RNA–Protein interactions for RNA: ENST00000553527.1

TDP1-205, Transcript of tyrosyl-DNA phosphodiesterase 1, humanhuman

TSL 3

Gene TDP1, Length 910 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TDP1-205ENST00000553527 IQSEC2Q5JU85 1478 aa35.24■■■■□ 3.23
TDP1-205ENST00000553527 STRCP1A6NGW2 1772 aa35.24■■■■□ 3.23
TDP1-205ENST00000553527 CPS1P31327 1500 aa35.24■■■■□ 3.23
TDP1-205ENST00000553527 UBAP1LF5GYI3 381 aa35.2■■■■□ 3.23
TDP1-205ENST00000553527 ZFYVE9O95405 1425 aa35.19■■■■□ 3.22
TDP1-205ENST00000553527 FOXD1Q16676 465 aa35.18■■■■□ 3.22
TDP1-205ENST00000553527 ZNF326Q5BKZ1 582 aaKnown RBP35.17■■■■□ 3.22
TDP1-205ENST00000553527 ABCF1Q8NE71 845 aaKnown RBP eCLIP35.16■■■■□ 3.22
TDP1-205ENST00000553527 SETD5Q9C0A6 1442 aa35.15■■■■□ 3.22
TDP1-205ENST00000553527 CLTCL1P53675 1640 aa35.14■■■■□ 3.22
TDP1-205ENST00000553527 TRPM2O94759 1503 aa35.11■■■■□ 3.21
TDP1-205ENST00000553527 KIF1BO60333 1816 aa35.11■■■■□ 3.21
TDP1-205ENST00000553527 MPHOSPH9Q99550 1183 aa35.11■■■■□ 3.21
TDP1-205ENST00000553527 PLEKHG1Q9ULL1 1385 aa35.11■■■■□ 3.21
TDP1-205ENST00000553527 LRRC7Q96NW7 1537 aa35.08■■■■□ 3.21
TDP1-205ENST00000553527 SCAF1Q9H7N4 1312 aaKnown RBP35.06■■■■□ 3.2
TDP1-205ENST00000553527 RAB3GAP2Q9H2M9 1393 aa35.04■■■■□ 3.2
TDP1-205ENST00000553527 KCNA6P17658 529 aa35.04■■■■□ 3.2
TDP1-205ENST00000553527 PIP4K2BP78356 416 aa35.04■■■■□ 3.2
TDP1-205ENST00000553527 TOM1O60784 492 aa35.03■■■■□ 3.2
TDP1-205ENST00000553527 RBM33Q96EV2 1170 aaKnown RBP35■■■■□ 3.19
TDP1-205ENST00000553527 PROSER2Q86WR7 435 aaPredicted RBP34.98■■■■□ 3.19
TDP1-205ENST00000553527 TBX22Q9Y458 520 aa34.98■■■■□ 3.19
TDP1-205ENST00000553527 ACIN1Q9UKV3 1341 aaKnown RBP34.98■■■■□ 3.19
TDP1-205ENST00000553527 XIRP1Q702N8 1843 aaKnown RBP34.97■■■■□ 3.19
TDP1-205ENST00000553527 CHD2O14647 1828 aaKnown RBP34.95■■■■□ 3.19
TDP1-205ENST00000553527 ADAMTS13Q76LX8 1427 aa34.94■■■■□ 3.18
TDP1-205ENST00000553527 NEXMIFQ5QGS0 1516 aa34.91■■■■□ 3.18
TDP1-205ENST00000553527 TMEM94Q12767 1356 aa34.9■■■■□ 3.18
TDP1-205ENST00000553527 CCDC144AA2RUR9 1427 aa34.89■■■■□ 3.18
TDP1-205ENST00000553527 NWD1Q149M9 1564 aa34.87■■■■□ 3.17
