RNA–Protein interactions for RNA: ENST00000550828.1

ERBB3-215, Transcript of erb-b2 receptor tyrosine kinase 3, humanhuman

TSL 1 (best)

Gene ERBB3, Length 266 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERBB3-215ENST00000550828 CLSPNQ9HAW4 1339 aa19.72■□□□□ 0.75
ERBB3-215ENST00000550828 ARHGAP23Q9P227 1491 aa19.71■□□□□ 0.75
ERBB3-215ENST00000550828 SLIT1O75093 1534 aa19.71■□□□□ 0.75
ERBB3-215ENST00000550828 POLR1AO95602 1720 aaPredicted RBP19.7■□□□□ 0.74
ERBB3-215ENST00000550828 ZFYVE9O95405 1425 aa19.69■□□□□ 0.74
ERBB3-215ENST00000550828 CHGAP10645 457 aaKnown RBP19.68■□□□□ 0.74
ERBB3-215ENST00000550828 NEUROD1Q13562 356 aa19.68■□□□□ 0.74
ERBB3-215ENST00000550828 TMEM2Q9UHN6 1383 aa19.66■□□□□ 0.74
ERBB3-215ENST00000550828 RIMS2Q9UQ26 1411 aa19.65■□□□□ 0.74
ERBB3-215ENST00000550828 RGL3Q3MIN7 710 aa19.64■□□□□ 0.73
ERBB3-215ENST00000550828 STAG3Q9UJ98 1225 aa19.63■□□□□ 0.73
ERBB3-215ENST00000550828 NRXN3Q9Y4C0 1643 aa19.62■□□□□ 0.73
ERBB3-215ENST00000550828 IQGAP1P46940 1657 aa19.62■□□□□ 0.73
ERBB3-215ENST00000550828 THEMISQ8N1K5 641 aaPredicted RBP19.61■□□□□ 0.73
ERBB3-215ENST00000550828 MYOM2P54296 1465 aa19.6■□□□□ 0.73
ERBB3-215ENST00000550828 SETD1AO15047 1707 aaKnown RBP19.6■□□□□ 0.73
ERBB3-215ENST00000550828 LTKP29376 864 aa19.6■□□□□ 0.73
ERBB3-215ENST00000550828 ZNF326Q5BKZ1 582 aaKnown RBP19.6■□□□□ 0.73
ERBB3-215ENST00000550828 L3MBTL2Q969R5 705 aa19.6■□□□□ 0.73
ERBB3-215ENST00000550828 SCAF11Q99590 1463 aaKnown RBP19.59■□□□□ 0.73
ERBB3-215ENST00000550828 NRXN1Q9ULB1 1477 aa19.59■□□□□ 0.73
ERBB3-215ENST00000550828 NUTM2DQ5VT03 806 aaPredicted RBP19.58■□□□□ 0.72
ERBB3-215ENST00000550828 RPGRIP1LQ68CZ1 1315 aa19.56■□□□□ 0.72
ERBB3-215ENST00000550828 TONSLQ96HA7 1378 aa19.56■□□□□ 0.72
ERBB3-215ENST00000550828 ADGRF5Q8IZF2 1346 aa19.55■□□□□ 0.72
ERBB3-215ENST00000550828 SETBP1Q9Y6X0 1596 aa19.55■□□□□ 0.72
ERBB3-215ENST00000550828 MED14O60244 1454 aa19.54■□□□□ 0.72
ERBB3-215ENST00000550828 NCKAP5LQ9HCH0 1330 aa19.54■□□□□ 0.72
ERBB3-215ENST00000550828 DCAF11Q8TEB1 546 aa19.54■□□□□ 0.72
ERBB3-215ENST00000550828 PIK3C2GO75747 1445 aa19.53■□□□□ 0.72
ERBB3-215ENST00000550828 TXNDC2Q86VQ3 553 aa19.53■□□□□ 0.72
ERBB3-215ENST00000550828 PRAG1Q86YV5 1406 aa19.52■□□□□ 0.72
