RNA–Protein interactions for RNA: ENST00000552125.1

TUBA1C-208, Transcript of tubulin alpha 1c, humanhuman

TSL 4

Gene TUBA1C, Length 575 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Exosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TUBA1C-208ENST00000552125 NAIPQ13075 1403 aa16.4■□□□□ 0.22
TUBA1C-208ENST00000552125 HFM1A2PYH4 1435 aa16.39■□□□□ 0.21
TUBA1C-208ENST00000552125 RIMS2Q9UQ26 1411 aa16.39■□□□□ 0.21
TUBA1C-208ENST00000552125 ABCF1Q8NE71 845 aaKnown RBP eCLIP16.39■□□□□ 0.21
TUBA1C-208ENST00000552125 SPHKAPQ2M3C7 1700 aa16.38■□□□□ 0.21
TUBA1C-208ENST00000552125 PIK3R4Q99570 1358 aa16.38■□□□□ 0.21
TUBA1C-208ENST00000552125 NCOA3Q9Y6Q9 1424 aa16.37■□□□□ 0.21
TUBA1C-208ENST00000552125 CHD2O14647 1828 aaKnown RBP16.37■□□□□ 0.21
TUBA1C-208ENST00000552125 TBX22Q9Y458 520 aa16.36■□□□□ 0.21
TUBA1C-208ENST00000552125 DISP3Q9P2K9 1392 aa16.36■□□□□ 0.21
TUBA1C-208ENST00000552125 TRPM2O94759 1503 aa16.35■□□□□ 0.21
TUBA1C-208ENST00000552125 FAM135BQ49AJ0 1406 aa16.34■□□□□ 0.21
TUBA1C-208ENST00000552125 HSPA1LP34931 641 aa16.33■□□□□ 0.2
TUBA1C-208ENST00000552125 ITGAEP38570 1179 aa16.33■□□□□ 0.2
TUBA1C-208ENST00000552125 TMEM94Q12767 1356 aa16.33■□□□□ 0.2
TUBA1C-208ENST00000552125 ADAMTS13Q76LX8 1427 aa16.33■□□□□ 0.2
TUBA1C-208ENST00000552125 SLC26A8Q96RN1 970 aa16.32■□□□□ 0.2
TUBA1C-208ENST00000552125 PIP4K2BP78356 416 aa16.31■□□□□ 0.2
TUBA1C-208ENST00000552125 PPARGC1BQ86YN6 1023 aaKnown RBP16.31■□□□□ 0.2
TUBA1C-208ENST00000552125 SETBP1Q9Y6X0 1596 aa16.3■□□□□ 0.2
TUBA1C-208ENST00000552125 ACIN1Q9UKV3 1341 aaKnown RBP16.29■□□□□ 0.2
TUBA1C-208ENST00000552125 PPP1R15AO75807 674 aaPredicted RBP16.29■□□□□ 0.2
TUBA1C-208ENST00000552125 CLTCL1P53675 1640 aa16.27■□□□□ 0.2
TUBA1C-208ENST00000552125 SCAF1Q9H7N4 1312 aaKnown RBP16.27■□□□□ 0.2
TUBA1C-208ENST00000552125 MED1Q15648 1581 aaPredicted RBP16.27■□□□□ 0.2
TUBA1C-208ENST00000552125 PROSER2Q86WR7 435 aaPredicted RBP16.27■□□□□ 0.2
TUBA1C-208ENST00000552125 NRXN3Q9Y4C0 1643 aa16.27■□□□□ 0.19
TUBA1C-208ENST00000552125 MSH6P52701 1360 aa16.26■□□□□ 0.19
TUBA1C-208ENST00000552125 KIF1BO60333 1816 aa16.25■□□□□ 0.19
TUBA1C-208ENST00000552125 NEXMIFQ5QGS0 1516 aa16.24■□□□□ 0.19
TUBA1C-208ENST00000552125 XRN1Q8IZH2 1706 aaKnown RBP16.24■□□□□ 0.19