TDP1-205ENST00000553527 RGL3Q3MIN7 710 aa34.87■■■■□ 3.17
TDP1-205ENST00000553527 DIP2AQ14689 1571 aa34.86■■■■□ 3.17
TDP1-205ENST00000553527 NRXN3Q9Y4C0 1643 aa34.84■■■■□ 3.17
TDP1-205ENST00000553527 NKTRP30414 1462 aaKnown RBP34.84■■■■□ 3.17
TDP1-205ENST00000553527 VGFO15240 615 aaPredicted RBP34.83■■■■□ 3.17
TDP1-205ENST00000553527 ALKQ9UM73 1620 aa34.83■■■■□ 3.17
TDP1-205ENST00000553527 RPGRIP1LQ68CZ1 1315 aa34.81■■■■□ 3.16
TDP1-205ENST00000553527 AMOTL2Q9Y2J4 779 aa34.81■■■■□ 3.16
TDP1-205ENST00000553527 SETBP1Q9Y6X0 1596 aa34.81■■■■□ 3.16
TDP1-205ENST00000553527 PPLO60437 1756 aa34.79■■■■□ 3.16
TDP1-205ENST00000553527 PIK3R4Q99570 1358 aa34.78■■■■□ 3.16
TDP1-205ENST00000553527 C14orf37Q86TY3 774 aa34.77■■■■□ 3.16
TDP1-205ENST00000553527 PTPRUQ92729 1446 aa34.76■■■■□ 3.16
TDP1-205ENST00000553527 HRCP23327 699 aa34.76■■■■□ 3.16
TDP1-205ENST00000553527 HSPA1LP34931 641 aa34.76■■■■□ 3.16
TDP1-205ENST00000553527 METP08581 1390 aa34.75■■■■□ 3.15
TDP1-205ENST00000553527 MSH6P52701 1360 aa34.73■■■■□ 3.15
TDP1-205ENST00000553527 SPATA31E1Q6ZUB1 1445 aa34.71■■■■□ 3.15
TDP1-205ENST00000553527 TRIM26Q12899 539 aaPredicted RBP34.7■■■■□ 3.15
TDP1-205ENST00000553527 ADGRF5Q8IZF2 1346 aa34.67■■■■□ 3.14
TDP1-205ENST00000553527 XRN1Q8IZH2 1706 aaKnown RBP34.63■■■■□ 3.13
TDP1-205ENST00000553527 IFT172Q9UG01 1749 aa34.63■■■■□ 3.13
TDP1-205ENST00000553527 ANKRD30BQ9BXX2 1392 aa34.62■■■■□ 3.13
TDP1-205ENST00000553527 SETD1AO15047 1707 aaKnown RBP34.61■■■■□ 3.13
TDP1-205ENST00000553527 NCOA3Q9Y6Q9 1424 aa34.59■■■■□ 3.13
TDP1-205ENST00000553527 C19orf44Q9H6X5 657 aa34.59■■■■□ 3.13
TDP1-205ENST00000553527 SLAIN2Q9P270 581 aa34.59■■■■□ 3.13
TDP1-205ENST00000553527 SIPA1L2Q9P2F8 1722 aaPredicted RBP34.58■■■■□ 3.13
TDP1-205ENST00000553527 ATF3P18847 181 aa34.57■■■■□ 3.12
TDP1-205ENST00000553527 ROBO1Q9Y6N7 1651 aa34.54■■■■□ 3.12
TDP1-205ENST00000553527 FAM135BQ49AJ0 1406 aa34.54■■■■□ 3.12
TDP1-205ENST00000553527 CADPS2Q86UW7 1296 aa34.52■■■■□ 3.12
TDP1-205ENST00000553527 DISP3Q9P2K9 1392 aa34.5■■■■□ 3.11
TDP1-205ENST00000553527 TMEM132EQ6IEE7 984 aa34.49■■■■□ 3.11
TDP1-205ENST00000553527 STK26Q9P289 416 aa34.49■■■■□ 3.11
