RNA–Protein interactions for RNA: ENST00000547764.1

PRPF40B-206, Transcript of pre-mRNA processing factor 40 homolog B, humanhuman

TSL 3

Gene PRPF40B, Length 803 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF40B-206ENST00000547764 HDGFP51858 240 aaKnown RBP27.82■■■□□ 2.04
PRPF40B-206ENST00000547764 ILDR1Q86SU0 546 aaPredicted RBP27.8■■■□□ 2.04
PRPF40B-206ENST00000547764 PPP1R15AO75807 674 aaPredicted RBP27.78■■■□□ 2.04
PRPF40B-206ENST00000547764 HRCP23327 699 aa27.78■■■□□ 2.04
PRPF40B-206ENST00000547764 ABCF1Q8NE71 845 aaKnown RBP eCLIP27.78■■■□□ 2.04
PRPF40B-206ENST00000547764 FBXO41Q8TF61 875 aa27.78■■■□□ 2.04
PRPF40B-206ENST00000547764 NUTM2DQ5VT03 806 aaPredicted RBP27.77■■■□□ 2.04
PRPF40B-206ENST00000547764 ZNF326Q5BKZ1 582 aaKnown RBP27.75■■■□□ 2.03
PRPF40B-206ENST00000547764 BCANQ96GW7 911 aa27.75■■■□□ 2.03
PRPF40B-206ENST00000547764 SLC26A8Q96RN1 970 aa27.75■■■□□ 2.03
PRPF40B-206ENST00000547764 SENP3Q9H4L4 574 aaPredicted RBP27.75■■■□□ 2.03
PRPF40B-206ENST00000547764 PLEKHG1Q9ULL1 1385 aa27.74■■■□□ 2.03
PRPF40B-206ENST00000547764 CPS1P31327 1500 aa27.72■■■□□ 2.03
PRPF40B-206ENST00000547764 KIF1BO60333 1816 aa27.71■■■□□ 2.03
PRPF40B-206ENST00000547764 IQSEC2Q5JU85 1478 aa27.7■■■□□ 2.03
PRPF40B-206ENST00000547764 STRCP1A6NGW2 1772 aa27.68■■■□□ 2.02
PRPF40B-206ENST00000547764 CCDC144AA2RUR9 1427 aa27.68■■■□□ 2.02
PRPF40B-206ENST00000547764 NEXMIFQ5QGS0 1516 aa27.64■■■□□ 2.02
PRPF40B-206ENST00000547764 TBX22Q9Y458 520 aa27.63■■■□□ 2.01
PRPF40B-206ENST00000547764 ADAMTS13Q76LX8 1427 aa27.63■■■□□ 2.01
PRPF40B-206ENST00000547764 KCNA6P17658 529 aa27.62■■■□□ 2.01
PRPF40B-206ENST00000547764 LRRC7Q96NW7 1537 aa27.6■■■□□ 2.01
PRPF40B-206ENST00000547764 RPGRIP1LQ68CZ1 1315 aa27.6■■■□□ 2.01
PRPF40B-206ENST00000547764 SPATA31E1Q6ZUB1 1445 aa27.58■■■□□ 2
PRPF40B-206ENST00000547764 RGL3Q3MIN7 710 aa27.57■■■□□ 2
PRPF40B-206ENST00000547764 ANKRD30BQ9BXX2 1392 aa27.57■■■□□ 2
PRPF40B-206ENST00000547764 VGFO15240 615 aaPredicted RBP27.56■■■□□ 2
PRPF40B-206ENST00000547764 DIP2AQ14689 1571 aa27.56■■■□□ 2
PRPF40B-206ENST00000547764 TRIM26Q12899 539 aaPredicted RBP27.55■■■□□ 2
PRPF40B-206ENST00000547764 SETBP1Q9Y6X0 1596 aa27.55■■■□□ 2
PRPF40B-206ENST00000547764 UBAP1LF5GYI3 381 aa27.54■■■□□ 2
