RNA–Protein interactions for RNA: ENST00000550692.1

BRF1-218, Transcript of BRF1, RNA polymerase III transcription initiation factor subunit, humanhuman

TSL 4

Gene BRF1, Length 600 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRF1-218ENST00000550692 CPS1P31327 1500 aa16.8■□□□□ 0.28
BRF1-218ENST00000550692 SETD5Q9C0A6 1442 aa16.79■□□□□ 0.28
BRF1-218ENST00000550692 STRCP1A6NGW2 1772 aa16.79■□□□□ 0.28
BRF1-218ENST00000550692 HDGFP51858 240 aaKnown RBP16.79■□□□□ 0.28
BRF1-218ENST00000550692 SLC26A8Q96RN1 970 aa16.79■□□□□ 0.28
BRF1-218ENST00000550692 PPP1R15AO75807 674 aaPredicted RBP16.78■□□□□ 0.28
BRF1-218ENST00000550692 FOXD1Q16676 465 aa16.78■□□□□ 0.28
BRF1-218ENST00000550692 BCANQ96GW7 911 aa16.78■□□□□ 0.28
BRF1-218ENST00000550692 TRPM2O94759 1503 aa16.77■□□□□ 0.28
BRF1-218ENST00000550692 CLTCL1P53675 1640 aa16.77■□□□□ 0.27
BRF1-218ENST00000550692 ABCF1Q8NE71 845 aaKnown RBP eCLIP16.76■□□□□ 0.27
BRF1-218ENST00000550692 MPHOSPH9Q99550 1183 aa16.76■□□□□ 0.27
BRF1-218ENST00000550692 PLEKHG1Q9ULL1 1385 aa16.76■□□□□ 0.27
BRF1-218ENST00000550692 UBAP1LF5GYI3 381 aa16.75■□□□□ 0.27
BRF1-218ENST00000550692 RAB3GAP2Q9H2M9 1393 aa16.75■□□□□ 0.27
BRF1-218ENST00000550692 ZNF326Q5BKZ1 582 aaKnown RBP16.74■□□□□ 0.27
BRF1-218ENST00000550692 LRRC7Q96NW7 1537 aa16.74■□□□□ 0.27
BRF1-218ENST00000550692 KCNA6P17658 529 aa16.72■□□□□ 0.27
BRF1-218ENST00000550692 ACIN1Q9UKV3 1341 aaKnown RBP16.7■□□□□ 0.26
BRF1-218ENST00000550692 ADAMTS13Q76LX8 1427 aa16.7■□□□□ 0.26
BRF1-218ENST00000550692 KIF1BO60333 1816 aa16.7■□□□□ 0.26
BRF1-218ENST00000550692 TBX22Q9Y458 520 aa16.7■□□□□ 0.26
BRF1-218ENST00000550692 TRIM26Q12899 539 aaPredicted RBP16.68■□□□□ 0.26
BRF1-218ENST00000550692 SOCS7O14512 581 aa16.67■□□□□ 0.26
BRF1-218ENST00000550692 TOM1O60784 492 aa16.67■□□□□ 0.26
BRF1-218ENST00000550692 RBM33Q96EV2 1170 aaKnown RBP16.67■□□□□ 0.26
BRF1-218ENST00000550692 NEXMIFQ5QGS0 1516 aa16.66■□□□□ 0.26
BRF1-218ENST00000550692 PROSER2Q86WR7 435 aaPredicted RBP16.66■□□□□ 0.26
BRF1-218ENST00000550692 XIRP1Q702N8 1843 aaKnown RBP16.66■□□□□ 0.26
BRF1-218ENST00000550692 NWD1Q149M9 1564 aa16.65■□□□□ 0.26
BRF1-218ENST00000550692 CCDC144AA2RUR9 1427 aa16.65■□□□□ 0.26
