IFT43-207ENST00000554233 PRR29P0C7W0 189 aa11.01□□□□□ -0.65
IFT43-207ENST00000554233 PRKAR2AP13861 404 aaKnown RBP11□□□□□ -0.65
IFT43-207ENST00000554233 CHADLQ6NUI6 762 aa10.95□□□□□ -0.66
IFT43-207ENST00000554233 HAX1O00165 279 aa10.92□□□□□ -0.66
IFT43-207ENST00000554233 STAG3Q9UJ98 1225 aa10.88□□□□□ -0.67
IFT43-207ENST00000554233 PROM2Q8N271 834 aa10.81□□□□□ -0.68
IFT43-207ENST00000554233 SP7Q8TDD2 431 aaPredicted RBP10.81□□□□□ -0.68
IFT43-207ENST00000554233 EVX2Q03828 476 aa10.8□□□□□ -0.68
IFT43-207ENST00000554233 FKBP8Q14318 412 aa10.79□□□□□ -0.68
IFT43-207ENST00000554233 CREBZFQ9NS37 354 aa10.77□□□□□ -0.69
IFT43-207ENST00000554233 FARP1Q9Y4F1 1045 aaPredicted RBP10.77□□□□□ -0.69
IFT43-207ENST00000554233 C19orf67A6NJJ6 358 aa10.75□□□□□ -0.69
IFT43-207ENST00000554233 CD44P16070 742 aaKnown RBP10.66□□□□□ -0.7
IFT43-207ENST00000554233 MNX1P50219 401 aaPredicted RBP10.59□□□□□ -0.71
IFT43-207ENST00000554233 NPM1P06748 294 aaKnown RBP eCLIP10.58□□□□□ -0.72
IFT43-207ENST00000554233 MIER1Q8N108 512 aa10.57□□□□□ -0.72
IFT43-207ENST00000554233 GABBR2O75899 941 aa10.56□□□□□ -0.72
IFT43-207ENST00000554233 ZRANB1Q9UGI0 708 aa10.55□□□□□ -0.72
IFT43-207ENST00000554233 PLEKHG5O94827 1062 aa10.53□□□□□ -0.72
IFT43-207ENST00000554233 PLCD3Q8N3E9 789 aa10.52□□□□□ -0.73
IFT43-207ENST00000554233 PAK3O75914 559 aaPredicted RBP10.5□□□□□ -0.73
IFT43-207ENST00000554233 ZNF579Q8NAF0 562 aaKnown RBP10.47□□□□□ -0.73
IFT43-207ENST00000554233 FBXO3Q9UK99 471 aa10.46□□□□□ -0.73
IFT43-207ENST00000554233 PHF12Q96QT6 1004 aa10.43□□□□□ -0.74
IFT43-207ENST00000554233 TSPYL2Q9H2G4 693 aaPredicted RBP10.43□□□□□ -0.74
IFT43-207ENST00000554233 CLCN6P51797 869 aa10.4□□□□□ -0.74
IFT43-207ENST00000554233 RASEFQ8IZ41 740 aa10.38□□□□□ -0.75
IFT43-207ENST00000554233 ZBTB47Q9UFB7 747 aaPredicted RBP10.38□□□□□ -0.75
IFT43-207ENST00000554233 GALR2O43603 387 aaPredicted RBP10.36□□□□□ -0.75
IFT43-207ENST00000554233 VASPP50552 380 aaPredicted RBP10.35□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 68.2 ms