PRPF40B-206ENST00000547764 NRXN3Q9Y4C0 1643 aa27.54■■■□□ 2
PRPF40B-206ENST00000547764 NWD1Q149M9 1564 aa27.53■■■□□ 2
PRPF40B-206ENST00000547764 CHD2O14647 1828 aaKnown RBP27.52■■■□□ 2
PRPF40B-206ENST00000547764 PIK3R4Q99570 1358 aa27.51■■□□□ 1.99
PRPF40B-206ENST00000547764 PPLO60437 1756 aa27.51■■□□□ 1.99
PRPF40B-206ENST00000547764 PROSER2Q86WR7 435 aaPredicted RBP27.5■■□□□ 1.99
PRPF40B-206ENST00000547764 NKTRP30414 1462 aaKnown RBP27.49■■□□□ 1.99
PRPF40B-206ENST00000547764 TMEM94Q12767 1356 aa27.48■■□□□ 1.99
PRPF40B-206ENST00000547764 RBM33Q96EV2 1170 aaKnown RBP27.47■■□□□ 1.99
PRPF40B-206ENST00000547764 TOM1O60784 492 aa27.46■■□□□ 1.99
PRPF40B-206ENST00000547764 PTPRUQ92729 1446 aa27.46■■□□□ 1.99
PRPF40B-206ENST00000547764 METP08581 1390 aa27.46■■□□□ 1.99
PRPF40B-206ENST00000547764 XIRP1Q702N8 1843 aaKnown RBP27.46■■□□□ 1.99
PRPF40B-206ENST00000547764 AMOTL2Q9Y2J4 779 aa27.45■■□□□ 1.98
PRPF40B-206ENST00000547764 ADGRF5Q8IZF2 1346 aa27.44■■□□□ 1.98
PRPF40B-206ENST00000547764 IFT172Q9UG01 1749 aa27.42■■□□□ 1.98
PRPF40B-206ENST00000547764 ALKQ9UM73 1620 aa27.4■■□□□ 1.98
PRPF40B-206ENST00000547764 PIP4K2BP78356 416 aa27.39■■□□□ 1.98
PRPF40B-206ENST00000547764 SETD1AO15047 1707 aaKnown RBP27.37■■□□□ 1.97
PRPF40B-206ENST00000547764 SCAF1Q9H7N4 1312 aaKnown RBP27.37■■□□□ 1.97
PRPF40B-206ENST00000547764 XRN1Q8IZH2 1706 aaKnown RBP27.36■■□□□ 1.97
PRPF40B-206ENST00000547764 PIK3C2GO75747 1445 aa27.33■■□□□ 1.97
PRPF40B-206ENST00000547764 NCOA3Q9Y6Q9 1424 aa27.33■■□□□ 1.97
PRPF40B-206ENST00000547764 MYOM2P54296 1465 aa27.32■■□□□ 1.96
PRPF40B-206ENST00000547764 MSH6P52701 1360 aa27.32■■□□□ 1.96
PRPF40B-206ENST00000547764 NRXN1Q9ULB1 1477 aa27.31■■□□□ 1.96
PRPF40B-206ENST00000547764 C14orf37Q86TY3 774 aa27.3■■□□□ 1.96
PRPF40B-206ENST00000547764 DCAF11Q8TEB1 546 aa27.29■■□□□ 1.96
PRPF40B-206ENST00000547764 DHX57Q6P158 1386 aaKnown RBP27.27■■□□□ 1.96
PRPF40B-206ENST00000547764 KDM2AQ9Y2K7 1162 aa27.27■■□□□ 1.96
PRPF40B-206ENST00000547764 C19orf44Q9H6X5 657 aa27.26■■□□□ 1.95
PRPF40B-206ENST00000547764 C14orf93Q9H972 538 aaKnown RBP27.26■■□□□ 1.95
PRPF40B-206ENST00000547764 CFAP70Q5T0N1 1121 aa27.24■■□□□ 1.95
PRPF40B-206ENST00000547764 TMEM132EQ6IEE7 984 aa27.24■■□□□ 1.95