TUBA1C-208ENST00000552125 CHGAP10645 457 aaKnown RBP16.23■□□□□ 0.19
TUBA1C-208ENST00000552125 ILDR2Q71H61 639 aa16.23■□□□□ 0.19
TUBA1C-208ENST00000552125 DCCP43146 1447 aa16.22■□□□□ 0.19
TUBA1C-208ENST00000552125 PRAG1Q86YV5 1406 aa16.22■□□□□ 0.19
TUBA1C-208ENST00000552125 ROBO1Q9Y6N7 1651 aa16.22■□□□□ 0.19
TUBA1C-208ENST00000552125 BCANQ96GW7 911 aa16.22■□□□□ 0.19
TUBA1C-208ENST00000552125 SOCS7O14512 581 aa16.21■□□□□ 0.19
TUBA1C-208ENST00000552125 RPGRIP1LQ68CZ1 1315 aa16.2■□□□□ 0.18
TUBA1C-208ENST00000552125 PTPRUQ92729 1446 aa16.19■□□□□ 0.18
TUBA1C-208ENST00000552125 C19orf44Q9H6X5 657 aa16.18■□□□□ 0.18
TUBA1C-208ENST00000552125 SLAIN2Q9P270 581 aa16.18■□□□□ 0.18
TUBA1C-208ENST00000552125 SIPA1L2Q9P2F8 1722 aaPredicted RBP16.17■□□□□ 0.18
TUBA1C-208ENST00000552125 CADPS2Q86UW7 1296 aa16.17■□□□□ 0.18
TUBA1C-208ENST00000552125 SLC4A1APQ9BWU0 796 aaKnown RBP16.17■□□□□ 0.18
TUBA1C-208ENST00000552125 AMOTL2Q9Y2J4 779 aa16.16■□□□□ 0.18
TUBA1C-208ENST00000552125 SETD1AO15047 1707 aaKnown RBP16.16■□□□□ 0.18
TUBA1C-208ENST00000552125 VGFO15240 615 aaPredicted RBP16.15■□□□□ 0.18
TUBA1C-208ENST00000552125 PPLO60437 1756 aa16.15■□□□□ 0.18
TUBA1C-208ENST00000552125 PTCH1Q13635 1447 aa16.14■□□□□ 0.17
TUBA1C-208ENST00000552125 ZNF326Q5BKZ1 582 aaKnown RBP16.14■□□□□ 0.17
TUBA1C-208ENST00000552125 NUTM2DQ5VT03 806 aaPredicted RBP16.14■□□□□ 0.17
TUBA1C-208ENST00000552125 TRIM52Q96A61 297 aa16.14■□□□□ 0.17
TUBA1C-208ENST00000552125 AHDC1Q5TGY3 1603 aaPredicted RBP16.14■□□□□ 0.17
TUBA1C-208ENST00000552125 METP08581 1390 aa16.13■□□□□ 0.17
TUBA1C-208ENST00000552125 COL16A1Q07092 1604 aaPredicted RBP16.12■□□□□ 0.17
TUBA1C-208ENST00000552125 SPATA31E1Q6ZUB1 1445 aa16.11■□□□□ 0.17
TUBA1C-208ENST00000552125 RBM33Q96EV2 1170 aaKnown RBP16.11■□□□□ 0.17
TUBA1C-208ENST00000552125 PHLPP1O60346 1717 aa16.11■□□□□ 0.17
TUBA1C-208ENST00000552125 CCDC144AA2RUR9 1427 aa16.11■□□□□ 0.17
TUBA1C-208ENST00000552125 ADGRL3Q9HAR2 1447 aa16.11■□□□□ 0.17
TUBA1C-208ENST00000552125 SETD5Q9C0A6 1442 aa16.1■□□□□ 0.17
TUBA1C-208ENST00000552125 IFT172Q9UG01 1749 aa16.09■□□□□ 0.17
TUBA1C-208ENST00000552125 ATF3P18847 181 aa16.09■□□□□ 0.17
TUBA1C-208ENST00000552125 MPHOSPH9Q99550 1183 aa16.09■□□□□ 0.17
TUBA1C-208ENST00000552125 ANKRD30BQ9BXX2 1392 aa16.09■□□□□ 0.17