TDP1-205ENST00000553527 KDM2AQ9Y2K7 1162 aa34.48■■■■□ 3.11
TDP1-205ENST00000553527 ROBO2Q9HCK4 1378 aa34.46■■■■□ 3.11
TDP1-205ENST00000553527 PIK3C2GO75747 1445 aa34.45■■■■□ 3.11
TDP1-205ENST00000553527 DCAF11Q8TEB1 546 aa34.44■■■■□ 3.1
TDP1-205ENST00000553527 NALCNQ8IZF0 1738 aa34.41■■■■□ 3.1
TDP1-205ENST00000553527 CFAP70Q5T0N1 1121 aa34.41■■■■□ 3.1
TDP1-205ENST00000553527 PTCH1Q13635 1447 aa34.39■■■■□ 3.1
TDP1-205ENST00000553527 C14orf93Q9H972 538 aaKnown RBP34.39■■■■□ 3.1
TDP1-205ENST00000553527 MYOM2P54296 1465 aa34.39■■■■□ 3.1
TDP1-205ENST00000553527 ADGRL3Q9HAR2 1447 aa34.38■■■■□ 3.09
TDP1-205ENST00000553527 PHLPP1O60346 1717 aa34.35■■■■□ 3.09
TDP1-205ENST00000553527 WAPLQ7Z5K2 1190 aa34.35■■■■□ 3.09
TDP1-205ENST00000553527 DCCP43146 1447 aa34.35■■■■□ 3.09
TDP1-205ENST00000553527 ASXL1Q8IXJ9 1541 aa34.35■■■■□ 3.09
TDP1-205ENST00000553527 NRXN1Q9ULB1 1477 aa34.34■■■■□ 3.09
TDP1-205ENST00000553527 LRPPRCP42704 1394 aaKnown RBP34.34■■■■□ 3.09
TDP1-205ENST00000553527 PCGF6Q9BYE7 350 aa34.31■■■■□ 3.08
TDP1-205ENST00000553527 YTHDC2Q9H6S0 1430 aaKnown RBP34.3■■■■□ 3.08
TDP1-205ENST00000553527 BRINP3Q76B58 766 aa34.3■■■■□ 3.08
TDP1-205ENST00000553527 MST1RQ04912 1400 aa34.3■■■■□ 3.08
TDP1-205ENST00000553527 MED1Q15648 1581 aaPredicted RBP34.29■■■■□ 3.08
TDP1-205ENST00000553527 LAMC1P11047 1609 aa34.29■■■■□ 3.08
TDP1-205ENST00000553527 PRAG1Q86YV5 1406 aa34.29■■■■□ 3.08
TDP1-205ENST00000553527 DHX57Q6P158 1386 aaKnown RBP34.28■■■■□ 3.08
TDP1-205ENST00000553527 ABCC11Q96J66 1382 aa34.28■■■■□ 3.08
TDP1-205ENST00000553527 KNDC1Q76NI1 1749 aa34.26■■■■□ 3.07
TDP1-205ENST00000553527 PLEKHH1Q9ULM0 1364 aa34.24■■■■□ 3.07
TDP1-205ENST00000553527 TECPR2O15040 1411 aa34.24■■■■□ 3.07
TDP1-205ENST00000553527 STAC3Q96MF2 364 aa34.22■■■■□ 3.07
TDP1-205ENST00000553527 SIN3AQ96ST3 1273 aa34.22■■■■□ 3.07
TDP1-205ENST00000553527 NEUROD1Q13562 356 aa34.19■■■■□ 3.06
TDP1-205ENST00000553527 SAFB2Q14151 953 aaKnown RBP eCLIP34.19■■■■□ 3.06
TDP1-205ENST00000553527 DDX17Q92841 729 aaKnown RBP34.19■■■■□ 3.06
TDP1-205ENST00000553527 PHF23Q9BUL5 403 aaPredicted RBP34.19■■■■□ 3.06
Retrieved 100 of 20,778 RNA–protein pairs in 61.3 ms