RNA–Protein interactions for RNA: ENST00000553945.1

NEK9-203, Transcript of NIMA related kinase 9, humanhuman

TSL 5

Gene NEK9, Length 786 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEK9-203ENST00000553945 HDGFP51858 240 aaKnown RBP34.46■■■■□ 3.11
NEK9-203ENST00000553945 KIF1BO60333 1816 aa34.45■■■■□ 3.11
NEK9-203ENST00000553945 PPP1R15AO75807 674 aaPredicted RBP34.44■■■■□ 3.1
NEK9-203ENST00000553945 HRCP23327 699 aa34.44■■■■□ 3.1
NEK9-203ENST00000553945 ZNF326Q5BKZ1 582 aaKnown RBP34.42■■■■□ 3.1
NEK9-203ENST00000553945 ABCF1Q8NE71 845 aaKnown RBP eCLIP34.42■■■■□ 3.1
NEK9-203ENST00000553945 NUTM2DQ5VT03 806 aaPredicted RBP34.41■■■■□ 3.1
NEK9-203ENST00000553945 BCANQ96GW7 911 aa34.41■■■■□ 3.1
NEK9-203ENST00000553945 SENP3Q9H4L4 574 aaPredicted RBP34.4■■■■□ 3.1
NEK9-203ENST00000553945 CCDC144AA2RUR9 1427 aa34.36■■■■□ 3.09
NEK9-203ENST00000553945 PLEKHG1Q9ULL1 1385 aa34.36■■■■□ 3.09
NEK9-203ENST00000553945 SLC26A8Q96RN1 970 aa34.35■■■■□ 3.09
NEK9-203ENST00000553945 CPS1P31327 1500 aa34.31■■■■□ 3.08
NEK9-203ENST00000553945 STRCP1A6NGW2 1772 aa34.29■■■■□ 3.08
NEK9-203ENST00000553945 TRIM26Q12899 539 aaPredicted RBP34.28■■■■□ 3.08
NEK9-203ENST00000553945 ILDR1Q86SU0 546 aaPredicted RBP34.28■■■■□ 3.08
NEK9-203ENST00000553945 FBXO41Q8TF61 875 aa34.28■■■■□ 3.08
NEK9-203ENST00000553945 NEXMIFQ5QGS0 1516 aa34.28■■■■□ 3.08
NEK9-203ENST00000553945 IQSEC2Q5JU85 1478 aa34.26■■■■□ 3.07
NEK9-203ENST00000553945 RGL3Q3MIN7 710 aa34.2■■■■□ 3.07
NEK9-203ENST00000553945 RPGRIP1LQ68CZ1 1315 aa34.2■■■■□ 3.07
NEK9-203ENST00000553945 ADAMTS13Q76LX8 1427 aa34.2■■■■□ 3.06
NEK9-203ENST00000553945 TBX22Q9Y458 520 aa34.19■■■■□ 3.06
NEK9-203ENST00000553945 SPATA31E1Q6ZUB1 1445 aa34.19■■■■□ 3.06
NEK9-203ENST00000553945 ANKRD30BQ9BXX2 1392 aa34.18■■■■□ 3.06
NEK9-203ENST00000553945 DIP2AQ14689 1571 aa34.18■■■■□ 3.06
NEK9-203ENST00000553945 PPLO60437 1756 aa34.17■■■■□ 3.06
NEK9-203ENST00000553945 KCNA6P17658 529 aa34.16■■■■□ 3.06
NEK9-203ENST00000553945 SETBP1Q9Y6X0 1596 aa34.15■■■■□ 3.06
NEK9-203ENST00000553945 LRRC7Q96NW7 1537 aa34.15■■■■□ 3.06
NEK9-203ENST00000553945 VGFO15240 615 aaPredicted RBP34.15■■■■□ 3.06