TUBA1C-208ENST00000552125 JCADQ9P266 1359 aa16.09■□□□□ 0.17
TUBA1C-208ENST00000552125 MST1RQ04912 1400 aa16.07■□□□□ 0.16
TUBA1C-208ENST00000552125 SHPRHQ149N8 1683 aa16.06■□□□□ 0.16
TUBA1C-208ENST00000552125 C14orf37Q86TY3 774 aa16.06■□□□□ 0.16
TUBA1C-208ENST00000552125 PHF23Q9BUL5 403 aaPredicted RBP16.06■□□□□ 0.16
TUBA1C-208ENST00000552125 NALCNQ8IZF0 1738 aa16.05■□□□□ 0.16
TUBA1C-208ENST00000552125 LAMC1P11047 1609 aa16.05■□□□□ 0.16
TUBA1C-208ENST00000552125 TECPR2O15040 1411 aa16.05■□□□□ 0.16
TUBA1C-208ENST00000552125 HRCP23327 699 aa16.05■□□□□ 0.16
TUBA1C-208ENST00000552125 NHSL1Q5SYE7 1610 aa16.05■□□□□ 0.16
TUBA1C-208ENST00000552125 SPATA31A6Q5VVP1 1343 aa16.04■□□□□ 0.16
TUBA1C-208ENST00000552125 SENP3Q9H4L4 574 aaPredicted RBP16.04■□□□□ 0.16
TUBA1C-208ENST00000552125 ASXL1Q8IXJ9 1541 aa16.04■□□□□ 0.16
TUBA1C-208ENST00000552125 BRINP3Q76B58 766 aa16.03■□□□□ 0.16
TUBA1C-208ENST00000552125 RGS17Q9UGC6 210 aaPredicted RBP16.02■□□□□ 0.16
TUBA1C-208ENST00000552125 NRXN1Q9ULB1 1477 aa16.02■□□□□ 0.15
TUBA1C-208ENST00000552125 PIK3C2GO75747 1445 aa16.02■□□□□ 0.15
TUBA1C-208ENST00000552125 ROBO2Q9HCK4 1378 aa16.01■□□□□ 0.15
TUBA1C-208ENST00000552125 KNDC1Q76NI1 1749 aa16.01■□□□□ 0.15
TUBA1C-208ENST00000552125 MYOM2P54296 1465 aa16■□□□□ 0.15
TUBA1C-208ENST00000552125 CDC42BPGQ6DT37 1551 aa16■□□□□ 0.15
TUBA1C-208ENST00000552125 RAB3GAP2Q9H2M9 1393 aa16■□□□□ 0.15
TUBA1C-208ENST00000552125 FOXD1Q16676 465 aa15.99■□□□□ 0.15
TUBA1C-208ENST00000552125 ABCC11Q96J66 1382 aa15.99■□□□□ 0.15
TUBA1C-208ENST00000552125 C1orf167Q5SNV9 1468 aa15.98■□□□□ 0.15
TUBA1C-208ENST00000552125 LRPPRCP42704 1394 aaKnown RBP15.98■□□□□ 0.15
TUBA1C-208ENST00000552125 ADGRF5Q8IZF2 1346 aa15.97■□□□□ 0.15
TUBA1C-208ENST00000552125 SIRT1Q96EB6 747 aa15.97■□□□□ 0.15
TUBA1C-208ENST00000552125 LRP6O75581 1613 aa15.95■□□□□ 0.14
TUBA1C-208ENST00000552125 STAC3Q96MF2 364 aa15.95■□□□□ 0.14
TUBA1C-208ENST00000552125 LRRC59Q96AG4 307 aaKnown RBP15.94■□□□□ 0.14
TUBA1C-208ENST00000552125 C14orf93Q9H972 538 aaKnown RBP15.92■□□□□ 0.14
TUBA1C-208ENST00000552125 YTHDC2Q9H6S0 1430 aaKnown RBP15.92■□□□□ 0.14
TUBA1C-208ENST00000552125 SOS2Q07890 1332 aaPredicted RBP15.92■□□□□ 0.14
Retrieved 100 of 20,778 RNA–protein pairs in 197.7 ms