RNA–Protein interactions for RNA: ENST00000547338.5

RBFOX1-207, Transcript of RNA binding fox-1 homolog 1, humanhuman

TSL 2 BASIC

Gene RBFOX1, Length 1,513 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RBFOX1-207ENST00000547338 CLTCL1P53675 1640 aa25.31■■□□□ 1.64
RBFOX1-207ENST00000547338 RIMS2Q9UQ26 1411 aa25.31■■□□□ 1.64
RBFOX1-207ENST00000547338 TRPM2O94759 1503 aa25.3■■□□□ 1.64
RBFOX1-207ENST00000547338 TRIM52Q96A61 297 aa25.28■■□□□ 1.64
RBFOX1-207ENST00000547338 LRRC7Q96NW7 1537 aa25.24■■□□□ 1.63
RBFOX1-207ENST00000547338 CHGAP10645 457 aaKnown RBP25.24■■□□□ 1.63
RBFOX1-207ENST00000547338 PLEKHG1Q9ULL1 1385 aa25.23■■□□□ 1.63
RBFOX1-207ENST00000547338 SETD5Q9C0A6 1442 aa25.22■■□□□ 1.63
RBFOX1-207ENST00000547338 SLC4A1APQ9BWU0 796 aaKnown RBP25.22■■□□□ 1.63
RBFOX1-207ENST00000547338 SLC26A8Q96RN1 970 aa25.22■■□□□ 1.63
RBFOX1-207ENST00000547338 ALKQ9UM73 1620 aa25.21■■□□□ 1.63
RBFOX1-207ENST00000547338 XIRP1Q702N8 1843 aaKnown RBP25.19■■□□□ 1.62
RBFOX1-207ENST00000547338 FOXD1Q16676 465 aa25.19■■□□□ 1.62
RBFOX1-207ENST00000547338 NUTM2DQ5VT03 806 aaPredicted RBP25.19■■□□□ 1.62
RBFOX1-207ENST00000547338 SENP3Q9H4L4 574 aaPredicted RBP25.19■■□□□ 1.62
RBFOX1-207ENST00000547338 ADAMTS13Q76LX8 1427 aa25.18■■□□□ 1.62
RBFOX1-207ENST00000547338 NWD1Q149M9 1564 aa25.18■■□□□ 1.62
RBFOX1-207ENST00000547338 RAB3GAP2Q9H2M9 1393 aa25.17■■□□□ 1.62
RBFOX1-207ENST00000547338 NRXN3Q9Y4C0 1643 aa25.15■■□□□ 1.62
RBFOX1-207ENST00000547338 NEXMIFQ5QGS0 1516 aa25.15■■□□□ 1.62
RBFOX1-207ENST00000547338 ABCF1Q8NE71 845 aaKnown RBP eCLIP25.15■■□□□ 1.62
RBFOX1-207ENST00000547338 KIF1BO60333 1816 aa25.15■■□□□ 1.62
RBFOX1-207ENST00000547338 UBAP1LF5GYI3 381 aa25.14■■□□□ 1.62
RBFOX1-207ENST00000547338 PPP1R15AO75807 674 aaPredicted RBP25.14■■□□□ 1.62
RBFOX1-207ENST00000547338 MPHOSPH9Q99550 1183 aa25.14■■□□□ 1.62
RBFOX1-207ENST00000547338 CHD2O14647 1828 aaKnown RBP25.12■■□□□ 1.61
RBFOX1-207ENST00000547338 KCNA6P17658 529 aa25.12■■□□□ 1.61
RBFOX1-207ENST00000547338 HDGFP51858 240 aaKnown RBP25.12■■□□□ 1.61
RBFOX1-207ENST00000547338 DIP2AQ14689 1571 aa25.1■■□□□ 1.61
RBFOX1-207ENST00000547338 SETBP1Q9Y6X0 1596 aa25.1■■□□□ 1.61
RBFOX1-207ENST00000547338 TBX22Q9Y458 520 aa25.09■■□□□ 1.61
