RNA–Protein interactions for RNA: ENST00000547427.5

RBFOX1-209, Transcript of RNA binding fox-1 homolog 1, humanhuman

TSL 4

Gene RBFOX1, Length 557 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RBFOX1-209ENST00000547427 MPHOSPH9Q99550 1183 aa35.75■■■■□ 3.31
RBFOX1-209ENST00000547427 BCANQ96GW7 911 aa35.74■■■■□ 3.31
RBFOX1-209ENST00000547427 CLTCL1P53675 1640 aa35.74■■■■□ 3.31
RBFOX1-209ENST00000547427 KIF1BO60333 1816 aa35.71■■■■□ 3.31
RBFOX1-209ENST00000547427 FOXD1Q16676 465 aa35.71■■■■□ 3.31
RBFOX1-209ENST00000547427 ABCF1Q8NE71 845 aaKnown RBP eCLIP35.71■■■■□ 3.31
RBFOX1-209ENST00000547427 ZFYVE9O95405 1425 aa35.71■■■■□ 3.31
RBFOX1-209ENST00000547427 ZNF326Q5BKZ1 582 aaKnown RBP35.69■■■■□ 3.3
RBFOX1-209ENST00000547427 SENP3Q9H4L4 574 aaPredicted RBP35.67■■■■□ 3.3
RBFOX1-209ENST00000547427 NUTM2DQ5VT03 806 aaPredicted RBP35.66■■■■□ 3.3
RBFOX1-209ENST00000547427 CPS1P31327 1500 aa35.66■■■■□ 3.3
RBFOX1-209ENST00000547427 IQSEC2Q5JU85 1478 aa35.63■■■■□ 3.29
RBFOX1-209ENST00000547427 SLC26A8Q96RN1 970 aa35.63■■■■□ 3.29
RBFOX1-209ENST00000547427 PLEKHG1Q9ULL1 1385 aa35.63■■■■□ 3.29
RBFOX1-209ENST00000547427 STRCP1A6NGW2 1772 aa35.59■■■■□ 3.29
RBFOX1-209ENST00000547427 HRCP23327 699 aa35.57■■■■□ 3.28
RBFOX1-209ENST00000547427 CCDC144AA2RUR9 1427 aa35.57■■■■□ 3.28
RBFOX1-209ENST00000547427 NEXMIFQ5QGS0 1516 aa35.48■■■■□ 3.27
RBFOX1-209ENST00000547427 KCNA6P17658 529 aa35.46■■■■□ 3.27
RBFOX1-209ENST00000547427 TBX22Q9Y458 520 aa35.46■■■■□ 3.27
RBFOX1-209ENST00000547427 LRRC7Q96NW7 1537 aa35.45■■■■□ 3.27
RBFOX1-209ENST00000547427 DIP2AQ14689 1571 aa35.44■■■■□ 3.26
RBFOX1-209ENST00000547427 UBAP1LF5GYI3 381 aa35.44■■■■□ 3.26
RBFOX1-209ENST00000547427 RPGRIP1LQ68CZ1 1315 aa35.43■■■■□ 3.26
RBFOX1-209ENST00000547427 ADAMTS13Q76LX8 1427 aa35.42■■■■□ 3.26
RBFOX1-209ENST00000547427 CHD2O14647 1828 aaKnown RBP35.41■■■■□ 3.26
RBFOX1-209ENST00000547427 VGFO15240 615 aaPredicted RBP35.4■■■■□ 3.26
RBFOX1-209ENST00000547427 RGL3Q3MIN7 710 aa35.4■■■■□ 3.26
RBFOX1-209ENST00000547427 PPLO60437 1756 aa35.38■■■■□ 3.25
RBFOX1-209ENST00000547427 NWD1Q149M9 1564 aa35.38■■■■□ 3.25
RBFOX1-209ENST00000547427 SETBP1Q9Y6X0 1596 aa35.38■■■■□ 3.25