NEK9-203ENST00000553945 NRXN3Q9Y4C0 1643 aa34.15■■■■□ 3.06
NEK9-203ENST00000553945 CHD2O14647 1828 aaKnown RBP34.11■■■■□ 3.05
NEK9-203ENST00000553945 NWD1Q149M9 1564 aa34.11■■■■□ 3.05
NEK9-203ENST00000553945 IFT172Q9UG01 1749 aa34.08■■■■□ 3.05
NEK9-203ENST00000553945 UBAP1LF5GYI3 381 aa34.07■■■■□ 3.04
NEK9-203ENST00000553945 PIK3R4Q99570 1358 aa34.06■■■■□ 3.04
NEK9-203ENST00000553945 PROSER2Q86WR7 435 aaPredicted RBP34.05■■■■□ 3.04
NEK9-203ENST00000553945 NKTRP30414 1462 aaKnown RBP34.05■■■■□ 3.04
NEK9-203ENST00000553945 XIRP1Q702N8 1843 aaKnown RBP34.03■■■■□ 3.04
NEK9-203ENST00000553945 ADGRF5Q8IZF2 1346 aa34.01■■■■□ 3.03
NEK9-203ENST00000553945 METP08581 1390 aa34■■■■□ 3.03
NEK9-203ENST00000553945 TMEM94Q12767 1356 aa34■■■■□ 3.03
NEK9-203ENST00000553945 RBM33Q96EV2 1170 aaKnown RBP34■■■■□ 3.03
NEK9-203ENST00000553945 PTPRUQ92729 1446 aa33.99■■■■□ 3.03
NEK9-203ENST00000553945 ALKQ9UM73 1620 aa33.98■■■■□ 3.03
NEK9-203ENST00000553945 AMOTL2Q9Y2J4 779 aa33.98■■■■□ 3.03
NEK9-203ENST00000553945 TOM1O60784 492 aa33.96■■■■□ 3.03
NEK9-203ENST00000553945 SETD1AO15047 1707 aaKnown RBP33.96■■■■□ 3.03
NEK9-203ENST00000553945 XRN1Q8IZH2 1706 aaKnown RBP33.93■■■■□ 3.02
NEK9-203ENST00000553945 MYOM2P54296 1465 aa33.89■■■■□ 3.02
NEK9-203ENST00000553945 SCAF1Q9H7N4 1312 aaKnown RBP33.89■■■■□ 3.02
NEK9-203ENST00000553945 PIP4K2BP78356 416 aa33.89■■■■□ 3.02
NEK9-203ENST00000553945 PIK3C2GO75747 1445 aa33.88■■■■□ 3.01
NEK9-203ENST00000553945 DHX57Q6P158 1386 aaKnown RBP33.87■■■■□ 3.01
NEK9-203ENST00000553945 C14orf37Q86TY3 774 aa33.85■■■■□ 3.01
NEK9-203ENST00000553945 DCAF11Q8TEB1 546 aa33.85■■■■□ 3.01
NEK9-203ENST00000553945 KDM2AQ9Y2K7 1162 aa33.84■■■■□ 3.01
NEK9-203ENST00000553945 NRXN1Q9ULB1 1477 aa33.83■■■■□ 3.01
NEK9-203ENST00000553945 MSH6P52701 1360 aa33.83■■■■□ 3.01
NEK9-203ENST00000553945 NCOA3Q9Y6Q9 1424 aa33.81■■■■□ 3
NEK9-203ENST00000553945 PCGF6Q9BYE7 350 aa33.78■■■■□ 3
NEK9-203ENST00000553945 C14orf93Q9H972 538 aaKnown RBP33.77■■■■□ 3
NEK9-203ENST00000553945 LAMC1P11047 1609 aa33.77■■■■□ 3
NEK9-203ENST00000553945 CFAP70Q5T0N1 1121 aa33.76■■■□□ 2.99
NEK9-203ENST00000553945 TMEM132EQ6IEE7 984 aa33.76■■■□□ 2.99