BRF1-218ENST00000550692 PIP4K2BP78356 416 aa16.65■□□□□ 0.26
BRF1-218ENST00000550692 CHD2O14647 1828 aaKnown RBP16.65■□□□□ 0.26
BRF1-218ENST00000550692 SCAF1Q9H7N4 1312 aaKnown RBP16.65■□□□□ 0.26
BRF1-218ENST00000550692 TMEM94Q12767 1356 aa16.64■□□□□ 0.26
BRF1-218ENST00000550692 ALKQ9UM73 1620 aa16.64■□□□□ 0.25
BRF1-218ENST00000550692 HRCP23327 699 aa16.64■□□□□ 0.25
BRF1-218ENST00000550692 NRXN3Q9Y4C0 1643 aa16.63■□□□□ 0.25
BRF1-218ENST00000550692 DIP2AQ14689 1571 aa16.63■□□□□ 0.25
BRF1-218ENST00000550692 NKTRP30414 1462 aaKnown RBP16.62■□□□□ 0.25
BRF1-218ENST00000550692 RGL3Q3MIN7 710 aa16.62■□□□□ 0.25
BRF1-218ENST00000550692 SETBP1Q9Y6X0 1596 aa16.62■□□□□ 0.25
BRF1-218ENST00000550692 RPGRIP1LQ68CZ1 1315 aa16.62■□□□□ 0.25
BRF1-218ENST00000550692 VGFO15240 615 aaPredicted RBP16.61■□□□□ 0.25
BRF1-218ENST00000550692 HSPA1LP34931 641 aa16.61■□□□□ 0.25
BRF1-218ENST00000550692 PIK3R4Q99570 1358 aa16.61■□□□□ 0.25
BRF1-218ENST00000550692 SPATA31E1Q6ZUB1 1445 aa16.61■□□□□ 0.25
BRF1-218ENST00000550692 AMOTL2Q9Y2J4 779 aa16.6■□□□□ 0.25
BRF1-218ENST00000550692 PTPRUQ92729 1446 aa16.6■□□□□ 0.25
BRF1-218ENST00000550692 METP08581 1390 aa16.59■□□□□ 0.25
BRF1-218ENST00000550692 PPLO60437 1756 aa16.59■□□□□ 0.25
BRF1-218ENST00000550692 ANKRD30BQ9BXX2 1392 aa16.56■□□□□ 0.24
BRF1-218ENST00000550692 ADGRF5Q8IZF2 1346 aa16.55■□□□□ 0.24
BRF1-218ENST00000550692 MSH6P52701 1360 aa16.54■□□□□ 0.24
BRF1-218ENST00000550692 C14orf37Q86TY3 774 aa16.53■□□□□ 0.24
BRF1-218ENST00000550692 XRN1Q8IZH2 1706 aaKnown RBP16.53■□□□□ 0.24
BRF1-218ENST00000550692 SETD1AO15047 1707 aaKnown RBP16.52■□□□□ 0.24
BRF1-218ENST00000550692 NCOA3Q9Y6Q9 1424 aa16.52■□□□□ 0.23
BRF1-218ENST00000550692 IFT172Q9UG01 1749 aa16.51■□□□□ 0.23
BRF1-218ENST00000550692 C19orf44Q9H6X5 657 aa16.49■□□□□ 0.23
BRF1-218ENST00000550692 MED1Q15648 1581 aaPredicted RBP16.48■□□□□ 0.23
BRF1-218ENST00000550692 FAM135BQ49AJ0 1406 aa16.48■□□□□ 0.23
BRF1-218ENST00000550692 PCGF6Q9BYE7 350 aa16.48■□□□□ 0.23
BRF1-218ENST00000550692 SLAIN2Q9P270 581 aa16.48■□□□□ 0.23
BRF1-218ENST00000550692 SIPA1L2Q9P2F8 1722 aaPredicted RBP16.48■□□□□ 0.23