ERBB3-215ENST00000550828 TRPM1Q7Z4N2 1603 aa19.52■□□□□ 0.72
ERBB3-215ENST00000550828 KDM2AQ9Y2K7 1162 aa19.52■□□□□ 0.72
ERBB3-215ENST00000550828 PLEKHG1Q9ULL1 1385 aa19.52■□□□□ 0.72
ERBB3-215ENST00000550828 SENP3Q9H4L4 574 aaPredicted RBP19.51■□□□□ 0.71
ERBB3-215ENST00000550828 KIAA1210Q9ULL0 1709 aa19.51■□□□□ 0.71
ERBB3-215ENST00000550828 ASXL1Q8IXJ9 1541 aa19.51■□□□□ 0.71
ERBB3-215ENST00000550828 ADAMTS13Q76LX8 1427 aa19.51■□□□□ 0.71
ERBB3-215ENST00000550828 UBAP1LF5GYI3 381 aa19.5■□□□□ 0.71
ERBB3-215ENST00000550828 ANKLE2Q86XL3 938 aa19.5■□□□□ 0.71
ERBB3-215ENST00000550828 LAMC1P11047 1609 aa19.5■□□□□ 0.71
ERBB3-215ENST00000550828 ALKQ9UM73 1620 aa19.5■□□□□ 0.71
ERBB3-215ENST00000550828 NPHP4O75161 1426 aaPredicted RBP19.5■□□□□ 0.71
ERBB3-215ENST00000550828 ABCF1Q8NE71 845 aaKnown RBP eCLIP19.49■□□□□ 0.71
ERBB3-215ENST00000550828 NBPF8Q3BBV2 869 aa19.48■□□□□ 0.71
ERBB3-215ENST00000550828 EID1Q9Y6B2 187 aa19.48■□□□□ 0.71
ERBB3-215ENST00000550828 ZNF335Q9H4Z2 1342 aaPredicted RBP19.48■□□□□ 0.71
ERBB3-215ENST00000550828 VGFO15240 615 aaPredicted RBP19.47■□□□□ 0.71
ERBB3-215ENST00000550828 DIP2AQ14689 1571 aa19.46■□□□□ 0.71
ERBB3-215ENST00000550828 PPP1R15AO75807 674 aaPredicted RBP19.46■□□□□ 0.71
ERBB3-215ENST00000550828 TIMELESSQ9UNS1 1208 aa19.46■□□□□ 0.71
ERBB3-215ENST00000550828 STRCP1A6NGW2 1772 aa19.45■□□□□ 0.7
ERBB3-215ENST00000550828 ADGRB1O14514 1584 aa19.44■□□□□ 0.7
ERBB3-215ENST00000550828 CHD2O14647 1828 aaKnown RBP19.44■□□□□ 0.7
ERBB3-215ENST00000550828 HDGFP51858 240 aaKnown RBP19.43■□□□□ 0.7
ERBB3-215ENST00000550828 STAC3Q96MF2 364 aa19.42■□□□□ 0.7
ERBB3-215ENST00000550828 RALGAPBQ86X10 1494 aa19.41■□□□□ 0.7
ERBB3-215ENST00000550828 CFAP70Q5T0N1 1121 aa19.41■□□□□ 0.7
ERBB3-215ENST00000550828 SLC26A8Q96RN1 970 aa19.41■□□□□ 0.7
ERBB3-215ENST00000550828 XRN1Q8IZH2 1706 aaKnown RBP19.4■□□□□ 0.7
ERBB3-215ENST00000550828 METP08581 1390 aa19.4■□□□□ 0.7
ERBB3-215ENST00000550828 CPS1P31327 1500 aa19.4■□□□□ 0.7
ERBB3-215ENST00000550828 MED1Q15648 1581 aaPredicted RBP19.4■□□□□ 0.7
ERBB3-215ENST00000550828 C14orf93Q9H972 538 aaKnown RBP19.39■□□□□ 0.69
ERBB3-215ENST00000550828 PTPRUQ92729 1446 aa19.39■□□□□ 0.69