NEK9-203ENST00000553945 SIN3AQ96ST3 1273 aa33.76■■■□□ 2.99
NEK9-203ENST00000553945 ASXL1Q8IXJ9 1541 aa33.75■■■□□ 2.99
NEK9-203ENST00000553945 STAC3Q96MF2 364 aa33.75■■■□□ 2.99
NEK9-203ENST00000553945 PTCH1Q13635 1447 aa33.74■■■□□ 2.99
NEK9-203ENST00000553945 STK26Q9P289 416 aa33.74■■■□□ 2.99
NEK9-203ENST00000553945 SIPA1L2Q9P2F8 1722 aaPredicted RBP33.73■■■□□ 2.99
NEK9-203ENST00000553945 ROBO2Q9HCK4 1378 aa33.72■■■□□ 2.99
NEK9-203ENST00000553945 NEUROD1Q13562 356 aa33.72■■■□□ 2.99
NEK9-203ENST00000553945 C19orf44Q9H6X5 657 aa33.72■■■□□ 2.99
NEK9-203ENST00000553945 PRAG1Q86YV5 1406 aa33.7■■■□□ 2.99
NEK9-203ENST00000553945 LRPPRCP42704 1394 aaKnown RBP33.7■■■□□ 2.98
NEK9-203ENST00000553945 ATF3P18847 181 aa33.68■■■□□ 2.98
NEK9-203ENST00000553945 YTHDC2Q9H6S0 1430 aaKnown RBP33.67■■■□□ 2.98
NEK9-203ENST00000553945 NALCNQ8IZF0 1738 aa33.66■■■□□ 2.98
NEK9-203ENST00000553945 KNDC1Q76NI1 1749 aa33.65■■■□□ 2.98
NEK9-203ENST00000553945 CADPS2Q86UW7 1296 aa33.65■■■□□ 2.98
NEK9-203ENST00000553945 SLAIN2Q9P270 581 aa33.65■■■□□ 2.98
NEK9-203ENST00000553945 ADGRL3Q9HAR2 1447 aa33.64■■■□□ 2.98
NEK9-203ENST00000553945 ABCC11Q96J66 1382 aa33.64■■■□□ 2.98
NEK9-203ENST00000553945 TECPR2O15040 1411 aa33.63■■■□□ 2.97
NEK9-203ENST00000553945 HSPA1LP34931 641 aa33.63■■■□□ 2.97
NEK9-203ENST00000553945 L3MBTL2Q969R5 705 aa33.61■■■□□ 2.97
NEK9-203ENST00000553945 DCCP43146 1447 aa33.61■■■□□ 2.97
NEK9-203ENST00000553945 FAM135BQ49AJ0 1406 aa33.61■■■□□ 2.97
NEK9-203ENST00000553945 ROBO1Q9Y6N7 1651 aa33.6■■■□□ 2.97
NEK9-203ENST00000553945 WAPLQ7Z5K2 1190 aa33.58■■■□□ 2.97
NEK9-203ENST00000553945 ADGRB1O14514 1584 aa33.58■■■□□ 2.97
NEK9-203ENST00000553945 PLEKHH1Q9ULM0 1364 aa33.53■■■□□ 2.96
NEK9-203ENST00000553945 SIRT1Q96EB6 747 aa33.52■■■□□ 2.96
NEK9-203ENST00000553945 KIAA1210Q9ULL0 1709 aa33.52■■■□□ 2.96
NEK9-203ENST00000553945 TRAK1Q9UPV9 953 aa33.5■■■□□ 2.95
NEK9-203ENST00000553945 MST1RQ04912 1400 aa33.5■■■□□ 2.95
NEK9-203ENST00000553945 PRAM1Q96QH2 718 aa33.48■■■□□ 2.95
NEK9-203ENST00000553945 DLC1Q96QB1 1528 aa33.48■■■□□ 2.95
Retrieved 100 of 20,778 RNA–protein pairs in 13.3 ms