RBFOX1-209ENST00000547427 PROSER2Q86WR7 435 aaPredicted RBP35.36■■■■□ 3.25
RBFOX1-209ENST00000547427 NRXN3Q9Y4C0 1643 aa35.35■■■■□ 3.25
RBFOX1-209ENST00000547427 TOM1O60784 492 aa35.34■■■■□ 3.25
RBFOX1-209ENST00000547427 NKTRP30414 1462 aaKnown RBP35.34■■■■□ 3.25
RBFOX1-209ENST00000547427 SPATA31E1Q6ZUB1 1445 aa35.33■■■■□ 3.25
RBFOX1-209ENST00000547427 XIRP1Q702N8 1843 aaKnown RBP35.33■■■■□ 3.25
RBFOX1-209ENST00000547427 PIK3R4Q99570 1358 aa35.33■■■■□ 3.25
RBFOX1-209ENST00000547427 ANKRD30BQ9BXX2 1392 aa35.3■■■■□ 3.24
RBFOX1-209ENST00000547427 TRIM26Q12899 539 aaPredicted RBP35.3■■■■□ 3.24
RBFOX1-209ENST00000547427 TMEM94Q12767 1356 aa35.29■■■■□ 3.24
RBFOX1-209ENST00000547427 SCAF1Q9H7N4 1312 aaKnown RBP35.29■■■■□ 3.24
RBFOX1-209ENST00000547427 RBM33Q96EV2 1170 aaKnown RBP35.26■■■■□ 3.24
RBFOX1-209ENST00000547427 IFT172Q9UG01 1749 aa35.26■■■■□ 3.23
RBFOX1-209ENST00000547427 PIP4K2BP78356 416 aa35.25■■■■□ 3.23
RBFOX1-209ENST00000547427 AMOTL2Q9Y2J4 779 aa35.25■■■■□ 3.23
RBFOX1-209ENST00000547427 METP08581 1390 aa35.21■■■■□ 3.23
RBFOX1-209ENST00000547427 PTPRUQ92729 1446 aa35.21■■■■□ 3.23
RBFOX1-209ENST00000547427 ADGRF5Q8IZF2 1346 aa35.19■■■■□ 3.22
RBFOX1-209ENST00000547427 ALKQ9UM73 1620 aa35.19■■■■□ 3.22
RBFOX1-209ENST00000547427 C14orf37Q86TY3 774 aa35.17■■■■□ 3.22
RBFOX1-209ENST00000547427 SETD1AO15047 1707 aaKnown RBP35.15■■■■□ 3.22
RBFOX1-209ENST00000547427 XRN1Q8IZH2 1706 aaKnown RBP35.15■■■■□ 3.22
RBFOX1-209ENST00000547427 MSH6P52701 1360 aa35.14■■■■□ 3.22
RBFOX1-209ENST00000547427 NCOA3Q9Y6Q9 1424 aa35.1■■■■□ 3.21
RBFOX1-209ENST00000547427 PIK3C2GO75747 1445 aa35.06■■■■□ 3.2
RBFOX1-209ENST00000547427 MYOM2P54296 1465 aa35.06■■■■□ 3.2
RBFOX1-209ENST00000547427 DCAF11Q8TEB1 546 aa35.03■■■■□ 3.2
RBFOX1-209ENST00000547427 KDM2AQ9Y2K7 1162 aa35.03■■■■□ 3.2
RBFOX1-209ENST00000547427 C19orf44Q9H6X5 657 aa35.02■■■■□ 3.2
RBFOX1-209ENST00000547427 SIPA1L2Q9P2F8 1722 aaPredicted RBP35.01■■■■□ 3.19
RBFOX1-209ENST00000547427 NRXN1Q9ULB1 1477 aa34.99■■■■□ 3.19
RBFOX1-209ENST00000547427 ATF3P18847 181 aa34.98■■■■□ 3.19
RBFOX1-209ENST00000547427 LAMC1P11047 1609 aa34.97■■■■□ 3.19
RBFOX1-209ENST00000547427 HSPA1LP34931 641 aa34.97■■■■□ 3.19
RBFOX1-209ENST00000547427 PTCH1Q13635 1447 aa34.96■■■■□ 3.19