RBFOX1-207ENST00000547338 BCANQ96GW7 911 aa25.08■■□□□ 1.61
RBFOX1-207ENST00000547338 NKTRP30414 1462 aaKnown RBP25.08■■□□□ 1.61
RBFOX1-207ENST00000547338 ZNF326Q5BKZ1 582 aaKnown RBP25.07■■□□□ 1.6
RBFOX1-207ENST00000547338 DHX57Q6P158 1386 aaKnown RBP25.06■■□□□ 1.6
RBFOX1-207ENST00000547338 TMEM94Q12767 1356 aa25.05■■□□□ 1.6
RBFOX1-207ENST00000547338 PTPRUQ92729 1446 aa25.04■■□□□ 1.6
RBFOX1-207ENST00000547338 SPATA31E1Q6ZUB1 1445 aa25.03■■□□□ 1.6
RBFOX1-207ENST00000547338 PPLO60437 1756 aa25.03■■□□□ 1.6
RBFOX1-207ENST00000547338 RBM33Q96EV2 1170 aaKnown RBP25.02■■□□□ 1.6
RBFOX1-207ENST00000547338 CCDC144AA2RUR9 1427 aa25.02■■□□□ 1.6
RBFOX1-207ENST00000547338 ACIN1Q9UKV3 1341 aaKnown RBP25.01■■□□□ 1.59
RBFOX1-207ENST00000547338 TOM1O60784 492 aa25.01■■□□□ 1.59
RBFOX1-207ENST00000547338 PIK3R4Q99570 1358 aa25■■□□□ 1.59
RBFOX1-207ENST00000547338 SETD1AO15047 1707 aaKnown RBP24.98■■□□□ 1.59
RBFOX1-207ENST00000547338 XRN1Q8IZH2 1706 aaKnown RBP24.98■■□□□ 1.59
RBFOX1-207ENST00000547338 PIP4K2BP78356 416 aa24.98■■□□□ 1.59
RBFOX1-207ENST00000547338 PROSER2Q86WR7 435 aaPredicted RBP24.98■■□□□ 1.59
RBFOX1-207ENST00000547338 METP08581 1390 aa24.98■■□□□ 1.59
RBFOX1-207ENST00000547338 ZNF316A6NFI3 1004 aaPredicted RBP24.96■■□□□ 1.59
RBFOX1-207ENST00000547338 IFT172Q9UG01 1749 aa24.96■■□□□ 1.59
RBFOX1-207ENST00000547338 RPGRIP1LQ68CZ1 1315 aa24.96■■□□□ 1.59
RBFOX1-207ENST00000547338 SCAF1Q9H7N4 1312 aaKnown RBP24.92■■□□□ 1.58
RBFOX1-207ENST00000547338 ANKRD30BQ9BXX2 1392 aa24.92■■□□□ 1.58
RBFOX1-207ENST00000547338 AMOTL2Q9Y2J4 779 aa24.91■■□□□ 1.58
RBFOX1-207ENST00000547338 VGFO15240 615 aaPredicted RBP24.91■■□□□ 1.58
RBFOX1-207ENST00000547338 HSPA1LP34931 641 aa24.91■■□□□ 1.58
RBFOX1-207ENST00000547338 RGL3Q3MIN7 710 aa24.88■■□□□ 1.57
RBFOX1-207ENST00000547338 NCOA3Q9Y6Q9 1424 aa24.88■■□□□ 1.57
RBFOX1-207ENST00000547338 ADGRF5Q8IZF2 1346 aa24.88■■□□□ 1.57
RBFOX1-207ENST00000547338 DIEXFQ68CQ4 756 aaKnown RBP24.85■■□□□ 1.57
RBFOX1-207ENST00000547338 MSH6P52701 1360 aa24.85■■□□□ 1.57
RBFOX1-207ENST00000547338 SIPA1L2Q9P2F8 1722 aaPredicted RBP24.84■■□□□ 1.57
RBFOX1-207ENST00000547338 FAM135BQ49AJ0 1406 aa24.83■■□□□ 1.57
RBFOX1-207ENST00000547338 PRAG1Q86YV5 1406 aa24.82■■□□□ 1.56
RBFOX1-207ENST00000547338 ASXL1Q8IXJ9 1541 aa24.81■■□□□ 1.56