BRF1-218ENST00000550692 PIK3C2GO75747 1445 aa16.46■□□□□ 0.23
BRF1-218ENST00000550692 ATF3P18847 181 aa16.46■□□□□ 0.23
BRF1-218ENST00000550692 CADPS2Q86UW7 1296 aa16.46■□□□□ 0.23
BRF1-218ENST00000550692 ROBO2Q9HCK4 1378 aa16.45■□□□□ 0.22
BRF1-218ENST00000550692 ROBO1Q9Y6N7 1651 aa16.45■□□□□ 0.22
BRF1-218ENST00000550692 TMEM132EQ6IEE7 984 aa16.44■□□□□ 0.22
BRF1-218ENST00000550692 MYOM2P54296 1465 aa16.43■□□□□ 0.22
BRF1-218ENST00000550692 CFAP70Q5T0N1 1121 aa16.43■□□□□ 0.22
BRF1-218ENST00000550692 C14orf93Q9H972 538 aaKnown RBP16.43■□□□□ 0.22
BRF1-218ENST00000550692 PTCH1Q13635 1447 aa16.43■□□□□ 0.22
BRF1-218ENST00000550692 NRXN1Q9ULB1 1477 aa16.42■□□□□ 0.22
BRF1-218ENST00000550692 ASXL1Q8IXJ9 1541 aa16.42■□□□□ 0.22
BRF1-218ENST00000550692 DCAF11Q8TEB1 546 aa16.42■□□□□ 0.22
BRF1-218ENST00000550692 STK26Q9P289 416 aa16.42■□□□□ 0.22
BRF1-218ENST00000550692 KDM2AQ9Y2K7 1162 aa16.42■□□□□ 0.22
BRF1-218ENST00000550692 PRAG1Q86YV5 1406 aa16.42■□□□□ 0.22
BRF1-218ENST00000550692 ADGRL3Q9HAR2 1447 aa16.42■□□□□ 0.22
BRF1-218ENST00000550692 DHX57Q6P158 1386 aaKnown RBP16.4■□□□□ 0.22
BRF1-218ENST00000550692 DCCP43146 1447 aa16.4■□□□□ 0.22
BRF1-218ENST00000550692 LRPPRCP42704 1394 aaKnown RBP16.39■□□□□ 0.21
BRF1-218ENST00000550692 NALCNQ8IZF0 1738 aa16.39■□□□□ 0.21
BRF1-218ENST00000550692 ABCC11Q96J66 1382 aa16.38■□□□□ 0.21
BRF1-218ENST00000550692 WAPLQ7Z5K2 1190 aa16.38■□□□□ 0.21
BRF1-218ENST00000550692 TECPR2O15040 1411 aa16.37■□□□□ 0.21
BRF1-218ENST00000550692 MST1RQ04912 1400 aa16.37■□□□□ 0.21
BRF1-218ENST00000550692 YTHDC2Q9H6S0 1430 aaKnown RBP16.37■□□□□ 0.21
BRF1-218ENST00000550692 BRINP3Q76B58 766 aa16.36■□□□□ 0.21
BRF1-218ENST00000550692 PHF23Q9BUL5 403 aaPredicted RBP16.36■□□□□ 0.21
BRF1-218ENST00000550692 PLEKHH1Q9ULM0 1364 aa16.36■□□□□ 0.21
BRF1-218ENST00000550692 STAC3Q96MF2 364 aa16.35■□□□□ 0.21
BRF1-218ENST00000550692 LAMC1P11047 1609 aa16.34■□□□□ 0.21
BRF1-218ENST00000550692 KNDC1Q76NI1 1749 aa16.34■□□□□ 0.21
BRF1-218ENST00000550692 SIN3AQ96ST3 1273 aa16.34■□□□□ 0.21
BRF1-218ENST00000550692 PHLPP1O60346 1717 aa16.33■□□□□ 0.21
BRF1-218ENST00000550692 C1orf167Q5SNV9 1468 aa16.32■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 12.8 ms