RBFOX1-209ENST00000547427 TMEM132EQ6IEE7 984 aa34.95■■■■□ 3.19
RBFOX1-209ENST00000547427 CADPS2Q86UW7 1296 aa34.95■■■■□ 3.19
RBFOX1-209ENST00000547427 STAC3Q96MF2 364 aa34.95■■■■□ 3.19
RBFOX1-209ENST00000547427 C14orf93Q9H972 538 aaKnown RBP34.95■■■■□ 3.19
RBFOX1-209ENST00000547427 SLAIN2Q9P270 581 aa34.95■■■■□ 3.19
RBFOX1-209ENST00000547427 STK26Q9P289 416 aa34.95■■■■□ 3.19
RBFOX1-209ENST00000547427 ROBO2Q9HCK4 1378 aa34.93■■■■□ 3.18
RBFOX1-209ENST00000547427 CFAP70Q5T0N1 1121 aa34.93■■■■□ 3.18
RBFOX1-209ENST00000547427 DHX57Q6P158 1386 aaKnown RBP34.92■■■■□ 3.18
RBFOX1-209ENST00000547427 FAM135BQ49AJ0 1406 aa34.91■■■■□ 3.18
RBFOX1-209ENST00000547427 ROBO1Q9Y6N7 1651 aa34.91■■■■□ 3.18
RBFOX1-209ENST00000547427 ASXL1Q8IXJ9 1541 aa34.9■■■■□ 3.18
RBFOX1-209ENST00000547427 PRAG1Q86YV5 1406 aa34.89■■■■□ 3.18
RBFOX1-209ENST00000547427 LRPPRCP42704 1394 aaKnown RBP34.89■■■■□ 3.18
RBFOX1-209ENST00000547427 NALCNQ8IZF0 1738 aa34.89■■■■□ 3.18
RBFOX1-209ENST00000547427 ADGRL3Q9HAR2 1447 aa34.89■■■■□ 3.18
RBFOX1-209ENST00000547427 DCCP43146 1447 aa34.88■■■■□ 3.17
RBFOX1-209ENST00000547427 YTHDC2Q9H6S0 1430 aaKnown RBP34.87■■■■□ 3.17
RBFOX1-209ENST00000547427 KNDC1Q76NI1 1749 aa34.86■■■■□ 3.17
RBFOX1-209ENST00000547427 NEUROD1Q13562 356 aa34.84■■■■□ 3.17
RBFOX1-209ENST00000547427 SIN3AQ96ST3 1273 aa34.84■■■■□ 3.17
RBFOX1-209ENST00000547427 ABCC11Q96J66 1382 aa34.84■■■■□ 3.17
RBFOX1-209ENST00000547427 TECPR2O15040 1411 aa34.82■■■■□ 3.17
RBFOX1-209ENST00000547427 WAPLQ7Z5K2 1190 aa34.78■■■■□ 3.16
RBFOX1-209ENST00000547427 PCGF6Q9BYE7 350 aa34.75■■■■□ 3.15
RBFOX1-209ENST00000547427 MST1RQ04912 1400 aa34.73■■■■□ 3.15
RBFOX1-209ENST00000547427 ADGRB1O14514 1584 aa34.73■■■■□ 3.15
RBFOX1-209ENST00000547427 PHLPP1O60346 1717 aa34.72■■■■□ 3.15
RBFOX1-209ENST00000547427 L3MBTL2Q969R5 705 aa34.72■■■■□ 3.15
RBFOX1-209ENST00000547427 SIRT1Q96EB6 747 aa34.71■■■■□ 3.15
RBFOX1-209ENST00000547427 PLEKHH1Q9ULM0 1364 aa34.71■■■■□ 3.15
RBFOX1-209ENST00000547427 TRAK1Q9UPV9 953 aa34.69■■■■□ 3.14
RBFOX1-209ENST00000547427 BRINP3Q76B58 766 aa34.68■■■■□ 3.14
RBFOX1-209ENST00000547427 POGKQ9P215 609 aa34.68■■■■□ 3.14
Retrieved 100 of 20,778 RNA–protein pairs in 26.6 ms