ERBB3-215ENST00000550828 KNDC1Q76NI1 1749 aa19.39■□□□□ 0.69
ERBB3-215ENST00000550828 NWD1Q149M9 1564 aa19.38■□□□□ 0.69
ERBB3-215ENST00000550828 NBPF1Q3BBV0 1214 aa19.37■□□□□ 0.69
ERBB3-215ENST00000550828 TBX22Q9Y458 520 aa19.36■□□□□ 0.69
ERBB3-215ENST00000550828 ARHGEF28Q8N1W1 1705 aaKnown RBP19.36■□□□□ 0.69
ERBB3-215ENST00000550828 BCANQ96GW7 911 aa19.35■□□□□ 0.69
ERBB3-215ENST00000550828 TMEM132EQ6IEE7 984 aa19.34■□□□□ 0.69
ERBB3-215ENST00000550828 GPRASP1Q5JY77 1395 aa19.33■□□□□ 0.69
ERBB3-215ENST00000550828 TOM1O60784 492 aa19.33■□□□□ 0.68
ERBB3-215ENST00000550828 XIRP1Q702N8 1843 aaKnown RBP19.32■□□□□ 0.68
ERBB3-215ENST00000550828 YTHDC2Q9H6S0 1430 aaKnown RBP19.31■□□□□ 0.68
ERBB3-215ENST00000550828 PIK3R4Q99570 1358 aa19.31■□□□□ 0.68
ERBB3-215ENST00000550828 ROCK2O75116 1388 aaKnown RBP19.3■□□□□ 0.68
ERBB3-215ENST00000550828 LRPPRCP42704 1394 aaKnown RBP19.3■□□□□ 0.68
ERBB3-215ENST00000550828 SCAF1Q9H7N4 1312 aaKnown RBP19.29■□□□□ 0.68
ERBB3-215ENST00000550828 HSPA1LP34931 641 aa19.29■□□□□ 0.68
ERBB3-215ENST00000550828 TECPR2O15040 1411 aa19.28■□□□□ 0.68
ERBB3-215ENST00000550828 DLC1Q96QB1 1528 aa19.27■□□□□ 0.68
ERBB3-215ENST00000550828 QRICH2Q9H0J4 1663 aa19.25■□□□□ 0.67
ERBB3-215ENST00000550828 ABCC11Q96J66 1382 aa19.25■□□□□ 0.67
ERBB3-215ENST00000550828 ROBO2Q9HCK4 1378 aa19.25■□□□□ 0.67
ERBB3-215ENST00000550828 PIP4K2BP78356 416 aa19.25■□□□□ 0.67
ERBB3-215ENST00000550828 NKTRP30414 1462 aaKnown RBP19.24■□□□□ 0.67
ERBB3-215ENST00000550828 KCNA6P17658 529 aa19.24■□□□□ 0.67
ERBB3-215ENST00000550828 ZEB1P37275 1124 aaPredicted RBP19.24■□□□□ 0.67
ERBB3-215ENST00000550828 STK26Q9P289 416 aa19.24■□□□□ 0.67
ERBB3-215ENST00000550828 AMOTL2Q9Y2J4 779 aa19.24■□□□□ 0.67
ERBB3-215ENST00000550828 NALCNQ8IZF0 1738 aa19.24■□□□□ 0.67
ERBB3-215ENST00000550828 SIPA1L2Q9P2F8 1722 aaPredicted RBP19.24■□□□□ 0.67
ERBB3-215ENST00000550828 PTCH1Q13635 1447 aa19.24■□□□□ 0.67
ERBB3-215ENST00000550828 PLEKHH1Q9ULM0 1364 aa19.22■□□□□ 0.67
ERBB3-215ENST00000550828 PHF23Q9BUL5 403 aaPredicted RBP19.22■□□□□ 0.67
ERBB3-215ENST00000550828 CARD11Q9BXL7 1154 aa19.21■□□□□ 0.67
ERBB3-215ENST00000550828 TRAK1Q9UPV9 953 aa19.21■□□□□ 0.67
Retrieved 100 of 20,778 RNA–protein pairs in 68.3 ms