PRPF40B-206ENST00000547764 ROBO2Q9HCK4 1378 aa27.23■■□□□ 1.95
PRPF40B-206ENST00000547764 STAC3Q96MF2 364 aa27.23■■□□□ 1.95
PRPF40B-206ENST00000547764 PTCH1Q13635 1447 aa27.23■■□□□ 1.95
PRPF40B-206ENST00000547764 PRAG1Q86YV5 1406 aa27.23■■□□□ 1.95
PRPF40B-206ENST00000547764 ASXL1Q8IXJ9 1541 aa27.22■■□□□ 1.95
PRPF40B-206ENST00000547764 HSPA1LP34931 641 aa27.21■■□□□ 1.95
PRPF40B-206ENST00000547764 SIPA1L2Q9P2F8 1722 aaPredicted RBP27.21■■□□□ 1.95
PRPF40B-206ENST00000547764 SIN3AQ96ST3 1273 aa27.2■■□□□ 1.94
PRPF40B-206ENST00000547764 SLAIN2Q9P270 581 aa27.2■■□□□ 1.94
PRPF40B-206ENST00000547764 STK26Q9P289 416 aa27.2■■□□□ 1.94
PRPF40B-206ENST00000547764 LRPPRCP42704 1394 aaKnown RBP27.2■■□□□ 1.94
PRPF40B-206ENST00000547764 ATF3P18847 181 aa27.19■■□□□ 1.94
PRPF40B-206ENST00000547764 CADPS2Q86UW7 1296 aa27.19■■□□□ 1.94
PRPF40B-206ENST00000547764 FAM135BQ49AJ0 1406 aa27.18■■□□□ 1.94
PRPF40B-206ENST00000547764 LAMC1P11047 1609 aa27.17■■□□□ 1.94
PRPF40B-206ENST00000547764 ABCC11Q96J66 1382 aa27.17■■□□□ 1.94
PRPF40B-206ENST00000547764 YTHDC2Q9H6S0 1430 aaKnown RBP27.16■■□□□ 1.94
PRPF40B-206ENST00000547764 ADGRL3Q9HAR2 1447 aa27.16■■□□□ 1.94
PRPF40B-206ENST00000547764 TECPR2O15040 1411 aa27.16■■□□□ 1.94
PRPF40B-206ENST00000547764 DCCP43146 1447 aa27.15■■□□□ 1.94
PRPF40B-206ENST00000547764 NEUROD1Q13562 356 aa27.14■■□□□ 1.94
PRPF40B-206ENST00000547764 PCGF6Q9BYE7 350 aa27.13■■□□□ 1.93
PRPF40B-206ENST00000547764 NALCNQ8IZF0 1738 aa27.12■■□□□ 1.93
PRPF40B-206ENST00000547764 ROBO1Q9Y6N7 1651 aa27.11■■□□□ 1.93
PRPF40B-206ENST00000547764 WAPLQ7Z5K2 1190 aa27.11■■□□□ 1.93
PRPF40B-206ENST00000547764 KNDC1Q76NI1 1749 aa27.1■■□□□ 1.93
PRPF40B-206ENST00000547764 L3MBTL2Q969R5 705 aa27.09■■□□□ 1.93
PRPF40B-206ENST00000547764 ADGRB1O14514 1584 aa27.09■■□□□ 1.93
PRPF40B-206ENST00000547764 SIRT1Q96EB6 747 aa27.08■■□□□ 1.93
PRPF40B-206ENST00000547764 PLEKHH1Q9ULM0 1364 aa27.08■■□□□ 1.93
PRPF40B-206ENST00000547764 MST1RQ04912 1400 aa27.06■■□□□ 1.92
PRPF40B-206ENST00000547764 TRAK1Q9UPV9 953 aa27.02■■□□□ 1.92
PRPF40B-206ENST00000547764 BRINP3Q76B58 766 aa27.01■■□□□ 1.91
PRPF40B-206ENST00000547764 PRAM1Q96QH2 718 aa27.01■■□□□ 1.91
PRPF40B-206ENST00000547764 DLC1Q96QB1 1528 aa27■■□□□ 1.91
Retrieved 100 of 20,778 RNA–protein pairs in 46.9 ms