RBFOX1-207ENST00000547338 ROBO1Q9Y6N7 1651 aa24.81■■□□□ 1.56
RBFOX1-207ENST00000547338 PIK3C2GO75747 1445 aa24.81■■□□□ 1.56
RBFOX1-207ENST00000547338 TIMELESSQ9UNS1 1208 aa24.81■■□□□ 1.56
RBFOX1-207ENST00000547338 NRXN1Q9ULB1 1477 aa24.8■■□□□ 1.56
RBFOX1-207ENST00000547338 ROBO2Q9HCK4 1378 aa24.78■■□□□ 1.56
RBFOX1-207ENST00000547338 PTCH1Q13635 1447 aa24.78■■□□□ 1.56
RBFOX1-207ENST00000547338 MYOM2P54296 1465 aa24.77■■□□□ 1.56
RBFOX1-207ENST00000547338 NALCNQ8IZF0 1738 aa24.77■■□□□ 1.56
RBFOX1-207ENST00000547338 C19orf44Q9H6X5 657 aa24.76■■□□□ 1.55
RBFOX1-207ENST00000547338 SLAIN2Q9P270 581 aa24.76■■□□□ 1.55
RBFOX1-207ENST00000547338 ADGRL3Q9HAR2 1447 aa24.74■■□□□ 1.55
RBFOX1-207ENST00000547338 DCCP43146 1447 aa24.73■■□□□ 1.55
RBFOX1-207ENST00000547338 C14orf37Q86TY3 774 aa24.73■■□□□ 1.55
RBFOX1-207ENST00000547338 TECPR2O15040 1411 aa24.7■■□□□ 1.54
RBFOX1-207ENST00000547338 CADPS2Q86UW7 1296 aa24.69■■□□□ 1.54
RBFOX1-207ENST00000547338 MST1RQ04912 1400 aa24.69■■□□□ 1.54
RBFOX1-207ENST00000547338 KNDC1Q76NI1 1749 aa24.68■■□□□ 1.54
RBFOX1-207ENST00000547338 TMEM132EQ6IEE7 984 aa24.67■■□□□ 1.54
RBFOX1-207ENST00000547338 C14orf93Q9H972 538 aaKnown RBP24.67■■□□□ 1.54
RBFOX1-207ENST00000547338 MED1Q15648 1581 aaPredicted RBP24.67■■□□□ 1.54
RBFOX1-207ENST00000547338 LRPPRCP42704 1394 aaKnown RBP24.67■■□□□ 1.54
RBFOX1-207ENST00000547338 ATF3P18847 181 aa24.66■■□□□ 1.54
RBFOX1-207ENST00000547338 LAMC1P11047 1609 aa24.66■■□□□ 1.54
RBFOX1-207ENST00000547338 DISP3Q9P2K9 1392 aa24.65■■□□□ 1.54
RBFOX1-207ENST00000547338 CFAP70Q5T0N1 1121 aa24.65■■□□□ 1.54
RBFOX1-207ENST00000547338 ABCC11Q96J66 1382 aa24.64■■□□□ 1.53
RBFOX1-207ENST00000547338 YTHDC2Q9H6S0 1430 aaKnown RBP24.63■■□□□ 1.53
RBFOX1-207ENST00000547338 COL16A1Q07092 1604 aaPredicted RBP24.63■■□□□ 1.53
RBFOX1-207ENST00000547338 PHLPP1O60346 1717 aa24.63■■□□□ 1.53
RBFOX1-207ENST00000547338 ADGRB1O14514 1584 aa24.62■■□□□ 1.53
RBFOX1-207ENST00000547338 AHDC1Q5TGY3 1603 aaPredicted RBP24.62■■□□□ 1.53
RBFOX1-207ENST00000547338 PLEKHH1Q9ULM0 1364 aa24.61■■□□□ 1.53
RBFOX1-207ENST00000547338 BRINP3Q76B58 766 aa24.61■■□□□ 1.53
RBFOX1-207ENST00000547338 STK26Q9P289 416 aa24.61■■□□□ 1.53
Retrieved 100 of 20,778 RNA–protein pairs in 16.3 ms